LOCUS       XM_013513518            4575 bp    mRNA    linear   ROD 19-AUG-2015
DEFINITION  PREDICTED: Chinchilla lanigera testis and ovary specific PAZ domain
            containing 1 (Topaz1), transcript variant X3, mRNA.
ACCESSION   XM_013513518
VERSION     XM_013513518.1
DBLINK      BioProject: PRJNA210822
KEYWORDS    RefSeq.
SOURCE      Chinchilla lanigera (long-tailed chinchilla)
  ORGANISM  Chinchilla lanigera
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
            Hystricomorpha; Chinchillidae; Chinchilla.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_004955420.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Chinchilla lanigera Annotation
                                           Release 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4575
                     /organism="Chinchilla lanigera"
                     /mol_type="mRNA"
                     /isolate="Chin_1"
                     /db_xref="taxon:34839"
                     /chromosome="Unknown"
                     /sex="female"
     gene            1..4575
                     /gene="Topaz1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:102011775"
     CDS             65..4348
                     /gene="Topaz1"
                     /codon_start=1
                     /product="testis- and ovary-specific PAZ domain-containing
                     protein 1 isoform X3"
                     /protein_id="XP_013368972.1"
                     /db_xref="GeneID:102011775"
                     /translation="

MRRPRLPADPATALGREGDARGPRKRGRRPAPRPGEEGGHGPEAKGLEEGWRKRRVAARASAGPEVEAKEKRKITEASSDDQQPGIDLVYDNSFAQKPDSGCIHVAENSLKVKKENLRRPAEKSDTNSIRKLLETEGSLMGINKLLLEKNDLYKSKRNGLLSCLLSENNKYSVEESNVRRKPRKKMKLSEKKETVTETNFSNTWNESELVLKKKQVIMEGKEAEIPEAKKSPLEVLRKENYNTSSPVDHLSSLPETEEKKPSAGHHVNAMFPKTLEPPLKEETSNASEFLECKSMEPEEYFKTVTNSVTVESPSDSHHLENRSSQEDLRKKPEESKLSCRRTIPIIGKRIWPLYSCARVSPYYWKKPTLLNSNYSLPGSQGNFRQDNCHKHQTNQTVFSDSNLLQSSLTEKDIAHSNKEKLDSNLDHLSSSSAVEPTLVAIKEPIIDDKKTKSEELSRNRSEVVSNSIEDTQVTNVTQSLPGSKKKERGNVTKLNLTVAPQDGQEANSSTSKTIHRKTCIAKQALVVPDLVKILNTGRLTNFKIPLLKNKTEKNVNAKSSDREAYSPLELLDSLSGAEVRQNKNKDYTSASTSRPQSFSIQNRIAAGQAHSNSLYSKNPCSISPSFIKQGDDNKPFNHISEPSSVISNKEPVSLTIGNNALSYNPGCIEERPFCSKEQTFEPIFSEGSGTKMTKSISEIKVEFPDILKAYEDDVLLIDVIQDDPDLFGVSSEGEISFVSEVPKRSHVPNVTAEHQSADSQHMELPEKEPSDLREYPVLDPGLMKSEVCTSLPAAKEIKHDSKGTNISLELTNETSANEELGNVSEQVTGSDGDEKYRISDKMTVKEDKENIYEVCKSKDSRNGEIMVGECQLATLSPKPLRLSAPPVNLSGRQENAVPKPWMNDVRFPGKPSVLKLQNPEACEIFKREKNIEMFQKPLGLMIPHRYCKFHFNTIRGCERSLCKFAHVPEPGDEKVCMEVFKKYISINELCLLQRAVNIFMEYYRKFPPGMHFDLQVLNELLLSLLRYCLLKEVFQVVNLSIMIKMLPALKILLQIFEHVATMKLRNAVPALIDIFCKLVEAGMVLDPEHFNYIVKLLCQLQASKQDIAAILEIKSRLQMGQFTKSWKHDLDSALNEVENCKEKGDWTKLGNLYINVKMDCEQFADFQRFCACVAETLTKDYKEERPGVPFCDFAETVVKDPQNSDVDKTLLGRIGISAMYFYHKLLQWSKGKKVLDKLYELKIHFTSLKGLTGPAKLAPRCQIVNIAAEIFLKSGSLDGAIWVLRESEWVISTALWPCDRLDVLNRHNLLCTVAHEALAKSLYRQAFEVLQNLPGFQNSQETVEVSQPSLLFNKLLDACIESNSLGVSSSVAEFMVSKNIPIDFSFLRRLITSLGRSCLWLKARTHYKNVKKTNLGARMIIRLQSKG"

