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Previous release (v1)
2025-12-08 04:08:15, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_014429273 1096 bp mRNA linear INV 01-AUG-2024
DEFINITION PREDICTED: Halyomorpha halys fission 1 protein (Fis1), mRNA.
ACCESSION XM_014429273
VERSION XM_014429273.3
DBLINK BioProject: PRJNA298780
KEYWORDS RefSeq.
SOURCE Halyomorpha halys (brown marmorated stink bug)
ORGANISM Halyomorpha halys
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Paraneoptera; Hemiptera; Heteroptera;
Panheteroptera; Pentatomomorpha; Pentatomoidea; Pentatomidae;
Pentatominae; Halyomorpha.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_027111767) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On Aug 1, 2024 this sequence version replaced XM_014429273.2.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_000696795.3-RS_2024_07
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.3
Annotation Method :: Best-placed RefSeq; Gnomon;
cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 07/26/2024
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1096
/organism="Halyomorpha halys"
/mol_type="mRNA"
/isolate="HHAL.00"
/db_xref="taxon:286706"
/chromosome="Unknown"
/sex="female"
/tissue_type="whole organism"
/note="undomesticated insect"
gene 1..1096
/gene="Fis1"
/note="fission 1 protein; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 1 long
SRA read, 8 Proteins"
/db_xref="GeneID:106686126"
CDS 224..673
/gene="Fis1"
/codon_start=1
/product="mitochondrial fission 1 protein"
/protein_id="XP_014284759.1"
/db_xref="GeneID:106686126"
/translation="
MDEILDEVGSPEELKKFEAIYNQQLEEQSVTTDATFNYAWSLVRSRYAADIRKGICLLETIFNEDREQTRRDCVYYLAIGYAKLKEYNKALQYTKAFLNLEPANLQVQSLDSTIRKRMEKEGLIGMALAGGAVLALGGLVTLGLALSKK"
misc_feature 251..592
/gene="Fis1"
/note="Mitochondrial Fission Protein Fis1, cytosolic
domain; Region: Fis1; cd12212"
/db_xref="CDD:276936"
misc_feature order(260..262,269..274,281..283,317..325,329..334,
341..343,368..370,377..382,386..391,398..400,407..412,
416..418,425..427,431..439,443..445,449..451,473..475,
479..481,488..490,497..502,509..511)
/gene="Fis1"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:276936"
misc_feature 317..415
/gene="Fis1"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276936"
misc_feature 425..523
/gene="Fis1"
/note="TPR repeat [structural motif]; Region: TPR repeat"
/db_xref="CDD:276936"
polyA_site 1096
/gene="Fis1"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
tttaatgaaatagattaatatcattaagccataaagaataacataaccgtctgatagttgactttgagccaaagcccataaattcaacctagcagcacgaacagctgtttttgttgggactcggggaggcagcgctatctcaagtgattagttcaaccttctgtcatagttgattagtgttcgtcagtcctttaattgtcatgctgtaagaatacaattcggaatggacgaaatcttagatgaagtgggttccccagaagaacttaagaaatttgaagcgatatacaaccaacaattagaagaacaatcggttactaccgatgcaacttttaattatgcttggagcttagttcgtagtcgttatgcagctgacataagaaaaggcatatgtctattagaaactattttcaatgaagatagagagcaaacaagaagagattgtgtttattacttagccataggctatgccaaattaaaggagtataataaagcactgcaatataccaaagcttttttaaatttagaaccagcaaacctccaggtgcaaagtttagatagtaccattaggaaaagaatggagaaagagggtctgattggtatggcactggctggaggagctgttttagcgcttggaggtcttgttacattgggattagctttatcgaaaaaataacttttaattcttaccatgttgtttttgttttgtttaaaaacagcatggtaatttaaataaataaatacaccttcgcattttttattttattatttttattttacatggttgtgttagatgtgatatttaaggaagtcattttagttcataaattattttaataatttagaatatataaattattgttctttaattataactatttaaaaaaataatataaaaaattttcaacctttttttttgttatgctttatttatgtttagcacaaaatattatatctcattccaatttcttggggcatctgttgatacattagaaaagtaagtcaggatgtattatattaaaaaaaataaagttgaaaaataataatacacacatttgaatttttatagtatttcttttcaaataaattttaacttttc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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