GGRNA ver.2 Home | Help | Advanced search    Previous release (v1)

2024-03-29 10:54:38, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_001310985            1212 bp    mRNA    linear   VRT 13-MAY-2020
DEFINITION  Esox lucius claudin-4-like (LOC105029545), mRNA.
ACCESSION   NM_001310985 XM_010902993
VERSION     NM_001310985.1
KEYWORDS    RefSeq.
SOURCE      Esox lucius (northern pike)
  ORGANISM  Esox lucius
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;
            Esociformes; Esocidae; Esox.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BT078977.1.
            
            On Jul 21, 2015 this sequence version replaced XM_010902993.2.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BT078977.1 [ECO:0000345]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1212
                     /organism="Esox lucius"
                     /mol_type="mRNA"
                     /db_xref="taxon:8010"
                     /chromosome="1"
                     /map="1"
     gene            1..1212
                     /gene="LOC105029545"
                     /gene_synonym="CLDY"
                     /note="claudin-4-like"
                     /db_xref="GeneID:105029545"
     CDS             73..837
                     /gene="LOC105029545"
                     /gene_synonym="CLDY"
                     /note="Claudin-like protein ZF-A89"
                     /codon_start=1
                     /product="claudin-4-like"
                     /protein_id="NP_001297914.1"
                     /db_xref="GeneID:105029545"
                     /translation="
MGRIAKEVSAQVLGVIGLVGVALTTGIPMWRVTSYIGANIVTAQIVWDGLWMNCVMQSTGQMQCKINWSVMSLSTDLQASGALVVISILVTFVGLIFAFVGGKCTSCLKSDSSKSKMTILGGALLILGAVLVIIPVSWSAAITIFDYNNPLLIATQKRELGASIFIGWGSGALLIIAGILLCSSCPPKKEYGYPGYPQRAPLYSYPGQPMVQTGPYGRIYTPTSRPYSGTGSYAPSKPYGAPVAYTTPGRPQYI"
     misc_feature    109..615
                     /gene="LOC105029545"
                     /gene_synonym="CLDY"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:451326"
ORIGIN      
ggggggacagctctaaggatccagaccaagcaactacacttttcccactcacccacgacacagcctctcgtcatggggaggattgccaaggaggtgtcggcccaggtgcttggggtcattggcctcgtgggggtagcgctgaccactggcatccccatgtggagggttacctcgtacatcggtgccaacatcgtgacagctcagattgtgtgggatggcctgtggatgaactgtgtgatgcagagtactggacagatgcagtgtaagatcaactggtcagtcatgagtctatccactgacctccaggcatcgggggccttggtcgtcatctccatccttgtcacctttgtgggcctgattttcgccttcgtcgggggcaagtgtaccagctgcctgaagtctgattcttccaagagtaaaatgacaatcctcgggggcgccttgctgatccttggtgccgttttggtcatcatccccgtctcctggtcggcagcaatcaccatctttgactacaataaccctctgctcattgccacccagaagagagagcttggagcttcaatcttcattggctggggctccggtgcgctgctaatcattgcggggattctcctctgctcttcatgccctcctaagaaagagtatgggtacccaggatatcctcaaagggcacccctgtactcctatccagggcaacccatggtccagacagggccttacgggagaatttacaccccaaccagcagaccatactcagggacagggtcatatgcaccaagcaagccatacggtgcgccagtagcatacactacccctggacgcccgcagtatatctgacaaaacggagtggacggggggaaagctcacttaaaatggaccaatctacctggatgcttttgagatattgtttttgtctttgtgtaatgtcaccacaaatatgctgaagttgtgtactttcatccacattcgttgttgtgttgataggtagtgatgatgtattttcattcaatctgtaaacatgaaaattattcagggtgaatggcattcattatgtttaagagtgtaatgctgttcatttaagtgttgactgtaaaaatccttgtcttcaaatcaaacccaaagcaactgttatttgtcatattaattaaaatgggttgactaacttatgcgacattttcccaaaatgctcagaaatagatacaaaagaaatac
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]