LOCUS       XM_002554759             444 bp    mRNA    linear   PLN 05-JUN-2017
DEFINITION  Lachancea thermotolerans CBS 6340 40S ribosomal protein S23 partial
            mRNA.
ACCESSION   XM_002554759
VERSION     XM_002554759.1
DBLINK      BioProject: PRJNA39575
            BioSample: SAMEA3138300
KEYWORDS    RefSeq.
SOURCE      Lachancea thermotolerans CBS 6340 (Kluyveromyces thermotolerans CBS
            6340)
  ORGANISM  Lachancea thermotolerans CBS 6340
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Souciet,J.L., Dujon,B., Gaillardin,C., Johnston,M., Baret,P.V.,
            Cliften,P., Sherman,D.J., Weissenbach,J., Westhof,E., Wincker,P.,
            Jubin,C., Poulain,J., Barbe,V., Segurens,B., Artiguenave,F.,
            Anthouard,V., Vacherie,B., Val,M.E., Fulton,R.S., Minx,P.,
            Wilson,R., Durrens,P., Jean,G., Marck,C., Martin,T., Nikolski,M.,
            Rolland,T., Seret,M.L., Casaregola,S., Despons,L., Fairhead,C.,
            Fischer,G., Lafontaine,I., Leh,V., Lemaire,M., de Montigny,J.,
            Neuveglise,C., Thierry,A., Blanc-Lenfle,I., Bleykasten,C.,
            Diffels,J., Fritsch,E., Frangeul,L., Goeffon,A., Jauniaux,N.,
            Kachouri-Lafond,R., Payen,C., Potier,S., Pribylova,L., Ozanne,C.,
            Richard,G.F., Sacerdot,C., Straub,M.L. and Talla,E.
  CONSRTM   Genolevures Consortium
  TITLE     Comparative genomics of protoploid Saccharomycetaceae
  JOURNAL   Genome Res. 19 (10), 1696-1709 (2009)
   PUBMED   19525356
REFERENCE   2  (bases 1 to 444)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2017) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 444)
  AUTHORS   Genoscope -,C.E.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2009) Genoscope - Centre National de Sequencage :
            BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr
            - Web : www.genoscope.cns.fr)
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_013082).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Lachancea thermotolerans CBS 6340"
                     /mol_type="mRNA"
                     /strain="CBS 6340"
                     /type_material="culture from type material of
                     Zygosaccharomyces thermotolerans"
                     /db_xref="taxon:559295"
                     /chromosome="F"
     gene            <1..>444
                     /locus_tag="KLTH0F14190g"
                     /db_xref="GeneID:8293031"
     CDS             1..444
                     /locus_tag="KLTH0F14190g"
                     /note="highly similar to uniprot|P32827 Saccharomyces
                     cerevisiae YGR118W RPS23A and to YPR132W uniprot|P32827
                     Saccharomyces cerevisiae YPR132W RPS23B Ribosomal proteins
                     28 (rp28) of the small (40S) ribosomal subunit, required
                     for translational accuracy"
                     /codon_start=1
                     /product="40S ribosomal protein S23"
                     /protein_id="XP_002554805.1"
                     /db_xref="GeneID:8293031"
                     /db_xref="GOA:C5DJ79"
                     /db_xref="InterPro:IPR005680"
                     /db_xref="InterPro:IPR006032"
                     /db_xref="InterPro:IPR012340"
                     /db_xref="UniProtKB/TrEMBL:C5DJ79"
                     /translation="

MGKGKPRGLNAARKLRVHRRNNYSRWAEQSYKKRLLGTAFKSSPFGGSSHAKGIVLEKIGIESKQPNSAIRKCVRVQLIKNGKRVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS"

     misc_feature    10..441
                     /locus_tag="KLTH0F14190g"
                     /note="40S ribosomal S23; Provisional; Region: PTZ00067"
                     /db_xref="CDD:185422"
     misc_feature    order(88..90,94..108,112..114,118..135,139..159,190..216,
                     232..240,262..264,268..279,316..336,343..354,370..375,
                     388..390,394..396,424..432)
                     /locus_tag="KLTH0F14190g"
                     /note="18S rRNA interaction site [nucleotide binding];
                     other site"
                     /db_xref="CDD:239465"
     misc_feature    order(190..195,346..348)
                     /locus_tag="KLTH0F14190g"
                     /note="streptomycin interaction site [chemical binding];
                     other site"
                     /db_xref="CDD:239465"
     misc_feature    193..198
                     /locus_tag="KLTH0F14190g"
                     /note="28S rRNA interaction site [nucleotide binding];
                     other site"
                     /db_xref="CDD:239465"
     misc_feature    order(196..213,274..300)
                     /locus_tag="KLTH0F14190g"
                     /note="aminoacyl-tRNA interaction site (A-site)
                     [nucleotide binding]; other site"
                     /db_xref="CDD:239465"
     misc_feature    301..303
                     /locus_tag="KLTH0F14190g"
                     /note="eEF2 interaction site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:239465"
ORIGIN      

atgggtaagggtaagccaagaggtttgaacgccgctagaaagttgcgtgtccacagaagaaacaattacagccgttgggccgaacaatcctacaagaagagattgctaggtactgccttcaagtcttctccattcggtggttcctctcacgccaagggtatcgtgttggaaaagatcggtatcgagtccaagcagccaaactctgctatcagaaagtgtgtcagagtccagctgatcaagaacggtaagagagtcactgcctttgtgccaaatgacggttgtttgaacttcgtcgacgaaaacgacgaagtcttgttggccggtttcggtagaaagggtaaggctaagggtgatatcccaggtgtcagattcaaggtcgtcaaggtctctggtgtctctttgctagctttgtggaaggagaagaaggagaagccaagatcctaa

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