LOCUS       NM_001098096            2014 bp    mRNA    linear   MAM 03-FEB-2022
DEFINITION  Bos taurus claudin 8 (CLDN8), mRNA.
ACCESSION   NM_001098096 XM_582512
VERSION     NM_001098096.1
KEYWORDS    RefSeq.
SOURCE      Bos taurus (cattle)
  ORGANISM  Bos taurus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bos.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   McMillan M, Andronicos N, Davey R, Stockwell S, Hinch G and
            Schmoelzl S.
  TITLE     Claudin-8 expression in Sertoli cells and putative spermatogonial
            stem cells in the bovine testis
  JOURNAL   Reprod. Fertil. Dev. 26 (5), 633-644 (2014)
   PUBMED   23673210
  REMARK    GeneRIF: We found that CLDN8 was expressed by both spermatogonia
            and a subset of Sertoli cells in the bovine testis.
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D,
            Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Marcais G,
            Roberts M, Subramanian P, Yorke JA and Salzberg SL.
  TITLE     A whole-genome assembly of the domestic cow, Bos taurus
  JOURNAL   Genome Biol. 10 (4), R42 (2009)
   PUBMED   19393038
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC134660.1.
            
            On May 24, 2007 this sequence version replaced XM_582512.3.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC134660.1, SRR6764281.18045.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Bos taurus"
                     /mol_type="mRNA"
                     /db_xref="taxon:9913"
                     /chromosome="1"
                     /map="1"
                     /breed="L1 Hereford"
     gene            1..2014
                     /gene="CLDN8"
                     /note="claudin 8"
                     /db_xref="BGD:BT29403"
                     /db_xref="GeneID:538761"
                     /db_xref="VGNC:VGNC:27419"
     exon            1..1990
                     /gene="CLDN8"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    67..69
                     /gene="CLDN8"
                     /note="upstream in-frame stop codon"
     CDS             88..765
                     /gene="CLDN8"
                     /codon_start=1
                     /product="claudin-8"
                     /protein_id="NP_001091565.1"
                     /db_xref="BGD:BT29403"
                     /db_xref="GeneID:538761"
                     /db_xref="VGNC:VGNC:27419"
                     /translation="

MATYALQIAGLVLGGVGMVGTVAATVMPQWRVSAFIESNIVVFENLWEGLWMSCMRHANIRMQCKIYDSLLALSPDLQAARGLMCAASVLAFLAFLTAVLGMKCTRCAGDDDKVKGHILLTAGVIFIITGLVVLIPVSWVANSIIRDFYNPIVDIAQKRELGEALYIGWTTALVLIVGGALFCCVSCCHEKSSSYRYSIPSHRTTQKSYHAEKKSPSVYSKSQYV"

     misc_feature    100..633
                     /gene="CLDN8"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:451326"
ORIGIN      

gctctccctcggggcgcagagaacctggcttcagagcagccttaccagctcaggcgcctggtcggataaaacccaacctggaggagaatggctacctacgccctgcaaatcgccggactggtgctcggtggtgtgggcatggtgggcacagtggctgccacggtcatgcctcagtggagagtgtctgccttcattgaaagcaatattgtggtctttgaaaacctctgggaaggactatggatgagttgcatgaggcatgctaacatcagaatgcagtgcaaaatctacgactcgctgctggctctctctccggacctacaggcagccagaggactgatgtgtgccgcctcggtgctggccttcttggctttcctgacggccgtcctcggcatgaagtgtaccagatgcgccggggacgacgacaaggtgaaaggtcacattctgctgaccgctggagtgattttcatcatcactggcctcgtggtgctcatccccgtgagctgggttgccaattccatcatcagagacttctacaacccaatagtggatattgcccagaaacgggagctgggagaagccctctacataggctggaccacggccctggtgctgattgttggaggggcgctgttctgttgcgtttcctgttgccatgaaaagagcagtagctacagatactccataccgtcccaccgaacaacccagaaaagctatcacgccgaaaagaagtcgccgagtgtgtactccaaaagtcagtacgtgtagttatgactctttttaaactacctagaaagccacccagatgacatagatgtccactcttcccaaaactgagacccaaaagaacattgattggctgttcttaactgcctggtattaatcacagggactgattacatcagctctttatgattctataatcaatttcagctgcatgagaaattgtacacattgctttgattattctagaaagaacagtaatttgttttctaaaatggttcatgttttatctccttttattagttacttcaaaatgacattgttggagacaattattttacaactgtgatttctctatgacagagcattatgtatatagatgagtgtaacatttctgtgtcacataggtagagacaggcttatatagtcctattttaaatgaaacactgattcattacactgaataaatagaattcagctattgcttttcaggggaaccaggggtaagattgaagaaggttaatattaattgtttaaaaacagcttagtgatgaatgcacttaatttataatgaaggttaaaatgaaagctttaatcagcagggtaaagggaactaaatggctttttgatatctcgtttttcagcctaggagttagaaatccaaattcctttttcctcattccccagaggccttccttttcttgtatattaaatggtcatcttttaaaaggcagatattttgtcaaggggctttgcattcaaactgcttttccagagctatactaagaagaaagataaagctatagtctaagaaatattaaagacttcaggaaagtgaagatttttttcctcaagtttttgtggttggagaaggatacattttgacaagaaatcatatatatatatatattttaataactatttgtatagagactttggactttcattaatataaataacagaagagaaaaattatatacctttatttgattaccaaaaaaatgaaaccaaattgtcctctgtgaactacatcttatatgtggatatttaagtcagaattgtcatttcagttttcaaaggtgaatctttctttgttccaattttgttcagttttactaaggcacaggtatactatatttttgtgtttcccccagattttattgaactgttaatctgatttgaaagtttgtatatacatttttctagcttaatcaactatgtgtatctgctttatgtcctttgtattaataaattgtgctttttatattaaaaaaaaaaaaaaaaaaaaaaaaaa

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