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2024-03-29 16:27:14, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_003594878             684 bp    mRNA    linear   PLN 26-FEB-2021
DEFINITION  PREDICTED: Medicago truncatula UPF0481 protein At3g47200
            (LOC11444351), partial mRNA.
ACCESSION   XM_003594878
VERSION     XM_003594878.3
DBLINK      BioProject: PRJNA702529
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Medicago truncatula (barrel medic)
  ORGANISM  Medicago truncatula
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
            kb inversion clade; NPAAA clade; Hologalegina; IRL clade;
            Trifolieae; Medicago.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053043.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 23, 2018 this sequence version replaced XM_003594878.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Medicago truncatula Annotation
                                           Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Medicago truncatula"
                     /mol_type="mRNA"
                     /cultivar="Jemalong A17"
                     /db_xref="taxon:3880"
                     /chromosome="2"
                     /tissue_type="leaves"
                     /country="Australia"
     gene            <1..684
                     /gene="LOC11444351"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein, and 94% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:11444351"
     CDS             <1..684
                     /gene="LOC11444351"
                     /codon_start=1
                     /product="UPF0481 protein At3g47200"
                     /protein_id="XP_003594926.3"
                     /db_xref="GeneID:11444351"
                     /translation="
KTPECQTSYKFKIEHVLDLLRYNIRPKLIGEEPRGCQSQMIHSITELKKGGVKTKACESRELMDISFGKKWGIMVKELTIPPLYIGDHRGTVFRNIVAFEKCHKRCNLDMTTYMFFLNRLINSANDVSALHYKGVIHHSLGSDEHVAELINNIAKEIVPDMNESYLYKVVNEANEYLGCWRARFRASLVHNYLTSWAVGLSTIGALLALYFTFIQASFTLQSLLVFI"
     misc_feature    <34..627
                     /gene="LOC11444351"
                     /note="Plant protein of unknown function; Region: DUF247;
                     pfam03140"
                     /db_xref="CDD:427162"
ORIGIN      
aaaacccctgaatgtcaaacatcttacaagttcaaaattgaacatgttcttgatcttcttagatacaacataaggccaaaactcattggcgaagaaccaagaggatgtcagagccagatgattcattcaataacagaactaaaaaaagggggtgtgaaaactaaagcatgtgagagtagagaattgatggatataagctttggaaaaaaatggggaattatggtaaaggaactaactattccacctttgtacattggtgatcacagaggtactgtttttcgcaacatagttgcatttgaaaaatgtcacaagagatgcaatctagacatgacaacttacatgtttttcttaaacagactcataaactcagctaatgatgtttctgctcttcattataaaggggttattcatcattctttaggaagtgatgaacatgtcgcggaattgatcaacaacatagctaaagaaatagttcctgatatgaatgagtcatatttgtacaaagtggtgaatgaggcgaatgagtatttgggttgttggcgtgcgagattcagagcttcgcttgttcataactatttaacaagttgggctgtgggactttctacaataggtgctcttttggctctttattttacattcatacaagctagttttaccttgcaatctcttcttgtatttatataa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]