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Previous release (v1)
2025-12-08 04:08:17, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_006882117 732 bp mRNA linear MAM 18-FEB-2014
DEFINITION PREDICTED: Elephantulus edwardii cysteine-rich secretory protein
2-like (LOC102847386), mRNA.
ACCESSION XM_006882117
VERSION XM_006882117.1
DBLINK BioProject: PRJNA221636
KEYWORDS RefSeq.
SOURCE Elephantulus edwardii (Cape elephant shrew)
ORGANISM Elephantulus edwardii
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae;
Elephantulus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_006399767.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Elephantulus edwardii Annotation
Release 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 5.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..732
/organism="Elephantulus edwardii"
/mol_type="mRNA"
/isolate="Elephantulus edwardi_28Jun2011"
/db_xref="taxon:28737"
/chromosome="Unknown"
/sex="female"
/geo_loc_name="South Africa"
gene 1..732
/gene="LOC102847386"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 29 Proteins"
/db_xref="GeneID:102847386"
CDS 1..732
/gene="LOC102847386"
/codon_start=1
/product="cysteine-rich secretory protein 2-like"
/protein_id="XP_006882179.1"
/db_xref="GeneID:102847386"
/translation="
MTLLSSVLFLVAVLLPSFPANGMVPNFASLSTMLNEIQEEIVNKHNSLRKNVSPTAQNMLKMTWDKNATVNAQKWADMCQYEHSRQELRTTDTTCGENLYMSSDPNSWSDAIQSWYDEVNDFTYGIGAKSLGAVIGHYTQVVWDTSYRVGCGLAHCPNEDLPYFYVCQYCPAGNYENRVSTPYKKGPTCASCPNDCEDGLCTNSCSYYDNYSNCAELKEQVTCEYELVKNYCKATCLCEGKIY"
misc_feature 106..516
/gene="LOC102847386"
/note="CAP (cysteine-rich secretory proteins, antigen 5,
and pathogenesis-related 1 proteins) domain of
cysteine-rich secretory proteins; Region: CAP_CRISP;
cd05383"
/db_xref="CDD:349402"
misc_feature 565..729
/gene="LOC102847386"
/note="Region: Crisp; pfam08562"
/db_xref="CDD:462519"
ORIGIN
atgactttactctcaagtgtgctgttcctggtggctgtgctgcttccatccttccctgcaaatggaatggttccaaattttgctagtttgtcaactatgttaaatgaaatacaagaagagattgtgaataaacacaacagtctaaggaaaaatgtttctcccacagcccaaaacatgctgaagatgacatgggacaaaaatgcaacagtaaatgctcaaaaatgggcagatatgtgccaatatgaacacagtcgtcaagaactacgaacaaccgatacaacatgtggtgagaatctctatatgtccagtgatcctaattcatggtcagacgccatccaaagttggtacgatgaagtcaatgattttacatatggtataggagcaaagagtcttggtgcagttattggacattatactcaggttgtttgggacacatcttaccgtgttggttgtggccttgctcattgtcccaatgaagatttaccctatttctatgtctgtcaatactgtcctgccggtaattatgaaaatagagtgagtaccccctacaaaaaaggaccgacttgtgccagttgccctaacgactgtgaagatggactatgcaccaatagctgcagctattacgataattacagtaactgtgcagagctgaaggaacaggttacctgtgaatacgaattggtcaagaactattgtaaagccacctgcctttgtgaagggaaaatttattaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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