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Previous release (v1)
2025-12-08 04:08:14, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_016748234 1200 bp mRNA linear PLN 28-AUG-2017
DEFINITION Penicillium expansum Thiolase-like, subgroup (PEX2_109680), partial
mRNA.
ACCESSION XM_016748234
VERSION XM_016748234.1
DBLINK BioProject: PRJNA319326
BioSample: SAMN02928573
KEYWORDS RefSeq.
SOURCE Penicillium expansum
ORGANISM Penicillium expansum
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae;
Penicillium.
REFERENCE 1 (bases 1 to 1200)
AUTHORS Ballester,A.R., Marcet-Houben,M., Levin,E., Sela,N.,
Selma-Lazaro,C., Carmona,L., Wisniewski,M., Droby,S.,
Gonzalez-Candelas,L. and Gabaldon,T.
TITLE Genome, Transcriptome, and Functional Analyses of Penicillium
expansum Provide New Insights Into Secondary Metabolism and
Pathogenicity
JOURNAL Mol. Plant Microbe Interact. 28 (3), 232-248 (2015)
PUBMED 25338147
REFERENCE 2 (bases 1 to 1200)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (28-AUG-2017) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1200)
AUTHORS Ballester,A.-R., Marcet-Houben,M., Levin,E., Sela,N.,
Selma-Lazaro,C., Carmona,L., Wisniewski,M., Droby,S.,
Gonzalez-Candelas,L. and Gabaldon,T.
TITLE Direct Submission
JOURNAL Submitted (19-AUG-2014) Bioinformatics and Genomics Department,
Center for Genomic Regulation (Barcelona), Dr Aiguader 88,
Barcelona, Barcelona 08003, Spain
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NW_015971421).
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..1200
/organism="Penicillium expansum"
/mol_type="mRNA"
/strain="MD-8"
/isolation_source="fruit"
/host="apple"
/db_xref="taxon:27334"
/chromosome="Unknown"
/geo_loc_name="USA"
/collection_date="1992"
gene <1..>1200
/locus_tag="PEX2_109680"
/db_xref="GeneID:27683655"
CDS 1..1200
/locus_tag="PEX2_109680"
/codon_start=1
/product="Thiolase-like, subgroup"
/protein_id="XP_016595076.1"
/db_xref="GeneID:27683655"
/translation="
MIKPVYIVGAARTPTARINTQLGSVPSTKLGSITIREALHRSKVPLDLFSGVYMGQVLQAGAGQAPAKQAAMQAGLAPDIEATTINKVCASGLKAITLAAQDIQLGYAVAQVAGGMESMSNVPMYSKKGDDCSHKEKPVIDGLLLDGLINASDGRSMGACADGVARQMGISREDQDQYALATYTRACRAQQSNTFQEEIVPVLVDGATAEIFDTDSLPHESLFSRLRSLKPVFSPGGTVTAGNACSLSDGGSAVVLVNGQVAKQFCQENRVLAKIVAYADASVAPHEFALAPTKAIQLVLESAQMCAEQISLWEINEAFAIVVIASQLLLGLDPDRINVNGGAIALGHPLGSSGCRILVTLLHQLSHDQYGIAVICNGGGGATAMLIQRVQGKSLDALA"
misc_feature 16..1167
/locus_tag="PEX2_109680"
/note="Thiolase are ubiquitous enzymes that catalyze the
reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and...; Region: thiolase;
cd00751"
/db_xref="CDD:238383"
misc_feature order(70..72,151..153,193..195,202..204,214..216,247..258,
280..282,301..306,313..315,358..360,832..834,838..840,
844..846,904..906,1135..1140)
/locus_tag="PEX2_109680"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:238383"
misc_feature order(265..267,1042..1044,1126..1128)
/locus_tag="PEX2_109680"
/note="active site"
/db_xref="CDD:238383"
ORIGIN
atgataaaaccagtatacattgttggggcggcgaggacccccaccgcacgcatcaatacccagctaggctctgttccaagcaccaaacttggatctatcacaattcgtgaagcccttcatcgctcaaaagttccgcttgatctattctcgggtgtttacatgggccaagtgcttcaggctggcgccggtcaggcccctgcaaaacaagctgcgatgcaggccggattagcgccagacattgaggctaccacaataaacaaagtgtgtgcttctgggctcaaggccattacacttgccgcccaggatatccaactggggtacgccgtcgctcaggtggctgggggaatggagagcatgtcgaatgtcccaatgtactcaaagaaaggtgatgactgcagccacaaggagaagccggtgattgatggtctcctgcttgatgggttgattaatgcctcagatggccggtctatgggggcctgtgctgatggtgtggctcggcagatgggtatctcccgcgaggaccaagatcaatatgcccttgctacctatacccgggcgtgtcgagcacagcagagcaatacattccaagaagagattgtgcccgtgttagtagatggagctacggcggaaatatttgacacagacagtctcccccacgagagcctttttagccgactccggtcattgaaaccagttttctcccctggtggcacagtcaccgctggaaatgcctgctcgctaagtgacggtggctcagcagtggtgctggtgaatggccaagttgctaagcagttctgtcaggagaatcgagtgttggcgaaaatagtggcttatgccgatgcatccgttgccccacacgagttcgctctggctccaaccaaagcaattcagcttgtccttgagagtgcccaaatgtgtgctgaacagatctcattatgggaaattaacgaagcttttgctatcgtggtgatagcttcacaactgctgctcggcttggatcctgatagaattaatgtcaacgggggagcgatcgcacttgggcaccccttgggcagctcaggctgtcgaattctggtcactctcttgcaccagctgtctcatgatcaatatggcattgccgttatttgcaatggaggtgggggtgccacggctatgcttatccagcgagtccaaggtaaaagtttggatgccctagcatga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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