2025-04-03 20:24:16, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_020265802 1101 bp mRNA linear PLN 28-AUG-2017 DEFINITION Talaromyces atroroseus Protein disulfide-isomerase tigA (UA08_03495), partial mRNA. ACCESSION XM_020265802 VERSION XM_020265802.1 DBLINK BioProject: PRJNA374571 BioSample: SAMN03339010 KEYWORDS RefSeq. SOURCE Talaromyces atroroseus ORGANISM Talaromyces atroroseus Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces; Talaromyces sect. Trachyspermi. REFERENCE 1 (bases 1 to 1101) AUTHORS Rasmussen,K.B., Rasmussen,S., Petersen,B., Sicheritz-Ponten,T., Mortensen,U.H. and Thrane,U. TITLE Talaromyces atroroseus IBT 11181 draft genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 1101) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (28-AUG-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1101) AUTHORS Rasmussen,K.B., Rasmussen,S., Petersen,B., Sicheritz-Ponten,T., Mortensen,U.H. and Thrane,U. TITLE Direct Submission JOURNAL Submitted (24-JUN-2015) DTU Systems Biology, Technical University of Denmark, Soeltofts Plads 223, Kgs. Lyngby 2800, Denmark COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_017971435). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1101 /organism="Talaromyces atroroseus" /mol_type="mRNA" /strain="IBT 11181" /isolation_source="plant fruit food product" /host="Capsicum annuum" /db_xref="taxon:1441469" /chromosome="Unknown" /geo_loc_name="Denmark" /lat_lon="55.77198 N 12.50519 E" /collection_date="17-Dec-1990" gene <1..>1101 /locus_tag="UA08_03495" /db_xref="GeneID:31003250" CDS 1..1101 /locus_tag="UA08_03495" /note="GO_component: GO:0005783 - endoplasmic reticulum; GO_function: GO:0016853 - isomerase activity; GO_process: GO:0008152 - metabolic process; GO_process: GO:0045454 - cell redox homeostasis" /codon_start=1 /product="Protein disulfide-isomerase tigA" /protein_id="XP_020121592.1" /db_xref="GeneID:31003250" /db_xref="InterPro:IPR005788" /db_xref="InterPro:IPR011679" /db_xref="InterPro:IPR012336" /db_xref="InterPro:IPR013766" /db_xref="InterPro:IPR017937" /translation="
MARLSFIVSCLALFVSIVSAASAVLDLLPSNFDKIAVNSGKFTMVEFFAPWCGHCKNLAPVYEELAQAFAFSDKIQIAKVDADEHRDLGKAYNIQGFPTIKYFDGKSSKAQEYDGGRDIEALTAFVTEKTGVRPKSVQKPASSVEMLTESTFKDFVGTDKNVFVAFTAPWCGHCKKLAPTWEDLAVDFARDENVVIAKVDCEAENSKSLAKEFGVTGYPSIKFFPAGSSEPVTYQGGRSEEVFVKYINEQVGTHRVVGGGLDEKAGTIPTLDSLVAKYVPTKSFVKLSEEITKTAKNLQEQYVQYYIRVTDKLKESEGYVTKEIARLGKILSKGGLAPEKVDDLTSRSNILRQFLGGETEETKDEL"
misc_feature 67..378 /locus_tag="UA08_03495" /note="PDIa family, endoplasmic reticulum protein 38 (ERp38) subfamily; composed of proteins similar to the P5-like protein first isolated from alfalfa, which contains two redox active TRX (a) domains at the N-terminus, like human P5, and a C-terminal domain...; Region: PDI_a_ERp38; cd02998" /db_xref="CDD:239296" misc_feature order(154..156,163..165,349..351) /locus_tag="UA08_03495" /note="catalytic residues [active]" /db_xref="CDD:239296" misc_feature 439..753 /locus_tag="UA08_03495" /note="protein disulfide-isomerase domain; Region: pdi_dom; TIGR01126" /db_xref="CDD:273454" misc_feature order(511..513,520..522,712..714) /locus_tag="UA08_03495" /note="catalytic residues [active]" /db_xref="CDD:239296" misc_feature 796..1062 /locus_tag="UA08_03495" /note="Endoplasmic reticulum protein ERp29, C-terminal domain; Region: ERp29; pfam07749" /db_xref="CDD:462253" ORIGIN
atggctcgcttgagcttcatcgtgagctgtctcgcgctcttcgtgagcattgttagcgctgcgtccgccgttcttgacctgcttccctccaattttgataaaatcgccgtcaactccggaaaattcacaatggtcgagttctttgcaccctggtgtggtcactgcaagaaccttgcccccgtctatgaggaactcgcgcaggcgtttgcgttctccgacaagatccagatcgccaaggtggatgccgacgagcaccgtgatctaggaaaggcatacaacatccagggcttcccaacaatcaaatatttcgatggcaagagctctaaggcccaagagtacgacggtggtagggacattgaggccttgactgctttcgttactgagaagaccggtgttcgccccaagagcgttcaaaagccagctagcagcgttgagatgttgacggagtcaactttcaaagactttgttggtaccgataagaatgtttttgttgctttcactgctccttggtgtggacactgcaagaagcttgctccaacctgggaggaccttgccgtcgatttcgctcgcgatgagaacgtcgttattgctaaggttgactgcgaggccgagaactccaagtcccttgctaaggaattcggagtcacgggctacccaagcatcaagtttttccccgccggctcatctgagccggttacataccagggtggtcgctccgaggaagtcttcgtcaagtacatcaacgagcaagtcggaacccaccgtgttgtcggcggcggtcttgacgagaaggccggcactatccctacccttgactcgctcgttgccaagtacgtgcctaccaagagcttcgttaagctctcggaagagatcacgaagactgccaagaacctccaggagcagtatgtccagtactacatccgggtcactgataagttgaaggagagcgagggttacgtcaccaaggagattgctcgtttgggaaagattctttccaagggcggtcttgctcctgagaaggttgatgatttgacttctcgcagcaacattctccgtcaatttttgggaggtgagactgaagagaccaaggacgaactatag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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