     misc_feature    <155..1495
                     /gene="Topaz1"
                     /note="MAEBL; Provisional; Region: PTZ00121"
                     /db_xref="CDD:173412"
     misc_feature    3473..4000
                     /gene="Topaz1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:464250"
ORIGIN      

cttgggcgtctgtgggcggcagtgtccttcgcggctcggcggcggctggttcgtgtggactgacatgcggcggccgcggcttcctgcggaccccgcgacggccctggggcgggaaggcgacgcgcgaggcccgaggaagcgtggccgccggcctgcgcccaggcccggcgaggagggaggccatggccctgaggccaaggggcttgaggagggctggcggaagaggagagtggcggcgcgggcgtctgcggggcccgaggtggaagccaaagaaaaaagaaaaattactgaagcctcaagtgatgatcaacagccaggaattgacctggtttatgataatagctttgcacagaaaccggacagtggatgtatacatgtagcagaaaattccttgaaggtaaagaaagaaaacctcaggagacctgcagagaagagtgacacaaacagtattcgtaagctcctagaaactgaaggaagtttaatgggaataaataaattactacttgaaaaaaatgacctatacaaaagtaaaaggaatggcttactttcttgccttctaagtgaaaataataaatattcagtagaggaaagcaatgtcaggagaaaacccagaaaaaagatgaagttgtctgaaaaaaaagaaacagttactgagacaaatttctctaacacatggaatgaatctgagttggtgttgaaaaaaaaacaagtaattatggaggggaaagaagcagagattccagaggctaagaaaagtcctttagaagttttgagaaaagaaaactataatacatcctctccagtggatcatttatcaagtctcccagaaacagaagaaaaaaaaccaagtgctggacatcatgtaaatgctatgtttccaaaaacccttgagccgcctttgaaagaagaaacaagcaatgcttcagagttcttggaatgtaaaagtatggagccagaagagtattttaaaacagtgacaaactctgttacagtggaatcacctagtgatagccatcatcttgaaaacagatcgtcacaggaagatttgagaaaaaaacctgaagaatcaaagctaagctgtcgcagaacaataccaataattggtaaaagaatctggcctttatattcatgtgctagagtatctccctattattggaaaaagcctactttgctaaactcaaattactcacttcctggatctcagggaaattttagacaagataattgtcataaacatcaaacaaaccagactgtcttttctgactccaacttgttacagagttctttaacagaaaaagacattgcacactcaaataaagaaaaactggattctaatttagatcatttgtcttcatcttctgcagtagaacctacattggtggctataaaggaacctataattgatgataaaaagacaaagtcagaggaacttagcagaaacaggtcagaggtagtttctaatagtattgaagatacccaggtaactaatgtgactcagagtttaccaggaagtaaaaaaaaagagagagggaatgtaacaaaacttaatttgacagtggctccccaggatggccaagaagcaaatagctctacaagcaaaactattcatcgaaaaacctgcattgctaagcaagcacttgtagttccagacttggttaaaatattgaacacaggacgtctgactaattttaaaattcctttacttaaaaataagacagaaaaaaatgtaaatgccaagtcatcagacagagaagcttacagtcctctagaacttcttgacagtttgtcaggagcagaggtaaggcagaataagaacaaagactatacctctgcctcaacttcaagacctcagtcttttagcatacaaaataggatagctgcaggacaagctcattctaactcactctacagtaaaaatccctgtagtatttctccaagctttataaagcaaggtgatgataataaaccatttaatcacatctctgaaccaagcagtgttatttctaataaagagcctgtttctctcacaattggaaataatgctttgtcttataatcctggatgtatagaggaaaggcctttctgctctaaagaacaaacatttgagccaattttctcagaaggaagtggtacaaaaatgactaagagcatttcagaaatcaaagtggagtttccagatattcttaaagcatatgaagatgatgtccttttaattgatgtaattcaagatgacccggacctctttggagtctccagtgaaggggagatctcatttgtttcagaggtccccaaaagaagtcatgtgcccaatgtcactgcagaacatcagtcagctgactcccagcacatggaacttccagaaaaagaaccaagtgatttaagagaatatcctgtattagaccccggattgatgaagtcagaggtctgcacttccttgccagcagcaaaagagataaaacatgattccaaaggtacaaacatttctttagaacttactaatgaaacctctgcaaatgaagaacttggaaacgtcagtgaacaagtgacaggttcagacggggatgaaaagtatagaatttctgacaagatgactgttaaagaagacaaagaaaatatttatgaagtttgcaaaagcaaagattctagaaatggagagatcatggttggtgaatgtcagttagcgacactgagccccaaacctctgcgcttgtcagcgccccctgtgaatctaagtggccgtcaagagaacgcagtaccaaagccctggatgaatgatgtcagatttcccggaaaaccttctgtcctcaagctgcagaatcctgaagcttgtgaaatattcaaaagggaaaaaaatatagagatgttccagaagccactggggctgatgatcccccacagatactgcaagtttcattttaacaccatccgaggctgtgagcgatcactgtgcaagtttgctcatgtgcctgagccgggggatgaaaaggtctgcatggaggtatttaagaaatacataagtatcaatgaactgtgcttgctacagcgcgcagtaaacatatttatggagtactacaggaagtttccccccgggatgcattttgacttacaagtgctcaacgagctcctgctttctttactcagatactgcctactgaaggaagtatttcaggtagtgaacctcagcataatgattaaaatgctgcctgctctaaaaatattactacaaatatttgagcatgtggcaactatgaaattaaggaatgctgtacctgctttaattgatatcttttgtaagcttgttgaagctgggatggtgcttgacccagaacattttaactatattgttaagcttttatgccaactgcaggcttccaaacaagacatagctgcaattttggaaatcaaatccaggttgcagatggggcagttcacaaagagctggaagcatgatttagattcagcattgaatgaagtagagaattgtaaagaaaaaggtgactggaccaaattgggaaatttatacattaatgtaaaaatggactgtgaacaatttgcggatttccaaagattttgtgcttgtgttgctgaaacactcacgaaagattataaagaagaaagaccaggtgttcctttctgtgattttgctgagacagttgtcaaagatccacagaatagtgacgtagataaaactttgctgggaagaattggaatcagtgctatgtacttttatcacaagctgttgcagtggtccaagggaaagaaggtcttggacaagctgtatgagttaaaaatacattttacaagtttaaaaggactcacagggcctgcgaagttagcaccaagatgtcaaattgtgaacattgcagcagaaatttttctcaaaagtggaagcctagatggtgccatttgggtactgagggaatcggagtgggtaatcagtactgcactctggccttgcgatagactggatgtgcttaaccgacacaacttgctgtgcacagttgcacatgaagccttagccaagagcctttacagacaggcatttgaagttttgcagaatctaccaggttttcaaaattctcaagaaactgtggaggtctcacagcctagcctgctttttaacaagctcttagatgcctgtatagaaagcaacagtcttggcgtgtcatcctcggtggcagaattcatggtttccaagaacatccctattgatttttcctttctgagaagattaattacttctttaggaaggagctgcctatggctcaaagcaagaacccactacaaaaatgtgaagaaaacaaatctcggagcaaggatgattatcaggctgcagtcaaaaggttaattttggctgctcgaatatcggacccaaaactttttattaagcacatgactgtcaatgttaataaggaacaggtttacagtttggaacactgctctgccctgaagtggctgaaagagaatatgaagtgggccggaaaggtttggctcttcagtaaccgtcgttagttaataaaggttttttttaaattcgagtaatcattgttgacaataaagactgttttcactcta

//