2025-04-03 19:57:32, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_005706341 2170 bp mRNA linear PLN 05-JAN-2024 DEFINITION Galdieria sulphuraria uncharacterized protein (Gasu_26660), mRNA. ACCESSION XM_005706341 VERSION XM_005706341.1 DBLINK BioProject: PRJNA221242 BioSample: SAMN00011278 KEYWORDS RefSeq. SOURCE Galdieria sulphuraria ORGANISM Galdieria sulphuraria Eukaryota; Rhodophyta; Bangiophyceae; Galdieriales; Galdieriaceae; Galdieria. REFERENCE 1 (bases 1 to 2170) AUTHORS Schoenknecht,G., Chen,W.-H., Ternes,C.M., Barbier,G.G., Shrestha,R.P., Stanke,M., Brautigam,A., Baker,B.J., Banfield,J.F., Garavito,R.M., Carr,K., Wilkerson,C., Rensing,S.A., Gagneul,D., Dickenson,N.E., Oesterhelt,C., Lercher,M.J. and Weber,A.P.M. TITLE Gene Transfer from Bacteria and Archaea Facilitated Evolution of an Extremophilic Eukaryote JOURNAL Science (2013) In press REFERENCE 2 (bases 1 to 2170) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2170) AUTHORS Schoenknecht,G., Chen,W.-H., Ternes,C.M., Barbier,G.G., Shrestha,R.P., Stanke,M., Braeutigam,A., Baker,B.J., Banfield,J.F., Garavito,R.M., Carr,K., Wilkerson,C., Rensing,S.A., Gagneul,D., Dickenson,N.E., Oesterhelt,C., Lercher,M.J. and Weber,A.P.M. TITLE Direct Submission JOURNAL Submitted (23-JAN-2013) Department of Botany, Oklahoma State University, 104 Life Sciences East, Stillwater, OK 74078, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_005178455). FEATURES Location/Qualifiers source 1..2170 /organism="Galdieria sulphuraria" /mol_type="mRNA" /strain="074W" /db_xref="taxon:130081" /chromosome="Unknown" /geo_loc_name="Indonesia: Mount Lawu, Central Java" gene 1..2170 /locus_tag="Gasu_26660" /db_xref="GeneID:17088646" CDS 37..2055 /locus_tag="Gasu_26660" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_005706398.1" /db_xref="GeneID:17088646" /translation="
MKLLQSFCLLSLCIIFCLSPLLAEAADYERLCHCFQQDTSAFDLYKLVGTYSVTSCSSCNEKNCAALFGEQESDYNKLCAYIGESVVDAVESVLEGDFKSAETYMQDLISNQTTLIENYIDKLLGYLNNTLDGFRNEVGTNITVIEQEINEINTTFIAQDIQEAVTQIENYVSKDINEAITSLEVQIQKYAEKIEVNISEQLDIIETDIEQVNLTLVLDEIKKYAEKIEVNISEQLDIIETDIEQVNLTLVLDEIKKYAEKIEVNISEQLDIIETDIEQVNITLVLDEIKKYAEKIEVNISEQLDIIETDIEQVNITLVLDEIKKYAEKIEVNISEQLDIIETDIEQVNITLVLDEIKKYAEKIEVNISEQLDIIETDIEQVNLTLVLDEIKKYAEKIEVNISEQLDIIETDIEQVNLTLVLDEIKKYAEKIEVNISEQLDIIETDIEQVNITLVLDEIKKYAEKIEVNVTSDIDQAINTLKEFVDSVSVDVEANISLDINKAVKTLQDKVEDIEINITKQLKFIGDDIENLNETIVSEMLSFVENLSVNISIDTNETVTSINKTVTKIFEELERNLSLDFYDIVSNVNISLEDLDDEILKLIEDIASEVKEISEKNITVKVEDVLKEMLNINLNISLEQPTPPRRPVCNACQQPPCPYSPSCQMYQQQVGW"
misc_feature <394..1644 /locus_tag="Gasu_26660" /note="Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription, Signal transduction mechanisms]; Region: PspF; COG1221" /db_xref="CDD:440834" ORIGIN
cacatttaacgtttcttctctttgcttggaactggcatgaagttgttacaatctttttgtttactctcattgtgcattattttttgtttgagcccgcttttagcagaagctgctgattacgagagattgtgccactgtttccagcaagataccagtgctttcgatttatacaagcttgtgggaacgtactccgtaacatcatgttcttcgtgcaatgaaaaaaactgtgcagccctttttggagaacaagaaagtgactataataagctatgtgcgtatattggagaaagtgttgtcgatgcagtagaatcagtgctagaaggagatttcaagtcagctgaaacttatatgcaggatttgatctccaatcaaacaaccttgattgagaattatatcgacaagcttttgggatacttgaataatactttggacggttttcgaaatgaagtaggaacaaacataactgtgattgaacaagaaatcaatgagataaataccacttttatagcacaagatatccaagaggccgtcactcaaatcgaaaattatgtaagcaaagacatcaacgaagctataacgtcattggaagttcaaatacaaaaatatgcagagaagattgaagtcaatatctcagaacagttggatattattgaaacggatattgaacaagtcaaccttactttggtattggatgaaattaagaaatatgcagagaagattgaagttaatatctcagaacagttggatattattgaaacggatattgaacaagtcaaccttactttggtattggatgaaattaagaaatatgcagagaagattgaagtcaatatctcagaacagttggatattattgaaacggatattgaacaagtcaacattactttggtattggatgaaattaagaaatatgcagagaagattgaagtcaatatctcagaacagttggatattattgaaacggatattgaacaagtcaacattactttggtattggatgaaattaagaaatatgcagagaagattgaagtcaatatctcagaacagttggatattattgaaacggatattgaacaagtcaacattactttggtattggatgagattaagaaatatgcagagaagattgaagttaatatctcagaacagttggatattattgaaacggatattgaacaagtcaaccttactttggtattggatgaaattaagaaatatgcagagaagattgaagttaatatctcagaacagttggatattattgaaacggatattgaacaagtcaaccttactttggtattggatgaaattaagaaatatgcagagaagattgaagtcaatatctcagaacagttggatattattgaaacggatattgaacaagtcaacattactttggtattggatgaaattaagaagtatgcagagaagattgaagttaatgttacctcggatattgatcaagctataaacactttaaaggagtttgttgacagtgtttctgttgatgttgaggcaaacatttctctggatatcaataaagctgtcaagacgttgcaggataaagttgaagatatcgaaattaacatcaccaaacagcttaaatttatcggagacgatattgaaaacctgaatgaaactattgtgtcggagatgttgagctttgttgaaaatctatccgtaaatatctcgattgatacgaatgagactgtgacatccattaacaagacggtgacgaagatatttgaggagctcgaacgcaatcttagcttagatttttacgacattgttagtaacgttaacatttctttggaggatttggatgatgaaattttgaaacttatcgaggatatcgcttctgaggtgaaagaaatttctgagaaaaatataacggtgaaggtggaggatgtcttgaaggagatgctcaacattaatcttaatattagtttggagcaaccgacacctccaagaaggccagtttgtaacgcatgccagcagccaccctgcccttactccccatcttgtcaaatgtaccaacagcaagtcggttggtaatgcaacagtgtcagttgtagttagttgttgtcgaccttatttgaaagaaaatccgtagtctagtcatggtattatatacacgtgtttgtggtttagtaaagaatgtttccaggtt
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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