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2024-03-28 23:56:31, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_012791370            2018 bp    mRNA    linear   PRI 24-FEB-2017
DEFINITION  PREDICTED: Microcebus murinus claudin-34-like (LOC105885998),
            transcript variant X2, mRNA.
ACCESSION   XM_012791370
VERSION     XM_012791370.1
DBLINK      BioProject: PRJNA285159
KEYWORDS    RefSeq.
SOURCE      Microcebus murinus (gray mouse lemur)
  ORGANISM  Microcebus murinus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini;
            Lemuriformes; Cheirogaleidae; Microcebus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_033692.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Microcebus murinus Annotation
                                           Release 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Microcebus murinus"
                     /mol_type="mRNA"
                     /isolate="mixed"
                     /db_xref="taxon:30608"
                     /chromosome="X"
                     /sex="pooled male and female"
                     /tissue_type="liver; kidney"
                     /note="three separate animals were used in this assembly:
                     #8(Reference animal), 1886F (Citronella), 7006M (Rosehip)"
     gene            1..2018
                     /gene="LOC105885998"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 1 sample
                     with support for all annotated introns"
                     /db_xref="GeneID:105885998"
     CDS             1007..1783
                     /gene="LOC105885998"
                     /codon_start=1
                     /product="claudin-34-like isoform X2"
                     /protein_id="XP_012646824.1"
                     /db_xref="GeneID:105885998"
                     /translation="
MREQTVPQGFGVEPHPHWPPQASDVVLLPTRRITLTPFHSYVGHAATMTQVINGANHQVPGFVIATIGWILCTTSMGLVEWRVWHMDDPTFFPTGVACVGMWRVCIYHHDTNISTAKVCYRYSYSDDFLPFEVRSAQHLLLIASILGLLGRLFSILALRNVYVGITQKHACNPFILSGMLNLIAAACITLAVLQNYYSIKNLQGIAFPPSFYMPFKPDTQESGNAALVASIAAFLMLLSGLFFLCYKCPSKSQVHPAV"
ORIGIN      
tttgcttttttgaagaaacaagattatgctcatcacatagttttaaaatctgtttcttagcgatattggggactttttacttacttattcttcaacatagtgttgagtcactgtatgattccgattatgaggatagaaagtggcttcgtggacatagtctctacatgtggttttaggatctttgctttgagtcccagctgtcatctgagttacaaagttccttgggcgcgctttgcacttaactctttgtacacatttctgctcatttgattgggataaattccttattgtggaaaacactctaagccaaagattgcagtggaattttggcttctatataacatttactcctaagtgctggctagctgacatcacttatctttttggcagcgtaatttcttccaggagctccagtggaagctatcctcaatcttagcaagccaatttctcacaaattaggaatgatcttacacatcctgctggtcttacccctgtgtaccatgtcccaacaggcctctaagctgagactcaactagaaggagaccgtttcccatgaattagtctctcctaatatgttggttgtcagtggctttcacaaccaaagaggtggtgccacttctgccaacacctgcacttacattttccctttgcttaagaaatgtcatcacctccaggcggtattgggagattccatttcaggggagagcagagaagacgtgattaggaggcaggggactcagatggatcttgaagtgcactctgaaggtcgtctgaagaccccgtagtaaacacccccctaccaaggctacacatgataacggaagggaaccaggaccgtgctgtggccacatagaatgggcgctgccatggcatttgtgacctagccacatggaacctaggtgagggcagtgggcgacaacggaatgtggggacccggtgcaaggccgagggaagggcctcagagaagggccttggtgtggccgaggtgttagacagtctagacaagatgagggaacaaacagtcccgcagggcttcggagtggagccgcatccacactggcccccccaggccagtgacgtggtgctgctcccgactcgacgcatcactctgacaccgtttcacagttacgttgggcacgctgccaccatgacccaggtcatcaatggcgccaatcaccaagtgcctggtttcgttattgccaccataggatggatcctctgtacaacttccatgggccttgtggagtggcgagtgtggcacatggacgaccccacgttcttccccactggcgttgcctgtgtgggaatgtggagagtctgcatctaccatcatgacaccaacattagcacagccaaagtttgttatcggtactcctactctgatgactttctcccgttcgaggttcgtagtgctcaacacctcctgctgattgccagcattctagggctcctggggagactcttcagtatccttgcacttaggaatgtatacgtgggaatcactcagaagcatgcctgcaatccattcattctttcggggatgctgaatttaattgctgctgcctgtatcacacttgccgtgctccagaattactactctatcaaaaatttacaggggattgccttcccgccatctttctatatgcccttcaagccagatacccaggaaagcgggaatgccgctttagtggcaagtatagctgccttcctgatgctcttaagtgggttgttttttctctgttacaaatgtccctcgaagagccaagtgcatcctgcggtttgagaaacaggaatttcctggttgtgtgggctttgcaaatccaagattcccaagagtatatgggaagtattaccaggatgctctaccaaatatttccaaggactcaagacaatggcaaaggtagtttgggacacaaagtagccaactgtttccctctgtcacattgtgtgtctaaatgtggttcattgattggttagctgaatttagaactttcaataaaaatgtgtcttgcccacca
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]