LOCUS       XM_023919841            6450 bp    mRNA    linear   VRT 07-FEB-2018
DEFINITION  PREDICTED: Cyanistes caeruleus testis and ovary specific PAZ domain
            containing 1 (TOPAZ1), partial mRNA.
ACCESSION   XM_023919841
VERSION     XM_023919841.1
DBLINK      BioProject: PRJNA432745
KEYWORDS    RefSeq.
SOURCE      Cyanistes caeruleus (blue tit)
  ORGANISM  Cyanistes caeruleus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Paridae; Cyanistes.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_019776259.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Cyanistes caeruleus Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..6450
                     /organism="Cyanistes caeruleus"
                     /mol_type="mRNA"
                     /isolate="BT333_1"
                     /db_xref="taxon:156563"
                     /chromosome="2"
                     /map="unlocalized"
                     /sex="male"
                     /tissue_type="blood"
                     /geo_loc_name="Germany: Westerholz"
                     /collection_date="2012-04-01"
                     /collected_by="Jakob Mueller"
     gene            <1..6450
                     /gene="TOPAZ1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 6 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:111923886"
     CDS             <1..3516
                     /gene="TOPAZ1"
                     /codon_start=1
                     /product="testis- and ovary-specific PAZ domain-containing
                     protein 1"
                     /protein_id="XP_023775609.1"
                     /db_xref="GeneID:111923886"
                     /translation="

EGDVTERSLSVTVQNATVKQKDKNEGNVTNRNLSVAAQNGKIKQKDKNEGDLTNRNLTVTLQSGTIQQDKDEGVVTNGNLSVTIQNGRIKQDKDEELVTNRNLSVTVQNDTTKQKGKNEAEVTNRNLSGTVQNGTSTSNTNSINFSPKVSVVNQKLSDLNLIKPLTSGNLTKFKIPLCRKKPKSKKLESVHSFESKTCSPLELLESTSPERQKTGEGTFLVKSEQGPLPVVSDAASPPFIQKKADEIDSKDFQQNGAVNLSDEMSVLSESFSAYPHPLLDGQPEPSVPDFYGTECVLKSSFPDHSLNAVDHLVGLEINDDRKSRRNFSQHKNQNLPDILEAYNQDVLVIDVIQDDPDLFGTSNEEALAPARCENCPVKASPANGIKDAKEYIKPESPIASEKMYSVESSFRCMQESGMSSDTENSCNLVLKAEDVNTHNSSRGSSPSGDVTEDFLKDRQQSKLDELLTSLDMDEKFKLADGVPDAEDENKTEAEKSDCKCKVNSELLSELPLNDQEANLFSEASEMKSWANGYKSSGRSTLVPLKDCGVFEPWKMEKSAVASHSVQQILDALNLPRKYCRYYFMTSRGCERTKCWFSHVPVQGDEKICMAILRTYISIKESGLLRRAVQIFVQYYKEVTPGMDFASEVLNDLLVSLLNNCLLQEVFQILNVIVQIKILPAVDVLLKVFEHVASLNIRNAVPTLINIFCKLIGAGMFLELEHFDYIIKLLQQLQVSSWEMTTVLNIKSRFEERYFEKTWIFDFNLAVAEIQHCKEKRDWTKLGALYLNARTGCEHFDDLQKLFVSIAEILAKDSETDRPGVPFCDFADTVVKNSHHNKADRLFIGRTGISVMYSYHKVLQWIKGRKVLDKLHELQIDFTLLKGLVGAGKSASRCQIVNKAAEIFLHSGNLDGATRVLRESEWITDAPLWPCNKMDILNRHNLLCAIVHKYLRKSLYRQAFEVLQNLPGLQKHSDIVNASQYSSLFNKLINACFENKNLGVSSSAVDFMLSKKIAIDFALLRGLITALGRSSLWSKARSYYKNALSLGCYPELQGNFYHKVLKIPSYLSEVEMLLTIEIFLVSNASDIQSSRNTSQTLQIILKRYEDTGQNNNAYHEAVERLIQAVRLSDPKLFLKHMTMNVNMEEVYSLEHSSALKWLQENMKWAEKVWLFQ"

     misc_feature    2305..2832
                     /gene="TOPAZ1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:464250"
ORIGIN      

