LOCUS       NM_001361678            3115 bp    mRNA    linear   PLN 03-SEP-2021
DEFINITION  Zea mays uncharacterized LOC100382704 (LOC100382704), mRNA.
ACCESSION   NM_001361678 XM_020540627
VERSION     NM_001361678.1
KEYWORDS    RefSeq.
SOURCE      Zea mays
  ORGANISM  Zea mays
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD
            clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
            Zea.
REFERENCE   1  (bases 1 to 3115)
  AUTHORS   Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J,
            Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes
            J, Walbot V and Yu Y.
  TITLE     Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs
  JOURNAL   PLoS Genet 5 (11), e1000740 (2009)
   PUBMED   19936069
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DV533137.1, CABHLF010000011.1 and BT065090.1.
            
            On Mar 29, 2018 this sequence version replaced XM_020540627.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR3147035.3233.1, SRR3147023.1551.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           SAMN00780084, SAMN00780085
                                           [ECO:0000350]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-215               DV533137.1         1-215
            216-789             DV533137.1         233-806
            790-810             CABHLF010000011.1  18881700-18881720   c
            811-947             CABHLF010000011.1  18881484-18881620   c
            948-1045            CABHLF010000011.1  18881309-18881406   c
            1046-1143           CABHLF010000011.1  18881112-18881209   c
            1144-1300           CABHLF010000011.1  18880880-18881036   c
            1301-1417           CABHLF010000011.1  18880626-18880742   c
            1418-1525           CABHLF010000011.1  18880437-18880544   c
            1526-1588           CABHLF010000011.1  18880279-18880341   c
            1589-1702           CABHLF010000011.1  18880082-18880195   c
            1703-1868           CABHLF010000011.1  18879619-18879784   c
            1869-1937           CABHLF010000011.1  18879477-18879545   c
            1938-3115           BT065090.1         1-1178
FEATURES             Location/Qualifiers
     source          1..3115
                     /organism="Zea mays"
                     /mol_type="mRNA"
                     /cultivar="B73"
                     /db_xref="taxon:4577"
                     /chromosome="7"
                     /map="7"
     gene            1..3115
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /note="uncharacterized LOC100382704"
                     /db_xref="GeneID:100382704"
     exon            1..215
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    203..205
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /note="upstream in-frame stop codon"
     CDS             206..2866
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /note="putative argonaute family protein"
                     /codon_start=1
                     /product="Protein argonaute 16"
                     /protein_id="NP_001348607.1"
                     /db_xref="GeneID:100382704"
                     /translation="

MPEHSMAAKMAGAVQVLKDDTVKRTPMARPSNGREGKPIRLLSNHFSVKLRGVDAVFYQYSVCIKSEDDKVVDSKGIGRKVIDKLLQTYCSELDGKDFAYDGEKCLFTVGPLPQNNFEFTVILEETSSRAAGGSPVHESPTQANKKRVKRSHLAKKFSVDISYAAKIPLQSVALALRGSESEHGQDVLRVLDVVLRQQQAKRGCLLVRQSFFSDDSRNLVDLTGGVSGCRGLHSSFRTTIGGLSLNMDVSTTMVVTPGPVIDFLVTNQNVRDIRDIDWPRAKKMLKNLRVKAKHNNMEFKIIGLSDQPCSRQMFPMKVRNGNIEIKSVDITVQDYFKSKQVELTMPYLPCLDVGKPKRPNYLPIELCHMVSLQRYTKALSSQQRAMLVEKSRQKPQERMRVVTDAVKSNMYDDDPILSSCGIEIEKQLTRVDARVLSAPALVVGNSEDCIPNRGRWNYNNKRLFDPVKIERWAIVNFSARCDMSRISRELINCGRSKGIFIECPHSLVDEDSQSRRCSPVERVEKMFEKVKASLPGPPEFLLCLLPERKNCDIYGPWKKKNLHEMGIVTQCIAPSNKMNDQYFTNVLLKINAKLGGMNSKLALEHRQMIPVVTQIPTLILGMDVSHGSPGRADIPSIAAVVGSRCWPLISRYRASVRTQSPKVEMIDSLFKPLDDGKDDGIMRELLLDFYQTSQQRKPKQIIIFRDGVSESQFSQVLNVELNQIIKAYQSMGQGDLPKFTVIIAQKNHHTKLFQADSPENVPPGTVVDSGIVHPRQYDFYMCAHAGPIGTSRPTHYHVLLDEIGFSADNLQKLVLSLSYVYQRSTTAISVVAPICYAHLAAAQMGQFMKFEEFADTSSGSVNSSSPPSIPELPRLHADVCSSMFFC"

     misc_feature    257..2863
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
     exon            216..388
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            389..591
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            592..810
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            811..947
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            948..1045
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            1046..1143
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            1144..1300
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            1301..1417
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            1418..1525
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            1526..1588
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            1589..1702
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            1703..1868
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            1869..1984
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            1985..2122
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            2123..2253
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            2254..2319
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            2320..2383
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            2384..2495
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            2496..2569
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            2570..2664
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            2665..2696
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
     exon            2697..3115
                     /gene="LOC100382704"
                     /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

