LOCUS       XM_010350580            3088 bp    mRNA    linear   PRI 12-FEB-2021
DEFINITION  PREDICTED: Saimiri boliviensis boliviensis NRDE-2, necessary for
            RNA interference, domain containing (NRDE2), transcript variant X4,
            mRNA.
ACCESSION   XM_010350580
VERSION     XM_010350580.2
DBLINK      BioProject: PRJNA699579
KEYWORDS    RefSeq.
SOURCE      Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
  ORGANISM  Saimiri boliviensis boliviensis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Platyrrhini; Cebidae; Saimiriinae; Saimiri.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024100921.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Feb 12, 2021 this sequence version replaced XM_010350580.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Saimiri boliviensis Annotation
                                           Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3088
                     /organism="Saimiri boliviensis boliviensis"
                     /mol_type="mRNA"
                     /isolate="100643"
                     /sub_species="boliviensis"
                     /db_xref="taxon:39432"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="blood"
                     /dev_stage="adult"
                     /collection_date="2019-07-23"
                     /breed="Bolivian squirrel monkey"
     gene            1..3088
                     /gene="NRDE2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 mRNAs, 87 ESTs, 1 Protein, and
                     95% coverage of the annotated genomic feature by RNAseq
                     alignments, including 5 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:101050171"
     CDS             208..3030
                     /gene="NRDE2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2 isoform X3"
                     /protein_id="XP_010348882.1"
                     /db_xref="GeneID:101050171"
                     /translation="

MALFPAFAGVSETPDSGSSRKELDWLSNPSFCVGSITSRSQQTEAATAHVSEGSPLSRSPLKSEPSDESDTNKKFKQTSRKKKKEKKKRRKHQHHKKTKRKHGQSSSSRSETDTDSEKDKPSRTIGGSKKESEKPNQGNNAAADTGHRFVWLEDIQAVTGETFRTDKKPDPANWEYKSLYRGDIARYKRKGDSCLGINPAKQRISWEGTSTEKKHSHKQVERYFTKKSVGLMNIDGVAISSKTEPPSSDPASFIPVKDLEDAAPVTTWLNPLGIYDQSTTQWLQGQGPPEQESKQPDTQPDSESAALKARVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYAIEEGEQEKRKRSLKLILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQKLIFLHPNNTVLWQKYLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSILSHPALPGTEEAMFALFLQHCHFLRQAGHSEKAISLFQAMVDFTFFKPDSLKDMPTKGQVEFFEPFWDSGEPRAGEKGARGWKAWMHQQERGGWVVINPDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSLIRLSSQDLQFQLVEAFLQFLGVPSGFTLPASCLYLAMDENSIFDNGLYDEKPLTFFNPLFSGASSVGRMDRLGCPRWTRGQNREGEEFIRNVFHLVMPLFSGKEKSQLCFSWLQYEIGKVMWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENRNSFCLWKQYAHLEWLLGNTEDARKVFDTALGTAGSQGLKDSELCELSLLYAELEVELLPEVRGAASARAVHILTKLTESSPYGPYTGEVLAVHILKARKAYEHALQDCLGDSCVSDPAPTDSCTRLISLAKCFMLFQYLTIGIGAAVRIYEQVRRSRDPRHDS"

     misc_feature    691..981
                     /gene="NRDE2"
                     /note="MTR4-interacting domain (MID) found in nuclear
                     exosome regulator NRDE2 and similar proteins; Region:
                     NRDE2_MID; cd22200"
                     /db_xref="CDD:412062"
     misc_feature    order(691..717,724..729,739..744,748..750,754..798,
                     805..813,817..825,847..855,865..870,874..879,886..906,
                     931..942,952..981)
                     /gene="NRDE2"
                     /note="MTR4 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:412062"
     misc_feature    1144..2142
                     /gene="NRDE2"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:429988"
ORIGIN      

