2024-04-25 04:34:01, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_004255584 858 bp mRNA linear INV 26-MAR-2013 DEFINITION Entamoeba invadens IP1 homeobox protein knotted-1, putative (EIN_475530) mRNA, complete cds. ACCESSION XM_004255584 VERSION XM_004255584.1 KEYWORDS RefSeq. SOURCE Entamoeba invadens IP1 ORGANISM Entamoeba invadens IP1 Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba. REFERENCE 1 (bases 1 to 858) AUTHORS Zafar,N., Inman,J., Hall,N., Lorenzi,H. and Caler,E. TITLE Direct Submission JOURNAL Submitted (24-OCT-2012) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_004440263). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..858 /organism="Entamoeba invadens IP1" /mol_type="mRNA" /strain="IP1" /host="green water snake" /db_xref="taxon:370355" /chromosome="Unknown" /country="USA" /collection_date="1952" gene <1..>858 /locus_tag="EIN_475530" /db_xref="GeneID:14887839" CDS 1..858 /locus_tag="EIN_475530" /note="encoded by transcript EIN_475530A" /codon_start=1 /product="homeobox protein knotted-1, putative" /protein_id="XP_004255632.1" /db_xref="GeneID:14887839" /translation="
MNVPSQTPVATNSLISVLSEECGLTKIDQNEVLKMFESKLVPVQVEVNDDWLLDFANNKALSYGTLFSDEIQKITSAFSSQVDVLNLYAEHYVNEMKKLLDTQAKRRTVAQNEVTTKVALVRSLFENIYNHLKALLVQSLKKCFDTENLPLPVGFPNITTDFGQTQHFYTNSQQSVVENTPQFTQATQNTFQFTQQMTQDTNFVNQFETQESFVAQPMFKNGRNYLDKRSKAILKKWFNEHYAYPYPSDEEKEVMAAQCGITMKQLNTWFSNYRSRSKKRAQRTN"
misc_feature 586..>855 /locus_tag="EIN_475530" /note="Homeodomain-containing transcription factor [Transcription]; Region: COG5576" /db_xref="CDD:227863" misc_feature 712..828 /locus_tag="EIN_475530" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN
atgaacgtaccatcacaaacaccggtagccacaaacagtctgatttcagtactatcagaggagtgtggcctaacgaagattgatcagaatgaggtgcttaaaatgtttgaatcaaagttagtacctgttcaagtcgaagtgaacgatgattggttgctcgactttgcgaacaataaagccctgagttatggtacattattttcagacgaaatccagaaaatcacttctgcgttttcctcacaagtcgatgtcttaaatttatatgcggaacattacgtcaatgaaatgaaaaagctcttggacacacaggctaagaggagaacagtcgcgcaaaatgaagtgacaacaaaagttgcactggtcagaagtctctttgagaatatatataaccacttgaaagcactcttagtccaaagtttaaagaagtgttttgacacagaaaacctccccttgccggtagggtttccaaatatcacaaccgattttgggcaaacgcaacacttctacaccaactcgcaacagagcgttgttgagaacacgccacagttcacacaggcgacacaaaacacatttcaatttacacaacaaatgacacaagacaccaattttgtgaatcagtttgaaacacaagaatcgtttgtagcgcaacccatgttcaaaaacgggagaaactacttggacaagagaagtaaagctattttgaagaagtggtttaacgaacactacgcatacccatacccatcagatgaggagaaagaagtgatggccgcccaatgtggtatcaccatgaaacaactgaacacgtggttttcaaattacagaagtagaagcaagaagagagcacagcggacgaactga
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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