LOCUS       XM_018881475             720 bp    mRNA    linear   PLN 07-JAN-2024
DEFINITION  Sugiyamaella lignohabitans Pbn1p (PBN1), partial mRNA.
ACCESSION   XM_018881475
VERSION     XM_018881475.1
DBLINK      BioProject: PRJNA342695
            BioSample: SAMN04417247
KEYWORDS    RefSeq.
SOURCE      Sugiyamaella lignohabitans
  ORGANISM  Sugiyamaella lignohabitans
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Dipodascomycetes; Dipodascales; Trichomonascaceae; Sugiyamaella.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Bellasio,M., Peymann,A., Valli,M., Sipitzky,M., Graf,A., Sauer,M.,
            Marx,H. and Mattanovich,D.
  TITLE     Complete genome sequence and transcriptome regulation of the
            pentose utilising yeast Sugiyamaella lignohabitans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 720)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 720)
  AUTHORS   Peymann,A. and Graf,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2016) Department of Biotechnology, University of
            Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna
            1190, Austria
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_031671).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Sugiyamaella lignohabitans"
                     /mol_type="mRNA"
                     /strain="CBS 10342"
                     /type_material="culture from holotype of Candida
                     lignohabitans"
                     /db_xref="taxon:796027"
                     /chromosome="C"
     gene            <1..>720
                     /gene="PBN1"
                     /locus_tag="AWJ20_4408"
                     /db_xref="GeneID:30036537"
     CDS             1..720
                     /gene="PBN1"
                     /locus_tag="AWJ20_4408"
                     /inference="similar to AA sequence:KEGG_Orthology:K07541"
                     /note="Component of
                     glycosylphosphatidylinositol-mannosyltransferase I;
                     essential component; required for the autocatalytic
                     post-translational processing of the protease B precursor
                     Prb1p; localizes to ER in lumenal orientation; homolog of
                     mammalian PIG-X; GO_component: GO:0005783 - endoplasmic
                     reticulum [Evidence IEA]; GO_component: GO:0005783 -
                     endoplasmic reticulum [Evidence IDA] [PMID 9649520];
                     GO_component: GO:0005789 - endoplasmic reticulum membrane
                     [Evidence IEA,IEA]; GO_component: GO:0016021 - integral
                     component of membrane [Evidence IEA]; GO_component:
                     GO:0016020 - membrane [Evidence IEA]; GO_function:
                     GO:0000030 - mannosyltransferase activity [Evidence IMP]
                     [PMID 15635094]; GO_process: GO:0030433 - ER-associated
                     ubiquitin-dependent protein catabolic process [Evidence
                     IMP] [PMID 16418276]; GO_process: GO:0006506 - GPI anchor
                     biosynthetic process [Evidence IEA,IEA,IEA]; GO_process:
                     GO:0006506 - GPI anchor biosynthetic process [Evidence
                     IMP] [PMID 15635094]; GO_process: GO:0016485 - protein
                     processing [Evidence IMP] [PMID 9649520]"
                     /codon_start=1
                     /product="Pbn1p"
                     /protein_id="XP_018734065.1"
                     /db_xref="GeneID:30036537"
                     /translation="

MVRYPKQHRQLPVSSSYRADFSKPVGLHPKHNLHLSNIESPDQHCRLYSKYTIPKALFVDKYQLADLDRSTAMSTAKGKLIAVWGETDLEAPVWSVDGWGSELLVEIYHNSDIQSSDFTFELPLHSRYEFPQMNSTSVTQNLPWPIVFWVCPDFQQEQRHIGEIKGLGYESLFPDNTLYYHLTPSPEDGDVLSTSFNIPVAPFNQYDRIQWLSVTVLLTATIYILYKIVSNIGRKTKAD"

     misc_feature    70..684
                     /gene="PBN1"
                     /locus_tag="AWJ20_4408"
                     /note="PIG-X / PBN1; Region: PIG-X; pfam08320"
                     /db_xref="CDD:462426"
ORIGIN      

atggtgagatatccgaaacagcaccgtcaattgccagtgtccagttcgtatagagcagacttttcgaaaccagtaggccttcatcctaaacacaatctgcatctctctaatatcgagtcgcccgaccagcactgcaggttatattccaaatataccattcccaaggccctgtttgtggataagtaccaattggccgacctggatcggtcgactgccatgtctacagccaagggcaaactgatagctgtttggggagagaccgatctcgaggctcctgtatggtctgttgacggttggggaagcgagctgctggtggaaatataccacaatagcgatattcaaagcagtgatttcactttcgaactgccgcttcattctcgctatgagtttcctcagatgaacagtacatctgtcactcagaacctgccctggcctattgttttctgggtatgtcctgatttccaacaggaacagcgtcatatcggcgagatcaagggtctaggttatgaatctcttttccctgataacactctttactaccatctgacaccatctcctgaagatggggatgttctcagcacgagtttcaacatccccgtggctcctttcaaccagtacgaccgcattcagtggctgtctgtcacggttctgctcaccgctacgatatacatcctgtacaagatcgtgtcgaatatcggccgaaagaccaaagccgattag

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