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Previous release (v1)
2025-12-08 04:08:27, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_015225137 1064 bp mRNA linear PLN 28-JAN-2019
DEFINITION PREDICTED: Solanum pennellii FCS-Like Zinc finger 14-like
(LOC107024211), mRNA.
ACCESSION XM_015225137
VERSION XM_015225137.2
DBLINK BioProject: PRJNA256426
KEYWORDS RefSeq.
SOURCE Solanum pennellii
ORGANISM Solanum pennellii
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; asterids; lamiids; Solanales; Solanaceae;
Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_028643.1) annotated using gene prediction method: Gnomon,
supported by EST evidence.
Also see:
Documentation of NCBI's Annotation Process
On Jan 28, 2019 this sequence version replaced XM_015225137.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Solanum pennellii Annotation Release
101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1064
/organism="Solanum pennellii"
/mol_type="mRNA"
/db_xref="taxon:28526"
/chromosome="7"
/note="Tomato Genetics Resource Center (TGRC):accession
LA0716"
gene 1..1064
/gene="LOC107024211"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 70 ESTs, 2 Proteins, and 100%
coverage of the annotated genomic feature by RNAseq
alignments"
/db_xref="GeneID:107024211"
CDS 305..928
/gene="LOC107024211"
/codon_start=1
/product="FCS-Like Zinc finger 14-like"
/protein_id="XP_015080623.1"
/db_xref="GeneID:107024211"
/translation="
MAERKGNKKRLCINLSLFTLTDNNNSNSNKSPKKFEDPNGAVVGLGIVAAMNKESKNRAAIIAISPRSTTSNPIPIFTSFKKKPSIEEMEMCEEYTCVISHVGTNLVKKREYFDGQFIGNSNFNAYQKTVNHTTSFTMADFLNSCFLCKKQLKGLDIFMYRLEFQLCFLGYCNDYMLTFWDLIFSCRLCFISKYVAALILNRYMLLF"
misc_feature 719..>787
/gene="LOC107024211"
/note="zinc-finger of the FCS-type, C2-C2; Region: zf-FLZ;
pfam04570"
/db_xref="CDD:428015"
ORIGIN
ctcctcctccattgaaaaaccagagttgtgctcctcttctcagtgagggagaaccaggaaaaaaagtgtagagagagaaacttctgccttttcccctctctctctatttctctttcctttctctctctatatgtatagataactctgtatttagtgaaggattaaaactagacattgagtatagcaaggagatttagcaaaaacaaaaaatccataaagattcagttttttttcctgtttttgagagatttaagagaaccccattaaaatttaatctatttgtctatctgggtgtgggtttaaaatggctgaaaggaaaggaaacaagaagagattgtgtataaatctttccctttttaccctaactgataacaacaacagcaacagcaataaatctcctaaaaagtttgaggacccaaatggtgctgttgttgggcttggaattgtggcagctatgaataaggagagcaaaaatagagctgcaattattgctatatctccaagatcaactacttcaaacccaatcccaatttttactagttttaagaagaagcctagtattgaagaaatggagatgtgtgaggagtatacttgtgttatttctcatgttggtacaaatttggttaagaaaagagagtattttgatggtcaatttataggaaatagcaattttaatgcctaccagaaaactgttaatcatacaacaagttttactatggctgatttcctcaattcttgctttctttgcaagaaacagcttaaggggttggatattttcatgtacaggttagaatttcaactttgttttttaggttattgtaatgattatatgttaactttttgggatctgatatttagctgcagattatgtttcatatctaagtatgttgcagctttaatcttgaatagatatatgcttttgttttgagtaaaatggttgaatgaacttagtcatgctacatattgaatggatttttaggagtaaaatgtttcttcaattgtggaccctgcagaacctttatatatttgataaatgatatgatatcttatcttgtttacttttt
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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