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Previous release (v1)
2025-12-08 10:47:52, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_001390757 1086 bp mRNA linear PLN 21-FEB-2025
DEFINITION Aspergillus niger uncharacterized protein (An05g02260), partial
mRNA.
ACCESSION XM_001390757
VERSION XM_001390757.1
DBLINK BioProject: PRJNA19263
BioSample: SAMEA3283178
KEYWORDS RefSeq.
SOURCE Aspergillus niger
ORGANISM Aspergillus niger
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae;
Aspergillus; Aspergillus subgen. Circumdati.
REFERENCE 1 (bases 1 to 1086)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2025) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NT_166521).
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..1086
/organism="Aspergillus niger"
/mol_type="mRNA"
/db_xref="taxon:5061"
/chromosome="VII"
/map="unlocalized"
/clone="An05"
gene <1..>1086
/locus_tag="An05g02260"
/db_xref="GeneID:4980963"
CDS 1..1086
/locus_tag="An05g02260"
/EC_number="1.1.1.9"
/inference="profile:COGS:COG1063"
/inference="profile:PFAM:PF00107"
/inference="similar to AA sequence:UniProtKB:AF072541.1"
/note="Catalytic activity: xylitol + NAD(+) <=> D-xylulose
+ NADH.;
Cofactor: zinc 2+;
Similarity: similarities to L-Iditol 2-dehydrogenases (EC
1. 1. 1. 14).;
Title: strong similarity to xylitol dehydrogenase xdh -
Galactocandida mastotermitis;
See PMID 10661867"
/codon_start=1
/product="uncharacterized protein"
/protein_id="XP_001390794.1"
/db_xref="GeneID:4980963"
/db_xref="GOA:A2QL21"
/db_xref="InterPro:IPR002085"
/db_xref="InterPro:IPR002328"
/db_xref="InterPro:IPR011032"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="InterPro:IPR016040"
/db_xref="UniProtKB/TrEMBL:A2QL21"
/translation="
MENPSFVLRNIKDVVIEDRPKPILKDPHDVMVHVAQTGICGSDVHYWQRGRIGDFVLTGPMVLGHESAGVVVEVGDKVRHLKPGDRVAMEPGVPCRRCDYCRSGSYNLCGDTIFAATPPWDGTLAKYYVNAADFCYKIPDHMTLEEAAMVEPVSVAVAIAKTANLQAHQTVLVLGCGPIGVLCQAVAKAAGARTIIGVDVILSRLEVAKSYGIDHTFMPSRAEPGTDPMVHAERVAMXLKEELGLGEGADVVLECSGAEPCVQMGIYAARRGATFVQAGMGKENILFPITAVCTRGLTIKGSIRYLTGCYPAAIDLIAKGKIDVKRLITNRFPFEKAEEAFELVKAGRADVFKVMIAGVQE"
misc_feature 13..1074
/locus_tag="An05g02260"
/note="Sorbitol dehydrogenase; Region: sorbitol_DH;
cd05285"
/db_xref="CDD:176188"
misc_feature order(118..120,124..126,136..138,154..156,163..165,
193..195,340..342,349..351,451..453,838..840,907..912)
/locus_tag="An05g02260"
/note="inhibitor binding site [active]"
/db_xref="CDD:176188"
misc_feature order(118..120,124..126,193..198,451..453)
/locus_tag="An05g02260"
/note="catalytic Zn binding site [ion binding]; other
site"
/db_xref="CDD:176188"
misc_feature order(283..285,292..294,301..303,325..327)
/locus_tag="An05g02260"
/note="structural Zn binding site [ion binding]; other
site"
/db_xref="CDD:176188"
misc_feature order(463..465,529..537,592..600,610..612,655..657,
763..768,772..774,832..840,904..912)
/locus_tag="An05g02260"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:176188"
misc_feature order(469..471,502..504,508..510,556..558,565..573,
577..579,604..606,652..654,721..723,934..936,943..948,
955..957)
/locus_tag="An05g02260"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176188"
ORIGIN
atggagaacccctcatttgtcctgcgcaacatcaaagatgtagtcattgaagaccggcccaaacccatcctcaaagacccccatgatgtgatggtccatgtagcacaaacaggtatttgtggaagtgatgttcactactggcaacgcggtcgcatcggcgacttcgtcctcaccgggcccatggtcctcggccatgaatctgccggcgtagttgtcgaagtcggcgacaaagtccgacacctcaaacccggcgatcgcgtcgccatggaaccgggcgtaccctgtcgtcgctgcgactactgccgcagcggatcatacaacctctgtggcgatacgatcttcgctgcgaccccgccctgggacggcaccctcgccaaatactacgtcaacgccgccgacttctgctacaagataccggaccacatgacgctcgaggaagcagccatggtggagcccgtgtctgtggccgtggccatcgccaagacagccaacctgcaagcacaccagactgtgctggttctgggatgcggtccgatcggcgtactatgccaggccgtggctaaggctgccggagccaggaccatcatcggagtggatgtgattctgtcccgactggaggtagccaagtcgtacggcatcgatcacacattcatgccctcgcgggccgagcccggcactgacccgatggtgcatgcggagcgggtagcgatgcanttgaaggaggagctgggtctgggagaaggcgcagacgtggtgttggagtgctctggtgctgagccgtgtgtgcagatgggtatctacgcagcccgccggggagccacattcgtgcaggctggcatgggcaaggagaacattctgttccccattacggcggtgtgcacgcgtgggttgaccatcaagggatccattcggtatctgaccgggtgctatccggcggctatcgacttgattgccaagggcaagattgatgtgaagcggttgatcacgaataggttcccgttcgagaaggccgaggaggcattcgagttggtcaaggctggacgggcggatgtgttcaaagttatgattgcgggagtgcaggagtaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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