cgaactgctggaccggagatggcctaaacatagggtttagaccgttgccgtccctactcccgcctagccgaccccactcgtcccagtcccagtcccagtccgccgcctggttccttcttgctcttccctccactctctacagacgcagattgacaaggaagagagagagaggccgaggggaggaggcgtcgtcgtcttcttctgaatgcctgaacatagtatggctgccaaaatggctggagctgtccaagtgctcaaggatgacactgttaaacgcacacccatggcacgacctagtaacggccgtgaaggaaagcccattaggttgctgtcgaaccacttctcagtgaagcttagaggagttgatgctgttttctaccaatacagtgtctgcatcaaatctgaggatgataaggtggttgatagcaagggtattggccgaaaggtcatagataaactattgcaaacatactgttctgagcttgatgggaaggattttgcatatgatggagagaaatgtctatttactgtgggacctcttccacagaataactttgagttcactgttatcttggaggaaacatcttcaagggctgctggtggaagtccagtgcatgaaagccctactcaagctaacaaaaagcgagtcaagcgatcacatctggcaaaaaagttcagtgtagacataagttatgccgcaaagattcctcttcagtcggttgctttggctcttcgaggaagcgagtcagaacatggtcaagatgttctgagagtccttgacgttgttttaaggcaacagcaggctaagagaggttgtctacttgttagacagtcatttttcagtgatgatagtcgaaaccttgttgatttaactggtggagttagtggttgtcgtggactccactctagtttccgtactacaattggtggtctttcactaaatatggatgtttcaaccactatggttgtaactcctggaccagttattgattttctcgtcacaaatcaaaatgtaagagacatcagagatattgactggcccagggccaagaaaatgcttaaaaatctcagagttaaagctaagcacaacaacatggagttcaagattattggccttagtgatcaaccatgctctagacagatgttcccaatgaaagttcgaaatggaaacatcgaaattaaatctgttgatatcactgttcaggattattttaaatccaagcaagttgagctaacaatgccttatctgccatgtcttgatgtgggaaaaccaaaacgccctaattatctcccaattgagttatgccacatggtatcacttcaacgttatacaaaggcactgtcttctcaacaaagggcaatgttggttgaaaagtcacgacagaaacctcaagaaagaatgcgagttgttacagatgctgtaaaaagtaatatgtatgatgatgatccaatcttatcttcatgtggtattgaaattgagaaacaacttactcgtgttgacgctcgtgttctctctgcaccagcgctagttgtgggcaacagtgaagattgcatcccaaacaggggtaggtggaactacaataataagaggctattcgatccagtcaagattgagcgttgggccattgttaatttctctgctcgttgtgacatgagccgaatctcaagagaactgataaactgtggacgcagcaaaggcattttcattgaatgtcctcacagtttggtggatgaggacagccagtctaggagatgttcacctgtggaaagggttgaaaagatgtttgaaaaagtcaaagcaagccttcctggtcctccagagtttctcctttgtcttttaccagagaggaagaattgtgatatttacgggccatggaagaagaaaaatcttcatgaaatgggtattgtcactcaatgcattgctccaagtaataagatgaatgatcaatatttcaccaatgttcttctaaaaattaatgctaagcttggtggaatgaactccaaactggcactggaacatcgtcaaatgataccagttgtgactcaaataccaacattaattcttggcatggatgtttcacatggttctccaggtcgagcagatataccatcaattgctgcggttgttggatctagatgctggccattgatatcacggtacagagcatctgtgcgcacccagtctccaaaggtagagatgattgattctctatttaagccactggatgatgggaaggatgatggcataatgagggaacttctactagacttctaccaaaccagtcaacaaagaaagcctaagcagataatcatcttcagggatggtgttagcgagtctcagtttagccaagtactgaacgtagaacttaatcaaattataaaggcatatcagagtatgggacagggggaccttccgaagttcacagtgatcattgctcaaaagaatcaccacacaaaactcttccaagctgattcaccagagaacgttccacctgggactgttgtggactccggcatagttcatccaagacagtatgatttctacatgtgtgctcatgccggaccaattggtacttcaaggccaacccattaccatgtgttgcttgatgagattggcttctctgcagataatctccagaagctagttctttcactttcatatgtgtaccagaggagcaccactgcgatttctgtggtggcacctatctgttatgcccacctcgcagcagctcagatgggccagttcatgaaatttgaagagtttgcagatacgtcgtcagggagtgtcaattcatcatcgccaccatcaataccagaattgccacggctgcatgctgatgtctgcagttccatgttcttctgttgacgtgattttagtttgaccgttgtggggtagggccaattctttgtgaaaggaaccttaccttatatgttggcacacagcaggctaaccgtttttgtgaagaaaccatgtaggtcgttagttgtcgtatatcgcacgcgtgcatctttttggagcggttttcggctccccccacccacaggtggcggttccgttaggtacagtttccagattttaacgatgctaatacagtaaaagcagtttgtacattct

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