LOCUS       XM_018880491            1257 bp    mRNA    linear   PLN 07-JAN-2024
DEFINITION  Sugiyamaella lignohabitans Sil1p (SIL1), partial mRNA.
ACCESSION   XM_018880491
VERSION     XM_018880491.1
DBLINK      BioProject: PRJNA342695
            BioSample: SAMN04417247
KEYWORDS    RefSeq.
SOURCE      Sugiyamaella lignohabitans
  ORGANISM  Sugiyamaella lignohabitans
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Dipodascomycetes; Dipodascales; Trichomonascaceae; Sugiyamaella.
REFERENCE   1  (bases 1 to 1257)
  AUTHORS   Bellasio,M., Peymann,A., Valli,M., Sipitzky,M., Graf,A., Sauer,M.,
            Marx,H. and Mattanovich,D.
  TITLE     Complete genome sequence and transcriptome regulation of the
            pentose utilising yeast Sugiyamaella lignohabitans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1257)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1257)
  AUTHORS   Peymann,A. and Graf,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2016) Department of Biotechnology, University of
            Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna
            1190, Austria
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_031674).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Sugiyamaella lignohabitans"
                     /mol_type="mRNA"
                     /strain="CBS 10342"
                     /type_material="culture from holotype of Candida
                     lignohabitans"
                     /db_xref="taxon:796027"
                     /chromosome="B"
     gene            <1..>1257
                     /gene="SIL1"
                     /locus_tag="AWJ20_3472"
                     /db_xref="GeneID:30035498"
     CDS             1..1257
                     /gene="SIL1"
                     /locus_tag="AWJ20_3472"
                     /inference="similar to AA sequence:KEGG_Orthology:K14001"
                     /note="Nucleotide exchange factor for the ER lumenal Hsp70
                     chaperone Kar2p; required for protein translocation into
                     the endoplasmic reticulum (ER); homolog of Yarrowia
                     lipolytica SLS1; GrpE-like protein; GO_component:
                     GO:0005783 - endoplasmic reticulum [Evidence IEA];
                     GO_component: GO:0005783 - endoplasmic reticulum [Evidence
                     IPI] [PMID 10958688]; GO_component: GO:0005788 -
                     endoplasmic reticulum lumen [Evidence IEA]; GO_function:
                     GO:0000774 - adenyl-nucleotide exchange factor activity
                     [Evidence IDA,IPI] [PMID 10958688]; GO_process: GO:0006616
                     - SRP-dependent cotranslational protein targeting to
                     membrane, translocation [Evidence IGI,IMP] [PMID
                     10958688]; GO_process: GO:0015031 - protein transport
                     [Evidence IEA]; GO_process: GO:0006810 - transport
                     [Evidence IEA]"
                     /codon_start=1
                     /product="Sil1p"
                     /protein_id="XP_018738305.1"
                     /db_xref="GeneID:30035498"
                     /translation="

MKISIILTIIYASHRLISRASGEFVPTNEWQIVEEGEQIPPGLHVRLNFNTGVREAKLLSPEDETDDTDDGLVVVIPNSDVAEDDEKSDLEEYFEELKLSANTPPELSQAIQHIKSQLMLQHDLLQNLADLAHDIEYGTILVNSALPELVNIILNRDQHDVEFRNTAARALGASLRNNPDSLKVALGSKAHVVPRLLKGLQVESDLNVQSRLLYVISACLDDDRGLEQYIQSNGGDIIRKLFQSRGEAAASQPGYLTFQRKCCDLIQDQLINRDDSRNKFQEQREDELKKWASILQQSLIDHSDDHSIEVKYKLFQTLVNIKEIPALSISIEDKFLSWLAEENNSQIAQHKRGKVASGTIRLQSNDDTTAQEGLSPTGEDSDSEYLSIEEKYHHELKRARHLVFGNPKAHRNHLGDDL"

     misc_feature    316..1254
                     /gene="SIL1"
                     /locus_tag="AWJ20_3472"
                     /note="Nucleotide exchange factor SIL1; Region: SIL1;
                     pfam16782"
                     /db_xref="CDD:407047"
ORIGIN      

atgaaaattagcattatactcacaataatttacgcatcacaccgattgatatcgagagcttctggagaattcgttcccaccaatgagtggcaaatagtagaagaaggtgaacaaatccctccagggttacatgtaaggctaaattttaacacaggagtacgggaggccaagctgttatctccagaagatgaaacggacgatacagacgatgggttagtggtagtgattccgaatagtgatgttgctgaagatgatgagaaaagtgatttagaagaatattttgaggagttgaagttgtctgcgaacacacctcctgagttgagtcaagcaatacaacatatcaaatctcaactgatgttgcagcatgacctattgcagaatttagcggatctagcccatgatattgaatatggtaccattcttgttaacagcgcacttccagagctagtcaatattattctaaaccgagatcaacacgatgtcgaatttcgaaatactgcagcacgagcgttgggagcttcgttgcgaaacaaccctgattctcttaaagtcgccctcggctccaaagctcatgttgttcccagactactaaagggtctgcaggttgagtcagatttaaatgttcaatctcgattactgtatgtaatttcagcgtgtcttgacgacgatcgaggcttggagcaatatattcaatcaaatggaggagatattattagaaaattatttcagtctcgaggggaagcagcagcatcacaacctggatatttgacatttcagaggaaatgctgtgatcttatccaggatcaactaattaatagagatgactccagaaacaaatttcaagaacaaagagaagatgaactgaaaaaatgggctagtattcttcagcaatctttgattgaccattcagatgaccatagtattgaggttaaatataagctgtttcagactttggttaatatcaaggagatccccgcgttatcaatttcaattgaagacaagtttttgagctggcttgcagaagagaataattcacaaattgctcagcacaaaaggggaaaagtagctagtggtacaattagactgcaatcgaatgatgatacaacggctcaagaaggattatctccgacaggtgaggactccgactctgaatacctctcaatcgaggagaagtaccatcatgaacttaaacgagcccgtcatctggttttcggcaaccccaaagcgcatcgtaaccatttgggtgatgatctttga

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