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Previous release (v1)
2025-12-08 04:08:15, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_013039291 1203 bp mRNA linear PLN 29-JUN-2015
DEFINITION Blastocystis hominis mRNA.
ACCESSION XM_013039291
VERSION XM_013039291.1
DBLINK BioProject: PRJNA263384
KEYWORDS RefSeq.
SOURCE Blastocystis hominis
ORGANISM Blastocystis hominis
Eukaryota; Sar; Stramenopiles; Bigyra; Opalozoa; Opalinata;
Blastocystidae; Blastocystis.
REFERENCE 1
AUTHORS Wincker,P.
TITLE Sequencing and annotation of the Blastocystis hominis genome
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1203)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2015) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1203)
AUTHORS Wincker,P.
TITLE Direct Submission
JOURNAL Submitted (12-FEB-2010) Wincker P., Genoscope - CEA, Sequencing, 2
rue Gaston Cremieux, F-91057, FRANCE
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NW_013171816).
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..1203
/organism="Blastocystis hominis"
/mol_type="mRNA"
/isolate="Singapore isolate B (sub-type 7)"
/db_xref="taxon:12968"
/note="scaffold_1"
gene <1..>1203
/locus_tag="GSBLH_T00006172001"
/db_xref="GeneID:24922297"
CDS 1..1203
/locus_tag="GSBLH_T00006172001"
/codon_start=1
/product="uncharacterized protein"
/protein_id="XP_012894745.1"
/db_xref="GeneID:24922297"
/db_xref="GOA:D8LYP2"
/db_xref="InterPro:IPR000212"
/db_xref="UniProtKB/TrEMBL:D8LYP2"
/translation="
MSDFISILDLKVNAAKSKSKSNVIQIPNSWNRENSLKKPEVFQWKDIEKNGYGVRLNEFYSAVEEQEEIVNQIKKILKGPAMAKTRSENSVEELVKENRFENHPMNHVIGVFFKTQKEVEQFCTLLKQEGLPYRGNEETSNFSEGINILRLLYDPNDSRSYDMMTVLQLPSLEISTTTLQTFIQNCKRNHQSLYETVKEALKTEANLPQNEWRNLSKLMSTIQSLHNQLLNYPGSYLLYQFYNRIHELPQIMNDSERQSSLIGLLNELMYLEDGHSPLLKSNSSSPFFKLHDYIDFLSFIPLFPSTSILDRLRSLQGHPLTKLLLTQCDSNPEEKDETSPIDSNVILVGTYADRYPNYFTVAHFVYSFISVSLFASVECFQDFTSSRQFFLFVPGMRHCP"
misc_feature <151..>777
/locus_tag="GSBLH_T00006172001"
/note="Superfamily I DNA or RNA helicase [Replication,
recombination and repair]; Region: UvrD; COG0210"
/db_xref="CDD:439980"
ORIGIN
atgagcgatttcatttcgattttggacttgaaagtgaatgctgcgaaatcaaaatcaaaatcgaatgtgattcagatcccgaactcatggaatcgagagaattctctcaagaaaccggaagtgtttcagtggaaagatatcgaaaagaacggctatggagtgcgattgaatgagttctattctgcagtggaggaacaagaagagattgtgaatcagatcaaaaagatcttgaagggtcctgcgatggcaaaaacaagatccgagaattcagtcgaggaattggtgaaagaaaatcggtttgaaaaccatccaatgaatcacgtcattggagtattcttcaagacacagaaagaagtcgagcagttctgcacgcttctgaaacaagaagggcttccctatcgtggaaacgaggaaactagcaacttttcggagggaatcaacattctccgtcttctttatgatccaaacgactctagaagttatgatatgatgacagtgttacaacttccttcgcttgaaatctccacaacgaccctccaaacttttattcagaactgtaaacgaaatcatcaaagtctttatgaaacggtgaaggaggcgttgaaaactgaagcgaatcttccacagaatgaatggagaaacttgtcgaaattaatgtcgacgatccaatcattgcataatcaattactgaattatcctgggtcttatcttctttaccagttttataatcgaattcatgaattaccacaaatcatgaacgattctgaacgccagtcttcattgattggtctgttgaatgaattgatgtatttggaagacggccattcgcctcttttgaaatcgaactcgtcttctccattctttaaacttcacgactacattgatttcctttcattcattcctctctttccttccacttccatcttggatcgattgcgaagccttcaaggccatcctttaacgaaacttcttcttacgcaatgtgactccaatccagaagaaaaggatgaaaccagcccaatcgattccaacgttattcttgtcggaacatacgcagatcgatatcccaattacttcacagtagctcattttgtgtattcattcatttcagtctctctttttgcctcagttgaatgcttccaggatttcacttcatcgcgtcagttcttcctgtttgttcccggaatgcgccattgtccctga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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