2025-08-29 22:49:54, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS XM_009492934 3639 bp mRNA linear VRT 06-OCT-2014 DEFINITION PREDICTED: Pelecanus crispus testis- and ovary-specific PAZ domain-containing protein 1-like (LOC104038534), partial mRNA. ACCESSION XM_009492934 VERSION XM_009492934.1 DBLINK BioProject: PRJNA253833 KEYWORDS RefSeq; includes ab initio. SOURCE Pelecanus crispus (Dalmatian pelican) ORGANISM Pelecanus crispus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Pelecanidae; Pelecanus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_009065760.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pelecanus crispus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 89% of CDS bases ##RefSeq-Attributes-END## COMPLETENESS: incomplete on the 3' end. FEATURES Location/Qualifiers source 1..3639 /organism="Pelecanus crispus" /mol_type="mRNA" /isolate="BGI_N334" /db_xref="taxon:36300" /chromosome="Unknown" /sex="male" gene 1..>3639 /gene="LOC104038534" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:104038534" CDS 1..>3639 /gene="LOC104038534" /codon_start=1 /product="testis- and ovary-specific PAZ domain-containing protein 1-like" /protein_id="XP_009491209.1" /db_xref="GeneID:104038534" /translation="
MPQLRSGKVVTASDVKWADSMVTGPSSLGARVGREPGKKLVVKQSPPLAPKRKPEQTLSSCLQPAMLSSLSCEQFAPLVPMQKEQEEEIESTERRGISSLPEPEVLQPRKGTCSTEMKSTDSITILKVQIPDLKKNLGTRESSSEPKPQEEVDMPEKLDGCSLVGSRKPGTQEKRKRCLSKKGGTSFMKPKLQGPRERGTSAMLELHTQCPKSRKGAVSLRKRDRNALVSQRLQGLSGQGQPTARGKMHKHCVKEEQQSSNLQKGADSLGESAKEKWKALEHDSSTQAVKKLKTNQKRSEDSKEKEPHYSESPTLGGTQSKSFLCHPVTKKSGVQYKKRKPRIDQIKCLQSFSVTVAENVRNVSAKCDAEHCRNALSRCNGLLCATEKNPFVRLEACSYINTFVKSSASGTTSSYKLSGFFHVAQDKRKHVFPGGTVEQSDMNCSTSRMQNERSPIKGGLLFNNEKTQNKEGFFSCCQSENNKCLKGKRCNIGRKPRKKMKITEKSAVQNISTDMANECSESELQKEAAVAMSSSFAVLGRKHNEITLSASCDHTSNLHVGKNTHEAQNTSVWRKNSTKLLSFEDGFEKTLRLSVTGKGENSNSVAHHSAALGSLRVLAQVHDDSNCHKSKTHEKLKKVSKKLQQFTCQRTVPMTGKNVWPFESCARTSEWVHKNHGSISEGKRLLRAAFEESSDKSSVEAVGNSAVTGNLRRLGLHTSLAEINKESTHKIMDPNTECLTSLETPESSPMDIYETSRMSNENMESPVNMDRSAVAFSHDDVQEVKPMKVSNAGNLTKFKIPLCRNKPESRKLESVHSFERKTCSPLELLGSTSVSRRQKTGGENFLVNSKQQPLPVMSDAMSTASVKKKADEINCKDFQRNGSENLSNEVSALPEHFSLYPHPFLDGQLESSVPDFHGTEHVLKSDFPDHSWNAVDHPIALEINDDSKSRGNLSQHKSQNVPDVLEAYKEDALVIDVIQDDPDLFGTNNEEELALADCESCPVKASYTNICIKDRKQDLKPEYPVISEKRDSVGDNFRHITIQESGTSNDTENSCDWVLKAKDIKTYNSSRGSSPLGGVTKAFLEDGQLRELDKLLKSFDVDEKFRFADGVPDVKQEKKGDAAKRLNSDCKCKDLVSCELLSGLPLHPPKVNVLSEATVMKPQKNGIASHSVQRILEMIELPRKYCRFYFMTLRGCERAKCWFWHVPEQGDEK"
ORIGIN
atgccgcagttaaggtcagggaaagtggtaactgctagcgacgtgaagtgggctgacagcatggtcaccggcccaagctctctgggtgcgagggtaggacgtgagccagggaaaaagttggtagtcaagcagagtcctcccctggcaccaaagagaaagcctgagcagaccttatcttcctgtctgcaacctgccatgctctccagcctttcctgtgagcaatttgctcctcttgtgcccatgcagaaggagcaagaggaggaaattgagagcacagagagacgtggcatttcttctttgccagaaccagaggtgctgcaacccagaaagggcacatgtagcactgaaatgaaaagcactgactccataacgatactaaaggtgcaaatcccggatcttaagaagaatttggggactcgggaatcgtcgtctgaaccaaaacctcaggaagaggtagatatgccagagaagttggatgggtgttctttagttggatcaagaaagccagggacacaggagaaaagaaagagatgcttgagcaagaaaggcgggacatctttcatgaaaccaaaactacaaggtcccagagagaggggtacatctgccatgctagaactgcatacgcagtgcccaaagtccaggaaaggagctgttagtctgaggaagagggacagaaacgcactggtgtcacagcggctacagggtctaagcggccaaggacaaccaacagccagaggaaagatgcacaagcattgcgtgaaagaagagcagcagagctcaaaccttcagaaaggagcagacagcctgggggaaagtgcaaaggaaaaatggaaagcacttgagcatgactccagtacacaggctgtgaagaagcttaagacaaatcaaaagagatcagaagattccaaggaaaaggaacctcactactctgaatctcctactttaggtgggactcagagcaagagctttctatgccatcctgtaacaaaaaagtctggtgtgcagtataaaaaaaggaaacccagaattgatcaaatcaagtgcttgcaaagttttagtgtgactgtagctgaaaacgtgagaaatgtatctgcaaaatgtgatgctgaacattgcagaaatgccctgagccgttgtaatggcttgctctgtgcaacagaaaagaatccatttgtgagattagaggcctgtagttacatcaatacattcgtgaagtcttcagctagtggaactaccagcagttataaattaagtggattcttccatgtagcccaggataaaaggaagcatgtttttcctggtggtactgttgaacagagtgatatgaattgcagcactagtagaatgcaaaatgagagatcacccataaaaggtggtttattgtttaataacgaaaaaactcaaaacaaagaaggatttttttcatgctgtcagagtgaaaacaataagtgtttaaagggaaaaaggtgcaatattggtagaaagcctagaaaaaagatgaaaatcactgagaaatcagcagtgcagaatatttccacagacatggctaatgaatgcagtgagtctgagttacaaaaagaagcagcagttgccatgtcaagctcctttgcagttttaggacgaaagcataacgaaattactctgtcagcttcatgtgatcatacctcaaatcttcatgtaggaaaaaatactcatgaagcacaaaacacatcagtctggagaaagaacagtaccaaattactttcatttgaagatggctttgagaagacattgaggctctctgtaactggaaaaggagaaaattcaaacagtgtggcacatcattctgctgccttgggtagcctgagagtgctagctcaggtccatgatgattccaattgtcacaaaagcaagacacatgaaaaattgaagaaagttagtaagaaattgcagcagtttacctgtcaaagaacagtacctatgactggtaaaaatgtttggccttttgaatcttgtgccaggacttctgagtgggttcataaaaatcatgggtccatctcagaaggaaaaagacttttgagggctgccttcgaggaatcctctgataaaagcagtgttgaagctgtaggaaacagtgctgtgactgggaatttgagacggttgggtttgcatacatcattggcagaaattaacaaagaatctacacataaaataatggatccaaatactgaatgtctgacttcacttgaaacaccagaatcctctcccatggatatttatgagacttcgagaatgagcaatgaaaatatggaatcaccagttaatatggatagaagtgctgtggcttttagccatgatgatgtgcaagaagtcaaaccaatgaaagtatcaaacgctggaaacctgacaaaattcaaaattcctttatgcagaaacaaacctgaatccaggaaactggaatctgtccattcatttgaaagaaagacctgtagtccactagagcttcttggcagcactagtgtttcaagaaggcagaaaacaggtggagagaattttttggtaaattccaagcagcagcctcttcctgtcatgagtgatgctatgtctacagcttccgtaaagaaaaaagcagatgagatcaactgtaaggactttcagcgtaatggctctgaaaacctttcaaatgaggtgtctgcactccctgaacatttttctttatatccacatccttttcttgatggacagctagagtcatctgtgcctgatttccatggtactgaacatgtactaaaatctgattttcctgatcattcttggaatgcagttgaccaccctattgcattagaaataaatgatgatagcaaatcaagagggaatctttcacaacacaaaagtcaaaatgttccagatgttcttgaagcttacaaagaagatgctcttgtcattgatgtgattcaggatgaccctgacctttttggaaccaataatgaagaggagcttgcacttgcagactgtgaaagttgtcctgtgaaggcatcctatactaacatctgcattaaagacagaaagcaggatcttaagcctgagtatcctgttatctcagaaaagagagattcagtaggtgataattttagacacattaccatacaagaatcaggaacgtcaaatgatactgaaaattcctgtgattgggtgctaaaagctaaagatattaaaacctacaactcctccagaggaagcagtcctttgggaggtgttaccaaggcctttcttgaagatgggcaactgagagaactagataagcttttaaagagttttgacgtggatgaaaagttcaggtttgcagatggagtgcctgatgttaaacaagaaaaaaagggtgacgctgcaaaaagactcaacagtgactgtaaatgcaaagatcttgtgagctgtgaattgctatcaggattgccattgcatcccccgaaagtaaatgtcctcagtgaagctacagtgatgaaaccccagaaaaatggtatcgcttctcattcagtccagcggatcctcgagatgattgaattgccccgtaaatattgcagattttatttcatgactttgcgtgggtgtgaaagagcaaaatgttggttttggcatgttcctgagcaaggggatgaaaag
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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