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2025-12-08 04:08:15, GGRNA.v2 : RefSeq release 232 (Sep, 2025)

LOCUS       XM_014429273            1096 bp    mRNA    linear   INV 01-AUG-2024
DEFINITION  PREDICTED: Halyomorpha halys fission 1 protein (Fis1), mRNA.
ACCESSION   XM_014429273
VERSION     XM_014429273.3
DBLINK      BioProject: PRJNA298780
KEYWORDS    RefSeq.
SOURCE      Halyomorpha halys (brown marmorated stink bug)
  ORGANISM  Halyomorpha halys
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Paraneoptera; Hemiptera; Heteroptera;
            Panheteroptera; Pentatomomorpha; Pentatomoidea; Pentatomidae;
            Pentatominae; Halyomorpha.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_027111767) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 1, 2024 this sequence version replaced XM_014429273.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_000696795.3-RS_2024_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/26/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Halyomorpha halys"
                     /mol_type="mRNA"
                     /isolate="HHAL.00"
                     /db_xref="taxon:286706"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="whole organism"
                     /note="undomesticated insect"
     gene            1..1096
                     /gene="Fis1"
                     /note="fission 1 protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 8 Proteins"
                     /db_xref="GeneID:106686126"
     CDS             224..673
                     /gene="Fis1"
                     /codon_start=1
                     /product="mitochondrial fission 1 protein"
                     /protein_id="XP_014284759.1"
                     /db_xref="GeneID:106686126"
                     /translation="
MDEILDEVGSPEELKKFEAIYNQQLEEQSVTTDATFNYAWSLVRSRYAADIRKGICLLETIFNEDREQTRRDCVYYLAIGYAKLKEYNKALQYTKAFLNLEPANLQVQSLDSTIRKRMEKEGLIGMALAGGAVLALGGLVTLGLALSKK"
     misc_feature    251..592
                     /gene="Fis1"
                     /note="Mitochondrial Fission Protein Fis1, cytosolic
                     domain; Region: Fis1; cd12212"
                     /db_xref="CDD:276936"
     misc_feature    order(260..262,269..274,281..283,317..325,329..334,
                     341..343,368..370,377..382,386..391,398..400,407..412,
                     416..418,425..427,431..439,443..445,449..451,473..475,
                     479..481,488..490,497..502,509..511)
                     /gene="Fis1"
                     /note="heterodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:276936"
     misc_feature    317..415
                     /gene="Fis1"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276936"
     misc_feature    425..523
                     /gene="Fis1"
                     /note="TPR repeat [structural motif]; Region: TPR repeat"
                     /db_xref="CDD:276936"
     polyA_site      1096
                     /gene="Fis1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
tttaatgaaatagattaatatcattaagccataaagaataacataaccgtctgatagttgactttgagccaaagcccataaattcaacctagcagcacgaacagctgtttttgttgggactcggggaggcagcgctatctcaagtgattagttcaaccttctgtcatagttgattagtgttcgtcagtcctttaattgtcatgctgtaagaatacaattcggaatggacgaaatcttagatgaagtgggttccccagaagaacttaagaaatttgaagcgatatacaaccaacaattagaagaacaatcggttactaccgatgcaacttttaattatgcttggagcttagttcgtagtcgttatgcagctgacataagaaaaggcatatgtctattagaaactattttcaatgaagatagagagcaaacaagaagagattgtgtttattacttagccataggctatgccaaattaaaggagtataataaagcactgcaatataccaaagcttttttaaatttagaaccagcaaacctccaggtgcaaagtttagatagtaccattaggaaaagaatggagaaagagggtctgattggtatggcactggctggaggagctgttttagcgcttggaggtcttgttacattgggattagctttatcgaaaaaataacttttaattcttaccatgttgtttttgttttgtttaaaaacagcatggtaatttaaataaataaatacaccttcgcattttttattttattatttttattttacatggttgtgttagatgtgatatttaaggaagtcattttagttcataaattattttaataatttagaatatataaattattgttctttaattataactatttaaaaaaataatataaaaaattttcaacctttttttttgttatgctttatttatgtttagcacaaaatattatatctcattccaatttcttggggcatctgttgatacattagaaaagtaagtcaggatgtattatattaaaaaaaataaagttgaaaaataataatacacacatttgaatttttatagtatttcttttcaaataaattttaacttttc
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]