LOCUS       XM_018081282            6636 bp    mRNA    linear   VRT 29-JUL-2019
DEFINITION  PREDICTED: Manacus vitellinus protein argonaute-1 (LOC103756552),
            mRNA.
ACCESSION   XM_018081282
VERSION     XM_018081282.1
DBLINK      BioProject: PRJNA341382
KEYWORDS    RefSeq.
SOURCE      Manacus vitellinus (golden-collared manakin)
  ORGANISM  Manacus vitellinus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Manacus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_021940628.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Manacus vitellinus Annotation
                                           Release 103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6636
                     /organism="Manacus vitellinus"
                     /mol_type="mRNA"
                     /isolate="BGI_N305"
                     /db_xref="taxon:328815"
                     /chromosome="Unknown"
                     /sex="female"
                     /country="Panama"
     gene            1..6636
                     /gene="LOC103756552"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 16 ESTs, 44 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:103756552"
     CDS             199..2547
                     /gene="LOC103756552"
                     /codon_start=1
                     /product="protein argonaute-1"
                     /protein_id="XP_017936771.1"
                     /db_xref="GeneID:103756552"
                     /translation="

MVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWMAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNERIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQALAKAVQVHQDTLRTMYFA"

     misc_feature    241..465
                     /gene="LOC103756552"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:435368"
     misc_feature    493..645
                     /gene="LOC103756552"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:430160"
     misc_feature    646..1008
                     /gene="LOC103756552"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(802..804,847..849,889..891,901..903,955..957,
                     976..978,982..984)
                     /gene="LOC103756552"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1141..2418
                     /gene="LOC103756552"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1552..1554,1564..1566,1600..1611,1618..1620,
                     1642..1644,1651..1653,1663..1665,1675..1677)
                     /gene="LOC103756552"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1756..1758,1762..1764,1972..1974,2386..2388)
                     /gene="LOC103756552"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

