LOCUS       XM_018880214            1368 bp    mRNA    linear   PLN 07-JAN-2024
DEFINITION  Sugiyamaella lignohabitans Wbp1p (WBP1), partial mRNA.
ACCESSION   XM_018880214
VERSION     XM_018880214.1
DBLINK      BioProject: PRJNA342695
            BioSample: SAMN04417247
KEYWORDS    RefSeq.
SOURCE      Sugiyamaella lignohabitans
  ORGANISM  Sugiyamaella lignohabitans
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Dipodascomycetes; Dipodascales; Trichomonascaceae; Sugiyamaella.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Bellasio,M., Peymann,A., Valli,M., Sipitzky,M., Graf,A., Sauer,M.,
            Marx,H. and Mattanovich,D.
  TITLE     Complete genome sequence and transcriptome regulation of the
            pentose utilising yeast Sugiyamaella lignohabitans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1368)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1368)
  AUTHORS   Peymann,A. and Graf,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2016) Department of Biotechnology, University of
            Natural Resources and Life Sciences, Muthgasse 18, Vienna, Vienna
            1190, Austria
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_031674).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Sugiyamaella lignohabitans"
                     /mol_type="mRNA"
                     /strain="CBS 10342"
                     /type_material="culture from holotype of Candida
                     lignohabitans"
                     /db_xref="taxon:796027"
                     /chromosome="B"
     gene            <1..>1368
                     /gene="WBP1"
                     /locus_tag="AWJ20_3206"
                     /db_xref="GeneID:30035203"
     CDS             1..1368
                     /gene="WBP1"
                     /locus_tag="AWJ20_3206"
                     /inference="similar to AA sequence:KEGG_Orthology:K12670"
                     /note="Beta subunit of the oligosaccharyl transferase
                     glycoprotein complex; required for N-linked glycosylation
                     of proteins in the endoplasmic reticulum; GO_component:
                     GO:0005783 - endoplasmic reticulum [Evidence IEA];
                     GO_component: GO:0005783 - endoplasmic reticulum [Evidence
                     IDA] [PMID 12860997]; GO_component: GO:0005783 -
                     endoplasmic reticulum [Evidence IDA] [PMID 1724755];
                     GO_component: GO:0005789 - endoplasmic reticulum membrane
                     [Evidence IEA,IEA]; GO_component: GO:0005789 - endoplasmic
                     reticulum membrane [Evidence IMP] [PMID 12974639];
                     GO_component: GO:0016021 - integral component of membrane
                     [Evidence IEA]; GO_component: GO:0016020 - membrane
                     [Evidence IEA]; GO_component: GO:0005635 - nuclear
                     envelope [Evidence IDA] [PMID 1724755]; GO_component:
                     GO:0008250 - oligosaccharyltransferase complex [Evidence
                     IPI] [PMID 10358084]; GO_component: GO:0008250 -
                     oligosaccharyltransferase complex [Evidence IPI] [PMID
                     16297388]; GO_component: GO:0008250 -
                     oligosaccharyltransferase complex [Evidence IPI] [PMID
                     9405463]; GO_function: GO:0004579 -
                     dolichyl-diphosphooligosaccharide-protein glycotransferase
                     activity [Evidence IEA]; GO_function: GO:0003674 -
                     molecular_function [Evidence ND]; GO_function: GO:0016740
                     - transferase activity [Evidence IEA]; GO_function:
                     GO:0016757 - transferase activity, transferring glycosyl
                     groups [Evidence IEA]; GO_process: GO:0000278 - mitotic
                     cell cycle [Evidence IDA] [PMID 1724755]; GO_process:
                     GO:0006487 - protein N-linked glycosylation [Evidence IPI]
                     [PMID 9405463]; GO_process: GO:0018279 - protein N-linked
                     glycosylation via asparagine [Evidence IEA]; GO_process:
                     GO:0006486 - protein glycosylation [Evidence IEA]"
                     /codon_start=1
                     /product="Wbp1p"
                     /protein_id="XP_018738055.1"
                     /db_xref="GeneID:30035203"
                     /translation="

MYFCQWLLTAGIAALSLGAGFAKPLNGAGRTLVVVDDPNEYSQYLESLEQREFQLTIKDTHDESGLELVNYGELTYDNLIVLPTKAKSLGPKLSAKALLEYFNLGGNILAVTSAKSSPESLREFAAELDIHISPRGYQIVDHFNSADSSDEHNVLKLTSANINAPDSVISDIISHDEDGGSTKSGEFDYEAGNAAYLGNNELVIPFISAPSTSYVFDAREQEDNDVADKLWVSGSQAYLAAGLQSRKNTRFSWVGSASLFKNGAAASASAIDNITKWTFQEKSVLKSVGASHYDLTFPEVENPHIYKVSTDVLYLISLSEWNGNEWVPFDASDVQLEFIMLDPYYRLTLSRNATAEAAAEDGSIAIYSTQFKAPDQYGMFTFKTEYQRPGYTFVEDARVVTVRHIANDEWPRSWEITNSWVYLTSAGSVVIGWLVFVAFYLYTGYSPKKSDKKTQ"

     misc_feature    88..1332
                     /gene="WBP1"
                     /locus_tag="AWJ20_3206"
                     /note="Oligosaccharyltransferase 48 kDa subunit beta;
                     Region: DDOST_48kD; pfam03345"
                     /db_xref="CDD:460890"
ORIGIN      

atgtatttttgtcaatggctactaacagccggaattgccgcattgagtttgggtgccggatttgctaagccattgaacggtgctggcagaactttagtagttgtagatgaccccaatgaatattcacagtatctggagagtctagaacaacgtgaattccaactcacgatcaaagatacgcatgacgagtctggtctagaattggtcaattatggtgaattgacatatgataatctgattgttctgcctaccaaagccaagtctctaggtcctaaattgagtgctaaagctctgttggaatatttcaacctaggtggtaatattcttgcagtcacatctgctaagtctagtcctgaaagcttacgagagtttgctgctgagttggatatccacattagtcctagaggatatcaaattgttgaccacttcaactctgctgatagttcagacgagcacaatgtgttgaaattgacatcggccaatatcaatgcccccgacagtgttatttcagatatcatctcccatgacgaagatggtgggtccaccaagtctggagagtttgactatgaggctggcaatgctgcctacctaggaaacaacgagcttgtaattccatttatttctgctccttccactagttatgtttttgatgctcgtgagcaagaagataatgatgtggcagataagctgtgggtttcgggttctcaagcttatctggctgctggccttcaaagccgaaaaaacacccgattctcatgggtcggcagtgctagtttgttcaaaaacggagctgctgcttctgcatcggctattgacaatatcaccaaatggacctttcaagaaaaatctgttcttaaaagtgtaggtgcatctcactatgatttgacgtttcctgaagtggagaatcctcatatttacaaggtttcaaccgatgttctttatcttatctcactttctgaatggaacggtaatgagtgggttccatttgatgcttctgatgttcagcttgaatttatcatgctcgacccctactacagattaactctcagccgtaatgcaactgctgaagctgctgctgaagatgggtcaattgctatttactcgactcaattcaaggctcctgatcagtatggtatgttcactttcaagacggaatatcaacgcccaggatatacatttgttgaagatgctcgtgttgtaactgtgcgacacattgcgaacgacgaatggcccagaagttgggaaattacaaattcctgggtttatctgacatcggctggttctgtagtcattggatggttggtgtttgtggctttctatctatatacaggatacagtccaaagaagagcgacaagaagacccagtaa

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