2024-04-26 02:42:54, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001168897 813 bp mRNA linear PRI 27-JUN-2020 DEFINITION Papio anubis homeobox A5 (HOXA5), mRNA. ACCESSION NM_001168897 VERSION NM_001168897.1 KEYWORDS RefSeq. SOURCE Papio anubis (olive baboon) ORGANISM Papio anubis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio. COMMENT INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from DP000507.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN02045697, SAMN02045698 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..813 /organism="Papio anubis" /mol_type="mRNA" /db_xref="taxon:9555" /chromosome="4" /map="4" gene 1..813 /gene="HOXA5" /note="homeobox A5" /db_xref="GeneID:100137361" CDS 1..813 /gene="HOXA5" /codon_start=1 /product="homeobox protein Hox-A5" /protein_id="NP_001162368.1" /db_xref="GeneID:100137361" /translation="
MSSYFVNSFCGRYPNGPDYQLHNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLSVGRSGSGHFGSGERARSYAASASAAPAEPRYSQPATSTHSPPPDPLPCSAVAPSPGSDSHHGGKNSLSNSSGASANAGSTHISSREGVGTASGAEEDAPASSEQASAQSEPSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP"
misc_feature order(586..600,604..606,655..657,673..675,712..714, 718..723,730..735,739..747,751..756) /gene="HOXA5" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature order(592..594,601..603,721..723,730..735,742..744) /gene="HOXA5" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 595..753 /gene="HOXA5" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" exon 1..562 /gene="HOXA5" /inference="alignment:Splign:2.1.0" exon 563..813 /gene="HOXA5" /inference="alignment:Splign:2.1.0" ORIGIN
atgagctcttattttgtaaactcattttgcggtcgctatccaaatggcccggactaccagttgcataattatggagatcatagttccgtgagcgagcaattcagggactcggcgagcatgcactccggcaggtacggctacggctacaatggcatggatctcagcgtcggccgctcgggctccggccactttggctccggagagcgcgcccgcagctacgcggccagcgccagcgcggcgcccgccgagcccaggtacagccagccggccacgtccacgcactcgcctccgcccgacccgctgccctgctccgccgtggccccctcgcccggcagcgacagccaccacggcgggaaaaactccctgagcaactccagcggcgcctcggccaacgccggcagcacccacatcagcagcagagagggggttggcacggcgtccggagccgaggaggacgcccctgccagcagcgagcaggcgagtgcgcagagcgagccgagcccggcgccgcccgcccaaccccagatctacccctggatgcgcaagctgcacataagtcatgacaacataggcggcccggaaggcaaaagggcccggacggcctacacgcgctaccagaccctggagctggagaaggagttccacttcaaccgttacctgacacgccgaagaaggattgaaatagcacatgctctttgcctctccgagagacaaattaaaatctggttccaaaaccggagaatgaagtggaaaaaagataataagctgaaaagcatgagcatggccgcggcaggaggggccttccgtccctga
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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