2024-04-26 07:22:21, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001266223 1841 bp mRNA linear PRI 21-FEB-2022 DEFINITION Macaca mulatta NK3 homeobox 1 (NKX3-1), mRNA. ACCESSION NM_001266223 XM_001106266 VERSION NM_001266223.1 KEYWORDS RefSeq. SOURCE Macaca mulatta (Rhesus monkey) ORGANISM Macaca mulatta Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca. COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JV636177.1. On May 25, 2012 this sequence version replaced XM_001106266.2. ##Evidence-Data-START## Transcript exon combination :: JV636177.1, JV062052.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4688330, SAMEA4688333 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..1841 /organism="Macaca mulatta" /mol_type="mRNA" /db_xref="taxon:9544" /chromosome="8" /map="8" gene 1..1841 /gene="NKX3-1" /note="NK3 homeobox 1" /db_xref="GeneID:710591" /db_xref="VGNC:VGNC:75355" CDS 41..739 /gene="NKX3-1" /codon_start=1 /product="homeobox protein Nkx-3.1" /protein_id="NP_001253152.1" /db_xref="GeneID:710591" /db_xref="VGNC:VGNC:75355" /translation="
MLRATEPLPGEAKAEGAAPPTPSKPLTSFLIQDILRDGAQRRGGHTDSPRRRDPEPEPEPEGGRGPAGVQNDQLSPRPRAAPEEAETLAETEPERHLGSYLLDCENTSGSLPSLPQTPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQLSSELGDLEKHSSLPALKEEAFSRASLVSLYNNYPYYPYLYCVGSWSPAFW"
misc_feature order(407..421,425..427,476..478,494..496,533..535, 539..544,551..556,560..568,572..577) /gene="NKX3-1" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 413..574 /gene="NKX3-1" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(413..415,422..424,542..544,551..556,563..565) /gene="NKX3-1" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" ORIGIN
cgcggggctggcgcagcgaggccagaacggggcagccgggatgctcagggctacggagccgctgcccggggaggcgaaagcggagggggccgcgccgccaaccccgtccaagccgctcacgtccttcctcatccaggacatcctgcgggacggcgcgcagcggcgaggcggccacacggacagcccgagacggcgcgacccggagccagagccagagccggagggaggacgcggccccgccggggtacagaacgaccagctgagccccaggccccgcgccgcgccggaggaggccgagacgctggcggagacggagccagaaaggcacttggggtcttatctgttggactgtgaaaacacttcaggctcccttccaagcctcccccaaacccctaagcagccgcagaagcgctctcgagctgctttctcccacactcaggtgatcgagttggagaggaagttcagccatcagaagtacctgtcggcccctgaacgggcccacctggccaagaacctcaagctcacggagacccaagtgaagatatggttccagaacagacgctataagactaagagaaagcagctctcctcggagctgggagacttggagaagcactcctctttgccggctctgaaagaggaggccttctcccgggcctccctggtctccttgtataacaactatccttactacccatacctgtactgcgtgggcagctggagcccagctttttggtaatgccagctcaggtgacaaccatgtatgatcaaaaactgctttccccagggtgtggctatgaaaagcacaaggggccaaggtcagggagcaagaggtgtgcgcaacaaagctattggagatttctgtggaaatctcacatcttcactactgagacaatgaaacaacagagacagtgaacgttttaatatctaagtctgtcccccagtgcatactgtaggtcatttttttgcttctggctacctgtttgaaggggagagagggaaaatcaagtgctgttttcagctctttgcatgattttggaggaactgtacacgtgaggattctgttctacaactccatcctcctgtgtcactgaatatcaactctgaaagagcaaacctaacgggagaaaggacagccaggacgaggatgtcaccaactgaattaaacttaagtccagaagcctcctgttggccttggaatatggccaaggctctctctgtccctgtaaaagagtggggcaaatagagggtctccaagagaacaccctcatgcttagcacacatttgcatgggagggggagatgggtgggaggagatgaaaatatcagctgcttcttattcctttttattccttttaaaatggtatgccaacttaagtatttacagagtggcccaaatagaacaagatgcactggctgtgattttaagacaagctgtataaacagaactccactgcaagaggtggggccgtgccaggagaatctccacatgtccaagacaggagcctaaggagggtctccacactgctgctcgggactgttgcgttttttgttagcagaaagtggaaaggactctcctcaacttttttcttccagactggagaatttagaatcagaagtttcctggagttttcaggctatcatatatactgtatcctcagaggcaacatatttcttccttccctccttttacaattttttgttccttttttgcagcaattactcactaaagggcttcattttagtccagacttttagtctggctgcacctaacttatgcctcacgtatttagcctgagatcccgagatctggtcttttttttttttttttttttttttttg
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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