2024-04-26 08:14:46, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_020213128 474 bp mRNA linear PLN 15-FEB-2017 DEFINITION Cyberlindnera jadinii NRRL Y-1542 ribosomal protein L36e mRNA. ACCESSION XM_020213128 VERSION XM_020213128.1 DBLINK BioProject: PRJNA374042 BioSample: SAMN02616005 KEYWORDS RefSeq. SOURCE Cyberlindnera jadinii NRRL Y-1542 (Candida utilis NRRL Y-1542) ORGANISM Cyberlindnera jadinii NRRL Y-1542 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Cyberlindnera. REFERENCE 1 (bases 1 to 474) AUTHORS Riley,R., Haridas,S., Wolfe,K.H., Lopes,M.R., Hittinger,C.T., Goker,M., Salamov,A.A., Wisecaver,J.H., Long,T.M., Calvey,C.H., Aerts,A.L., Barry,K.W., Choi,C., Clum,A., Coughlan,A.Y., Deshpande,S., Douglass,A.P., Hanson,S.J., Klenk,H.P., LaButti,K.M., Lapidus,A., Lindquist,E.A., Lipzen,A.M., Meier-Kolthoff,J.P., Ohm,R.A., Otillar,R.P., Pangilinan,J.L., Peng,Y., Rokas,A., Rosa,C.A., Scheuner,C., Sibirny,A.A., Slot,J.C., Stielow,J.B., Sun,H., Kurtzman,C.P., Blackwell,M., Grigoriev,I.V. and Jeffries,T.W. TITLE Comparative genomics of biotechnologically important yeasts JOURNAL Proc. Natl. Acad. Sci. U.S.A. 113 (35), 9882-9887 (2016) PUBMED 27535936 REFERENCE 2 (bases 1 to 474) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-FEB-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 474) AUTHORS Riley,R., Haridas,S., Wolfe,K.H., Lopes,M.R., Hittinger,C.T., Goker,M., Salamov,A., Wisecaver,J., Long,T.M., Aerts,A.L., Barry,K., Choi,C., Clum,A., Coughlan,A.Y., Deshpande,S., Douglass,A.P., Hanson,S.J., Klenk,H.-P., Labutti,K., Lapidus,A., Lindquist,E., Lipzen,A., Meier-Kolthoff,J.P., Ohm,R.A., Otillar,R.P., Pangilinan,J., Peng,Y., Rokas,A., Rosa,C.A., Scheuner,C., Sibirny,A.A., Slot,J.C., Stielow,J.B., Sun,H., Kurtzman,C.P., Blackwell,M., Jeffries,T.W., Grigoriev,I.V., Nordberg,H.P., Cantor,M.N. and Hua,S.X. CONSRTM DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (23-FEB-2016) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_017963653). ##Metadata-START## Organism Display Name :: Cyberlindnera jadinii NRRL Y-1542 GOLD Stamp ID :: Gp0009554 ##Metadata-END## FEATURES Location/Qualifiers source 1..474 /organism="Cyberlindnera jadinii NRRL Y-1542" /mol_type="mRNA" /strain="NRRL Y-1542" /type_material="type material of Saccharomyces jadinii" /db_xref="taxon:983966" /chromosome="Unknown" gene 1..474 /locus_tag="CYBJADRAFT_135257" /db_xref="GeneID:30987524" CDS 82..381 /locus_tag="CYBJADRAFT_135257" /codon_start=1 /product="ribosomal protein L36e" /protein_id="XP_020072202.1" /db_xref="GeneID:30987524" /db_xref="InterPro:IPR000509" /db_xref="JGIDB:Cybja1_135257" /translation="
MAKSGIATGLNKGRKVEQLEKVPKISYRKGAASKRTTFVRSIVREVAGLAPYERRLMELIRNAGEKRARKVAKKRLGTFSRAKGKVEEINNIIAQSRRH"
misc_feature 91..375 /locus_tag="CYBJADRAFT_135257" /note="Ribosomal protein L36e; Region: Ribosomal_L36e; pfam01158" /db_xref="CDD:426088" ORIGIN
gttggtttgtgaaaaatataatcaaattcacacacaaccgttaacgtttcaaactcagtaatatcaaactacacatcaaaaatggctaagtctggtatcgctactggtctcaacaagggtagaaaggttgaacaattggagaaggtcccaaagatctcttacagaaagggtgctgcttccaagagaaccacctttgtccgttctatcgtcagagaggttgccggtttggctccatacgagagaagattgatggagttgatcagaaacgctggtgagaagagagctagaaaggtcgccaagaagagattgggtactttctccagagccaagggtaaagttgaggagatcaacaacatcattgctcaatcccgtcgtcactaagcatcttttcttctaaatttttaactgaagagattatatcgtttcttttgggtaatgtgttgactttttaatgtaaatttatcgctctcatgg
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@meso_cacase at
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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