gcaggcgcatacctgccccccttgcagcaggtgttccaagcgccgcggcggcccgggataggaaccgtcgggaagcccatcaagctcttggccaactactttgaagtggacattcccaagatcgatgtgtatcattatgaagtggatatcaagcccgacaaatgtccacgcagagtcaacagggaagttgtggagtacatggtgcagcacttcaaaccacaaatctttggcgaccgaaaaccagtctatgatgggaagaagaacatctacactgtcacagccttgcccattgggaacgagcgggttgactttgaggtgacgatcccgggggaaggcaaggacaggatatttaaggtctccatcaaatggatggccatcgtgagctggcgcatgctgcacgaggccctggtcagcgggcagatccccgtccccctggagtccgtccaggcgctggatgttgccatgaggcacctggcttccatgaggtacactcctgtcggccgctccttcttctccccccccgaaggctactaccaccccctgggagggggcagggaggtctggttcggcttccaccagtcagtccggcctgccatgtggaagatgatgctcaacatcgatgtgtcggccaccgccttctacaaggcccagcctgtcatcgagttcatgtgcgaggtgctggacatccgtaacatcgacgagcagcccaagcccctgacggactcgcagagagtgcgtttcaccaaggagatcaaaggtctgaaggtggaggtgacccactgtgggcagatgaagaggaaataccgcgtgtgtaacgttacccggcggccggccagccaccagacgttccctctgcagctggagagcggtcagactgtggagtgcacagtggctcagtactttaagcagaaatacaacctgcagctgaaatacccccacctgccctgtctccaggttggccaggagcagaaacacacgtacctgcccttggaggtgtgtaacatcgtggctggccagcggtgcatcaagaagctcacggacaatcaaacgtcaaccatgataaaagcaacagccaggtctgccccagacaggcaggaggaaatcagtcgcctgatgaagaacgccagctacaacctggacccatacattcaggagtttgggatcaaggtgaaggatgacatgacggaggtgacggggcgggtcctgccggcacccatcctgcagtacggaggccggaaccgggccattgcaactcccaaccagggcgtgtgggacatgcgagggaagcagttctacaacggcattgagatcaaagtctgggccattgcctgctttgccccgcagaagcagtgtcgagaggaggtgctgaagaacttcacagaccagctgcgcaagatctccaaggacgccgggatgcccatccagggccagccctgcttctgcaagtacgcccagggtgcagacagtgtggagcccatgttccgacacctcaagaacacctattcgggcctgcagctcatcattgtcatcctgccagggaagacgccggtgtacgctgaggtgaagcgtgttggggacactctcctgggaatggccacgcagtgtgtccaggtcaagaacgtggtgaaaacctccccgcagaccctttccaacctctgcctcaagatcaacgtcaagcttggcgggatcaacaacatccttgtgcctcaccagcgctctgctgtctttcagcagccggtgatcttccttggggccgatgtcactcacccaccggcaggagatgggaagaaaccctccataacggctgtcgtgggcagcatggacgcccaccccagccggtactgtgccacggtgcgcgtgcagcgcccgcgccaggaaatcatcgaggacctgtcctacatggtgagggagctcctcatccagttctacaaatccacccgcttcaaacccaccaggatcatcttctaccgcgatggtgttcccgaggggcagctcccacagatccttcactatgagctcctggcgatccgagacgcctgcatcaaactggaaaaagattaccagcctggcatcacctacatcgtcgtccagaagaggcatcacacccgtctcttctgtgcagacaagaacgagaggattgggaagagcgggaacatcccagcaggaacaacagtggatacaaacatcacccacccctttgagttcgacttctacctgtgcagtcatgcaggcattcagggcacgagccggccatcccactactacgtgctgtgggatgacaaccggttcacagcagatgagctgcagatcctcacgtaccagctgtgccacacctacgtgcgctgcacccgctccgtgtccatcccagccccagcctactacgccaggctggtggcattccgggccaggtaccacctcgtggacaaggagcacgacagcggcgagggcagccatatatctggacagagcaacggcagagacccccaggccttggcgaaggctgtgcaggttcatcaggacactttacgtaccatgtactttgcttgaaagcctaacttttgttacctcactcaagaaagctttcagatttgtaggagccatacaaaaaaggaagcattgggacaccttgttttttttttccaatgagaaatcactgcagggcaggcagcgtcgactcgaggcaggagaccagcaccacgggacagaacgatccaacacctgtgtcggattggaagaaagagactgatgatgatgatgatgatgatgatgatgatgattatttttttagttttttctggctttgcaaaattttgacctgaccaaacacatgaaggcattcaagggaagggataaagctcccgggaggcggaagcaggttttcatttttaagatgcaatactagagactcctgactgtgaactggcggctttggtcctccgttgcccaccaggcgctggtaggtattttttgtgggggttggggggaggggatttttagagccttaaaacagaagactagatttataaaactaatattttagattatgagatgctttaatgggttaagggggaaaaaaaaaaaaccaactagtttataggagaattctaacactaacagttccccgcccccgagtaattccccccggataatgtaaggcaccctagcacttagctcagaactgaaaactgtcttcctcgtgttacaagctagtcagctgctgccgctcgaagcaacagtcacagactattccatgggtgagtgccttactatgatgctgcaaaatttcaatgtttttaatcttgtaaggaaactagtaatcttgtcttgatggtggtccatatttccatcggaaggagttaatttctatggtcctcagttgcagtttgtgtcagatcacgacctcacggtggttaaaccccattgaaagatgtgcactttcatacaggacacgtttaatggctgctgacccatttttgtttccaatgtactacttgttatttaaaactgttctgacaaatgggggcatctccatcccatgaggagagaaagcactatccattttttcttttttttttttttttccttcccccccgaatttttatgatgggacaccgggatttttttactagacattatttttatatgatactgagtctgttgccaaaatccacaagtcattaacattctcagagtttacatccccgcacttcctgaggctgtgtgctcatgccagagctttccagcgtttcctgtccgatgagtgttgccgcctgcagcccgttccgtgccgggtgctccgcagtgcccgtggtccctgtgcatccagcatgtgtctgcccgggctggctgctttccaactaccacatcccccacctccagcacctcccggctcactctctctgctgctcagttttgctgctcctcgtgtcacagtatcactgctcccatgcccagggttttgattctgaaagcacaccagatcattccttagaatgatgaaatccttgttgttgtcacgggggaaactcctgatttgtgtgtgtagcaggaaaacagcctttttccccgcaggaacctggtcactgcttttcaggcccgttttgctgcgcagcgaccgcacgcacggcggcggggccgtgggggcagctcagtaccgctatcatccgggcagattatctggggtttttgagatgaaagtgctcccagcgcctccttcaagggacgaacgaggcgcacgctctgcggggaagagctctggtctcattttcctgcccgacgcgtgtcccagacagccccgtgcgagcgctgccccggcccgcgcgcggacaggggcacatccacacccctttggtttgtactttctgacgcggaaacttgccttgccttcacgggaaacacaccggtcatgttggcctattgagctgtcctaaccccgggaattcactcttcccgttttcttttggggcaacgtgtttgtgaacagtgaagacatcactatgctatgcaaactaagtgctgagcccactgatgtcacgtttggtgaagatcctacgtttagcacagtcctgtttttcctcaagaccacagtgtttggttcatattctcctttgcaccttgtgtcaacctccactgctgtatatcctcaaggtgacgaggaggagaccaggaactattcgtggtcagtaggtagggaactcttaggaaggcttttagagcgtagggaacgcatcaacactaagtgtcaacatgagaagcctacattcctctacacaagtgcctgcatagtgacaccaatcagcacctccatctcatcctccgaactctggcttatgttcattgaaagcaaaacgatctcagaggggctgttcccgctcacctggtggtagaaagcttctcattaagaataaaatcggggtcaaggtcaaggttctctctgcaaatcagtttgttcaccagcattacaccggaacgcgcctggctgctgctctgcagcgaggggcaaagggattttggttcctcgtttttattttagtgttttagttgggtctagaattctgaaatgtcttttagtagctgtggcatagcacgtgccatttttaaccatttgaaaagagatagtgtgggtatttacagaaacagcttgttgctctgtaacaattttttttaaccttgagacttgaaatgtaaaatggacctttaagatttgcactcatttgtaaggtggctgttcatagaaaactatgaatgaagacttgctgatgtagcacctacttttaacagcaattttaactacacaaaagcttcacagcttctgaaactctcagctgttgacttgcagatcgtgttctgcccttatttcaccctctgcgttgggttttcatggttttggataaataaaaaaagccaaactcagtagctgctgtgccctttaaacccagtttccactttgaagaactgtagagaggttggagtgacccgcatgttttctataccggactatgcaccgtgccctctccgcgctccggcaccggcatttcccccttctcctgtccgagatgcaaacgagtagctgcatgtggaggtgctgccgtaggcgataggtgttccccaggtacatgccaggactgtagttagccacaacccccacacggacatcccgatgggctccgagcctctgccttctccgtgcgcacgagctcgtctgccactggaagcgtcgccgggtgcatgcagttctgtgggaagaggagtggctttcatttgcctgttgaatgctgttgttccccttatctcatatctggacagaacggggcgggaggtctgctctgccctctccccgcagctccagggcggtcggggtgttctgggatcgcacgtgtccgacccgatgtctcagtgtcacccagcgttgcctcgcggaaggttttcttcttggaaaatcagtgtgaaataaaaagaatgtgattgtttcaggaagggaagccagacagcaggagagcaataaacaagtgaaattcatatcttgcctgagtgatttgcacttcaatagttgtgaaagaaaatttccaggactccagtgcttttgtgtttgatttccagcccctttcgtacctcctttctacgagcaagtgtgggactgtacatagggtgtttacaggatgctccctttgggttgttacttttcttgtgggttttttttgctctagcttgaactctgtatggtccatttgttaaatagccgtgaacagctgatgtacagtacttactaaacaagcagcagcacaaaacttattttattaagaaaatatggcttatattttaaaggttgaatatcaggttttttttgtatgtgtggaattaagactggtaaagagtaacaaaatccttggattaggccaaaagaaaatactgtaagatcataaccacctctttattaaagaaagcagtatgattaaagagctccagaacattgtatttatattggatttgatttaattgcctttgtggattttattttttttttgccttggtcctgatttttgcttgcaacttcgactttgcagtcccaagtgtctgttacctgtaactgttggcggaagacctaaataaaagcaatgtgaatatgtcggggtgaca

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