gctttgccctgccccctgccccgccttgtccccgtgccatgacgcccctcccctctgggccccgcccctcccgcttccgggtcaggccctagaaagcgccgggaaaaccacatttcccagagtgcaccgccacggcggggtcctcggaccggcgcttgctcgcctgcgccatttctgtagagaggaacggcggtgcggcctgtggtcatggcgctgttcccggcctttgcgggggttagtgagacccccgatagtgggagctccaggaaagagttagactggctgagcaacccaagcttttgtgtcggatccataacgtcccggagccaacaaactgaagcagccacagcccatgtttctgaagggtcaccactgtcaaggagtcctctgaaatcagagccttcagatgaaagtgacactaacaaaaagttcaaacaaacaagcagaaaaaagaagaaagagaaaaagaaaagaaggaagcaccagcatcataagaaaacaaagaggaaacatggacagtcgagtagcagcaggtctgagacagacactgattctgaaaaggacaaaccttccagaaccatcggaggcagtaaaaaggaatctgagaaaccgaatcaaggaaataatgctgcagctgatactggacatcgctttgtttggcttgaggacattcaggctgtgacaggagaaaccttcagaacagataagaaaccagatcctgcaaactgggagtacaagtctctctaccgaggggatatagcaagatacaagaggaaaggagactcctgccttggcattaatcctgcgaagcaacgcatatcttgggaagggacttccacagagaagaagcattcacacaagcaggttgaacgctattttactaagaagagtgtggggttaatgaacatcgatggagttgccattagcagtaaaactgaacctccatcatctgaccccgcctcctttataccagtgaaggacttggaagatgcagctcctgttacaacctggttgaatcctctggggatttatgatcagtcaactacacagtggttacaaggacagggtcctccagagcaggaatccaagcagccagacacacagccagacagcgagagtgcggctctcaaggccagggtggaggagttcaacaggagggtgcgggagaatccgcgggatacgcagctgtggatggcatttgttgcttttcaggacgaggtcatgaaaagtcctggcctgtatgccatcgaggaaggagagcaggaaaagcgaaagaggtccctgaagctcattctggagaagaagctggccattctggagcgggccattgagagcaaccagagcagtgtggatctgaaactggccaagctgaagctctgcacagagttctgggagccctccactctggtcaaagagtggcagaaactgatatttttacatcccaataatacggtcctttggcagaaataccttttgttttgccagagccagtttagtaccttttcaatatcaaaaattcacagtctttatggaaaatgcttgagcaccttgtctgctgtgaaggatggcagcatcttatctcaccctgcgttgcctggcacagaagaggccatgtttgccctctttcttcagcactgccactttctgcggcaggccggccactctgagaaggccatctcattgttccaggccatggtggacttcacattcttcaaacccgacagcctgaaagatatgcctaccaaaggacaggtagaattctttgagcccttttgggacagtggagagccccgggctggggagaagggagcccgaggctggaaggcgtggatgcaccagcaggagcgaggtggctgggtggtcatcaacccagacgaggatgacgatgaaccagaagaggacgatcaggaaataaaagataagactcttcccaggtggcagatctggcttgctgctgagcgttcccgagaccagaggcactggcggccctggcgccctgataagaccaagaagcaaaccgaggaagactgtgaggatcctgagagacaggtgttgtttgatgatattgggcagtctttgatcagactttcaagccaagatctgcagttccagctggtggaggcctttctgcagttcttgggtgtgccttctggcttcactcttccagcctcctgtctctatctggccatggatgagaacagcatctttgacaatggactttatgatgaaaagcccttgacttttttcaaccctttgttttccggggccagcagtgtgggccgcatggaccggctgggctgtcctcgctggaccaggggtcagaaccgagagggtgaggagttcatccgcaacgtcttccacctggtcatgcctttgttttcaggcaaagagaagtctcagctctgcttctcctggttacagtatgagattggaaaggtcatgtggtgtctgcacactaaaaacaagaagagattaaagtcacaagggaagaactgcaaaaaactcgccaagaatctccttaaggagccagaaaaccgcaacagcttttgcctctggaagcagtatgcccatctggagtggttgcttggcaacacagaggatgctaggaaagtttttgacacagcactcggcacggcaggaagccaaggactgaaggactctgaactctgtgagctcagtctgctctatgccgagctggaggtggagctgttgccggaagtgagaggggccgcctccgctcgagctgttcacatattaaccaagctgaccgagagcagcccctacgggccctatactggagaggtgttggctgttcacattttgaaagcacgaaaggcttacgagcacgcgctgcaggactgtttgggtgacagctgtgtctccgatccagctcccaccgattcctgtacccgcctaattagcttggccaaatgcttcatgctcttccagtatttgaccatcgggattggtgctgctgtacggatatacgaacaggttagacggtcgagagatccacgccacgattcctgagaccggcttaacacatcggatccaagccctgtttgaaaacgccatgcgcagcgacggt

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