LOCUS       XM_020621991            3878 bp    mRNA    linear   VRT 12-JUN-2025
DEFINITION  PREDICTED: Monopterus albus NRDE-2, necessary for RNA interference,
            domain containing (nrde2), mRNA.
ACCESSION   XM_020621991
VERSION     XM_020621991.1
DBLINK      BioProject: PRJNA380265
KEYWORDS    RefSeq.
SOURCE      Monopterus albus (swamp eel)
  ORGANISM  Monopterus albus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae;
            Monopterus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_018128150.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_001952655.1-RS_2025_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/12/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3878
                     /organism="Monopterus albus"
                     /mol_type="mRNA"
                     /db_xref="taxon:43700"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="China"
     gene            1..3878
                     /gene="nrde2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins, and 99% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:109972830"
     CDS             33..3605
                     /gene="nrde2"
                     /codon_start=1
                     /product="protein NRDE2 homolog"
                     /protein_id="XP_020477647.1"
                     /db_xref="GeneID:109972830"
                     /translation="

MALFPAFAEDARNKVEDSSKELDWLNNKSFQTGDALSLHGRFLEEKDSSVGREVSSDEEKEEEDNVPPKKKKKKSEKKRKKKKKHKKKSGRYSGSSGSDSETIYPSDLQREHEADRPQAAPLASHFSWLDDLQSATEQPFCVDCKPDPSNWTYKSLYRGDVTRYKRKGSSSLGLDPRRQEVSWEESESSKKQKGVDKKKTADRYFSTVSRQLLKAEPPVLTLPTIPECSDVIKSTPFLPLGDDKETKGGETGDRVQTSSLNPLGVYDSSTALWLQGKGQQGQQKQDPETGQSAVLLAGKTEDFNRRLREQPADTQLWMKFIQYQDELSSTVFAGEEGQQDSNSAERHKSSYRAVLEKKLSIAERAVATNPGCIALQLERLRICQELWEPSVLAKEWKKMVFLHPNSAPLWLEYLLFTQTYFSNFTVSKVNSAYGKCLSTLSAVRDGSMVSHPALPGTEQDMLGXXIKQCHFLRQSGHSEKAISLFQAMIDFTFYKPDNVRELSTKQQVEFFEPFWDSGEARVGELGARGWKAWMLQQERGGWLQPSAEEEEEEEEDEEEVKDRSQPRWTVWLDVESSREAADWLPWRPDKAKGQSEEDCEDPDRQVLFDDIGPSLICLSSPELQLHLLLHFLSFLGLPVNSVLSAAPCHSGLLLENLSLLTQGTDILRPLTSYDLPDLGVNAVGHMTTLQGTRKWAGLVKQGEKFVTNVFNMVQAVLPAHHRAVLSLSWMQYEKLKVLCCLRCGNKKRLRFQGKSSKRVAKRLLKEPENRSSLVLWREYAHLEWMLGNIDEARKVFSTATAIGGTKALSSPSLCELCLLWAHLEIENEAGVRGRVPPDVTSSPAVSVLTRLAEGTSALCPSSSQPVSPVSILKARRSYEQALTASLSALNEDPNSPQTSRKGQEDLLGEKLMLRGLVSCYALFQYLTVGIQAANTVYSQARERMEELHRTLTPDKQPSLASTDTTEADYSYTSRHYINRLACECEVVAVQQAALLRYHSSISVFPLATLRNTLCSALSTWPTSTPLWSIYVQVENRYHSAGRARRFFYSITRNNSSVVPHLFAIVAEQQRKQLVDAAQRSCHDAALPILPECGLGNRIRGLFESAIATEMGAHCPLLWRMYMHFLVSEGKVDKATGIFYRALQNIPWTKSLYMDAVQLFPDRLQEFVDLMTEKELRLRLPLEELDILLED"

     misc_feature    447..758
                     /gene="nrde2"
                     /note="MTR4-interacting domain (MID) found in nuclear
                     exosome regulator NRDE2 and similar proteins; Region:
                     NRDE2_MID; cd22200"
                     /db_xref="CDD:412062"
     misc_feature    order(447..473,480..485,495..500,504..506,510..554,
                     561..569,588..596,615..623,633..638,642..647,654..674,
                     699..710,729..758)
                     /gene="nrde2"
                     /note="MTR4 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:412062"
     misc_feature    939..1898
                     /gene="nrde2"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:462472"
ORIGIN      