gaaggagatgtaacagaaagaagcctgtctgtgacagtccagaatgctacagtaaaacaaaaggataaaaatgaaggcaatgtgacaaatagaaatctgtctgttgcagcccagaatggtaaaataaaacaaaaggataaaaatgaaggcgatctgacaaatagaaacctgactgtgacactccagagtggtacaatacaacaagataaagatgaaggagttgtgacaaatggaaacctgtctgtgacaatccagaatggtagaataaaacaagataaagatgaagaacttgtgacaaatagaaacctgtctgtaacagtccagaatgacacaacaaaacaaaagggtaaaaatgaagcagaggtgacaaacagaaacctgtctgggacagtccagaatggtacttctacaagtaacacaaacagtataaacttcagccctaaagtatcagtagtgaaccagaaattatctgatttaaacctaattaaaccattaacatctggaaacctgacaaaattcaaaattcctttatgcagaaagaaacctaaatccaagaaactggaatctgtccattcatttgaaagcaaaacttgtagtccactagagcttcttgaaagcactagtccagaaaggcagaagacaggtgaagggactttcttggtaaaatctgagcagggtcctcttcctgtggtgagtgatgctgcatctccacctttcatacagaaaaaagcagatgagatcgacagtaaggacttccagcagaatggcgctgtgaatctctctgatgagatgtccgtgctctctgaaagtttttctgcgtatccacatcctcttcttgatggacagccagagccatctgtacctgatttctatggtactgaatgtgtgctgaaatctagttttcctgatcattctttgaatgcagtcgaccaccttgttgggttagaaataaatgatgatagaaaatcaagacggaatttttcacaacacaaaaatcaaaatttaccagatatccttgaagcttacaaccaagatgttcttgtcattgatgtgattcaggatgaccctgacctttttggaaccagtaatgaagaggcgcttgcacctgcacgctgtgaaaattgtccagtgaaagcgtcccctgcaaacggcattaaagacgcaaaggaatatattaagcctgagtctcccattgcctcagaaaagatgtattcagtagagagtagttttagatgcatgcaagaatctggaatgtcaagtgatactgaaaattcttgtaatttggtgttaaaagctgaagacgtgaacacccacaattcttccagaggaagcagtccttcaggagatgtgactgaggactttcttaaagataggcaacagagcaaactagatgaacttttgacaagtttggacatggatgaaaagttcaagcttgcagatggggtgcctgatgctgaagacgaaaacaagactgaagctgaaaaaagtgactgtaaatgcaaagtgaacagtgaattgctatcagaattgccattgaatgaccaagaagcaaatctcttcagtgaagcttcagagatgaaatcttgggcaaatggttacaaatcttcaggaagaagtactttagtgccattgaaggattgtggagtttttgagccatggaagatggagaaaagcgcagttgcttctcattcagtccagcagatccttgatgcacttaacttgccccgtaaatactgcagatactatttcatgacttcacgtggctgtgaaagaacaaagtgttggttctctcatgttccagtacaaggggatgaaaagatttgtatggcaattcttaggacatacattagtatcaaagaatcaggtctcctaagacgtgcagttcaaatatttgtgcagtattacaaagaagttactcctggtatggattttgcttctgaagtgctgaatgatcttcttgtttcattgctcaacaactgtttgttgcaggaagtattccaaatattgaatgtaattgtacaaatcaagatactgccagctgtagatgttcttctgaaagtttttgagcatgtggcttctttgaatataagaaatgctgtgcctacgttaatcaatatcttttgtaagctcattggtgctggtatgttccttgagttggaacactttgactacattattaagttacttcagcaattgcaagtttccagttgggaaatgactactgttttgaacataaaatccagatttgaggaaagatattttgaaaagacatggatttttgacttcaacttggctgtagctgaaattcagcattgcaaggaaaaaagggactggaccaagctaggagctttgtatcttaatgcaagaactggatgtgaacattttgatgatcttcagaaattgtttgtatctattgctgaaattctagccaaagattctgagacagacagaccaggagtccctttttgtgattttgctgatacagtagtgaaaaattcacaccataataaagcagacaggcttttcattggaaggactgggataagcgtaatgtattcgtatcacaaagtactgcagtggataaagggaaggaaggttttggataaactgcacgagctacagatagattttacactcttgaaaggacttgtaggtgcagggaagtcagcatcgagatgtcagattgttaataaagctgcagaaatctttcttcattctggaaatttggatggagcaacaagggtattgagagagtcagagtggatcacagatgcaccgttgtggccctgtaataaaatggacatcctcaatcgacataatctattatgtgcaatagtgcataaatacttgaggaagagtttgtacaggcaggcatttgaagttctgcagaacttaccaggtttgcagaaacattctgatattgtaaatgcttctcaatacagcagcctttttaacaagctgataaatgcctgttttgagaacaagaaccttggggtctcgtcttctgcagtagacttcatgctttccaaaaagattgctattgattttgctttacttagaggattaatcacagctttgggaagaagttctttatggtccaaagctaggtcctattacaaaaatgctttatcattgggttgctacccagagctgcagggaaatttttatcacaaagttctgaagattccatcatacctatctgaagttgagatgctgttgaccattgaaatatttcttgtttcaaatgctagtgatattcaaagttcaaggaatactagtcagactcttcagataatactgaaaagatatgaagatacaggtcagaataacaatgcctatcatgaggcagtggagaggctgatccaggcagttcgtttatctgatccaaagctttttcttaagcatatgaccatgaacgttaatatggaagaagtttacagcctggagcattcatctgctttaaaatggcttcaagagaatatgaaatgggctgagaaggtctggctgtttcagtagttactaaatagtttccactctgttcggattgtgccttactgatttacagcaaggtttcaaactcaagttgtggttttaaatactatattgatgataatgaagatagtagcacagaaagagtaatggtttttttataaactgtcacactgacctgtatagatgtttggcagtggcatcaccagataatgaagaagctgcagcctcagaacctacgttcaccattcttacaaagaattaacacttagcttgtttctcccagcaggtaattctataagtgtagtataagcataggtgcaagtgtaggtaagtgcattggttgagtgtatctactgttcttgagtgagacattttccacattcattcatagtctgtagaagtaatacctgtttcctgttgtctgcctcacagtaacttgtgaggtcactgttcacaccttagatcttattttttttctccaaaagcccaataaaaagcactgagaataaaataacttcacaattgcttgagacatgcctgacttaggatatctttcttcacagaactgagagcctacatgttgctcacagctgaaggtttagttgataatttaattagatatttatttgatataggtaatagcttgtgtatggtttcacatttctgtatatgcacttccactgcaaaggaaaacttgctttctcccttgattgtgctcttagagagaggtgggtttgcccatcttttagcttctgccaacttcatgatgagatggagacttctagcaagcttgttccaccattcctggttcttcaggatttctgcttttttccacctgaaaatcctgaatcacattcaaagcatgaattgcttgagtcaaactctacagcctgagtaagaagaaccaaacatttaataccagaaaaatctctcacggtgaaacaatacagcaacaatacaatacaatacaaaattgatacttaatgtacttgccacttttgtagtgttgttagtttagttctctggcagcaaccttcacaaacttgccagtaatacagctcttgtggccctgctctccatccattttaaagccttttgttcttaagctcttttgggtataaaagttcatgagtttttaggttgttccatcataagtgagattaagatgatggcacaggacctcagtgtttgaaaaatatctctgctttggggtagcataagtctcttcccagttcctgcagcattattgcaggtgtcctttgcagctctaaatcatgaaagccatcatgaccttagttctggatggttgtgtggagggttttggtatcagggtttttctctttgggggaggttgccactccagtcttggggctttatgccattaatctgatgtcatgaatctgatcaccagttgttggattcctgacctcctcagggccaggtccttacctttttcaatactttttctcatccagtctgttaggatgttgctgctggaagagaggggattgaatctgatgaccaccaagattactactttgctcctgtgccacctgtacagaaaaatgctaggatagaggctgttgtcttctcacagggtatcattcttttgtagagatcatcttgcctgccttgtaaaaaatggtaaatccactaccaatggtgctatatggcatttctgtaggagccattcacctcagtgtacagttggcactggtccaaacaaactctgggttctgccccttcacattcatgaagatggttctgccatttataagggtatccacctgatcaaatccaactggattctgctgattttgcttctcagtagctgaaagactgggtgagtagtaatcaggtttcaggtgatggatctaaactgatgctcttgcaaccactccagcattagtgaaaaaagcaattttagaagattccaacaaactaaaacgggtagtaagaaacagagaaatttttggtaattagttcttctaagatcctttgtgtcttaatcttcattggaattagacagaggctatctgaccctcagctaaatcccatgtttctgtgagaggtatccaatgtggccaatagtgtgtttgacagacatagaaggacaaaattctctttgtaatttgtatggcttcaaaacttgggatgttctagagacagcggaattttttcctctgtaagcaaccttgaattttcacttagatcttccccagaacaaaactccaaatgttgctttatttttcagacagaggttaatcattgaccctcaagcttaacttggaaccgtgtaaaatttttgcaatgttttggctccatctcctgagtatcatcttcagctgataggatgtaatctcagtcatgttttatattaacaagcaaagcaagcttcccacatccttgctcagaagctttattacaagcgaggcttctggtgtttgtttcaatagagtttctccctgtatcaccatgataaaccagtatgcagttggaccaactttgctgttaagtcctgtatttcacatttttgttctgtctgggtccacatgaaatacagtgcaaatatcatcattttgatttgtatcagaaggccagaaaggtttcttgagtaacattctcggtattttggtaacagaaattccatgtgccaaacaggacaaaactccactgtggaatggaaacaagcctggaaagatggaaaaaatatcctgaagaataaagttgagtacaacagaggcaatgcagttttgcagagccagcccctcagtagacaatagccacacttttgctttttcccagtgtaagttaagctgaaagaacttctgtttcacattaagcaccttatttggtataatttttcatataggaaataaaatgtatgcttacctgtttgcagagagagacagaaaaatgtgcaaataaaaacttccatgtgctgtgctcagtagctca

//