ttcctgcgactgtttttgtgcaacatattaggatggctctctttccagcttttgcagaagacgcaagaaacaaagtagaagattcgtccaaagaattagactggctgaacaataagagttttcagaccggggatgctctctctctacacggtcgttttttagaggagaaggactcgagtgtaggcagagaggtgagttctgatgaggagaaggaagaagaggacaatgtgccacccaaaaagaagaaaaagaagagtgaaaagaaaagaaagaagaagaaaaaacacaaaaagaagagtggcaggtattcaggcagcagtgggtctgactctgaaaccatctaccccagtgaccttcaaagggaacatgaggcagataggccccaggctgctccattagcaagtcatttctcctggttggatgatctccagtcagccacagagcagccattctgtgtggattgtaaaccagacccatccaactggacttacaagtcactgtacagaggagatgtaacaaggtataagaggaaaggcagctcgtcactgggtctggaccctcgcagacaggaagtcagctgggaagagtcagagtcaagtaagaagcagaaaggtgtggacaagaagaaaacagcagacagatacttctctactgtcagccgccagctgctgaaggctgagccccctgttcttacattaccaacaattcctgagtgcagtgatgtcatcaaatccacccccttcctcccactgggtgatgacaaggaaacgaaaggaggagagacaggtgacagagtgcagacgtcatcattaaatcccctcggtgtgtatgactcctctacggccctctggctgcaggggaaaggacagcagggccagcagaagcaggacccagaaacggggcagagtgctgtgcttctggctggaaagactgaagactttaacagaaggcttagagagcagccagcagacacacaactctggatgaaattcatacagtaccaggatgagctgagttcaacagtgtttgcaggcgaggagggacaacaagacagcaattcagctgaaaggcacaagtcctcctaccgagctgtcctggagaaaaagctgagcatcgcagagcgtgccgtggccaccaaccctggttgcatagctctgcagctggaaaggcttaggatctgccaagagctctgggagccctcagttctggcgaaagagtggaagaaaatggtgttcctccacccaaacagcgcccccttgtggttggagtatctgcttttcactcagacctactttagcaacttcactgtgtcaaaagtcaactctgcctacgggaagtgcctgagcacactcagcgctgtgagggatggcagcatggtctctcaccccgccttgccagggactgagcaggatatgttgggnnnnnnnatcaaacagtgccatttcctgcgtcagtctggtcactcagagaaggcgatttctctgtttcaggccatgattgattttactttctacaagcctgacaatgtacgagaactgtccaccaagcagcaggttgagttctttgagccattctgggacagtggggaggcaagggttggggagctgggggccagaggctggaaagcctggatgcttcagcaagagcgaggagggtggctacagcccagtgcagaggaagaagaagaggaggaagaggatgaggaggaggtgaaggatcgaagccagcccagatggacagtgtggctggatgtggagtcgtctcgcgaagcagctgactggctgccctggaggcctgacaaagccaagggccaatcagaagaggactgtgaagacccagacagacaggtgttgtttgatgacatcggtccatcgctaatttgtctatcttcaccagagcttcagctccatcttcttctccatttcttgtcattcctggggctgcctgtgaactctgtgctctctgctgccccttgtcattctggcctgctgctggagaacctttctctgctcactcagggtactgacatactgcgtcctctgacctcttatgacctacctgacctcggggttaacgctgtaggtcacatgaccactctccaaggaacaaggaagtgggcggggcttgtaaagcagggtgaaaagtttgtcacaaatgtgttcaatatggttcaagctgtccttcctgcacatcaccgagctgtcctttcactcagctggatgcagtatgagaaactcaaggtcttgtgctgcctacgctgtggcaacaaaaagcgtctccgctttcaaggcaagagcagcaaacgggttgccaaaagactgctcaaagaacctgaaaaccgctcgtcattggtgctatggcgggagtatgcccacctggagtggatgctgggcaacatcgatgaagctcgcaaagtgttctccacagctacagcaatagggggaaccaaagcgctcagcagccccagcctctgtgagctgtgtcttctgtgggcacacctggagatagagaatgaagcaggtgtacgaggacgggtgccacctgatgtaacctcttctccggctgtctcagtactaaccaggctagcagaaggaacctcagcattatgcccttcatcctcccagcctgtttccccggtttccatcctgaaagccaggagatcatatgaacaggctctaacagccagtttgtcagcactgaacgaggaccctaacagccctcagaccagcagaaaaggtcaagaggacctactgggagagaaactgatgctgagaggcctggttagctgctatgctctgttccagtacctcacagtgggcatccaagcagcgaacaccgtctacagccaggctagagaaaggatggaggaactgcatcgtacattaacaccagacaagcagcccagccttgctagcactgatactactgaggctgattacagttacaccagcaggcactatatcaacaggctagcttgtgagtgtgaagtagtagcagtacagcaggcagccttgctgaggtaccacagcagtatcagtgtgtttcccttggcaacactgagaaacactctgtgttctgccctctccacctggcccaccagcactcctctctggagtatatatgtccaagtggagaaccgttaccatagcgctggccgagcacgtcgatttttttactctattaccaggaacaacagcagtgtggtgccacacctctttgccattgttgctgaacagcaaaggaaacagctggtggacgctgctcagaggtcttgtcatgatgctgccttgcccatcttgccagagtgtggccttggcaaccggatccggggactgtttgaaagtgccattgcaacagaaatgggtgctcactgtcctttactttggaggatgtacatgcacttcctggtgtcagaaggaaaggtggataaagccacagggatcttctacagggccttgcagaatattccctggactaagagtttatacatggatgcagtgcagctgttccctgaccgtctgcaggagtttgtagatctgatgacggagaaagaactccgacttagactgcctttagaagaactggatatacttctggaagactaaacacacacaggcttcattcaagagagcactttaagtttagtttactggcaacatgccaacccacatattggctcagttatgggaacaagagacacacacaaactgagatgggtacacaaacatagctgctgtattgaaaaactacattgcagtgatctggatctcttctaaagagaaggagggggggccatcatcatggctgaaaatgctttattttgatatgaactgagctgtgttttagtacctgacatctttaataaacagaattctcat

//