GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2026-10-05 17:52:54, GGRNA : RefSeq release 233 (Jan, 2026)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Homo sapiens microfibril associated protein 5 (MFAP5), transcript variant 1, mRNA. (2872 bp)
isoform a precursor" /protein_id="NP_003471.1" /db_xref="CCDS:CCDS8595.1" /db_xref="GeneID:8076" /db_xref="HGNC:HGNC:29673" /db_xref="MIM:601103" /translation="MSLLGPKVLLFLAAFIITSDWIPLGVNSQRGDDVTQATPETFTEDPNLVNDPATDETVLAVLADIAPSTDDLASLSEKNTTAECWDEKFTCTRLYSVHRPVKQCIHQLCFTSLRRMYIVNKEICSRLVCKEHEAMKDELCRQMAGLPPRRLRRSNYFRLPPCENVDLQRPNGL" sig_peptide 203..286 /gene="MFAP5" /gene_synonym="AAT9; MAGP-2; MAGP2; MFAP-5; MP25" /inference="COORDINATES: ab initio prediction:SignalP:6.0" misc_feature 209..631 /gene="MFAP5" /gene_synonym="AAT9; MAGP-2; MAGP2; MFAP-5; MP25" /note="Microfibril-associated...
AA_position 136
Synonym: AAT9; MAGP-2; MAGP2; MFAP-5; MP25
NM_003480.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens 5'-nucleotidase ecto (NT5E), transcript variant 1, mRNA. (3562 bp)
KIIALGHSGFEMDKLIAQKVRGVDVVVGGHSNTFLYTGNPPSKEVPAGKYPFIVTSDDGRKVPVVQAYAFGKYLGYLKIEFDERGNVISSHGNPILLNSSIPEDPSIKADINKWRIKLDNYSTQELGKTIVYLDGSSQSCRFRECNMGNLICDAMINNNLRHTDEMFWNHVSMCILNGGGIRSPIDERNNGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGGIHVVYDLSRKPGDRVVKLDVLCTKCRVPSYDPLKMDEVYKVILPNFLANGGDGFQMIKDELLRHDSGDQDINVVSTYISKMKVIYPAVEGRIKFSTGSHCHGSFSLIFLSLWAVIFVLYQ" sig_peptide 58..135 /gene="NT5E" /gene_synonym="CALJA; CD73; E5NT; eN; eNT; NT; NT5; NTE" /inference="COORDINATES: ab initio prediction:SignalP:6.0" proprotein 136..1779 /gene="NT5E" /gene_synonym="CALJA; CD73; E5NT; eN; eNT; NT; NT5;...
AA_position 512
Synonym: CALJA; CD73; E5NT; eN; eNT; NT; NT5; NTE
NM_002526.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens microtubule crosslinking factor 1 (MTCL1), transcript variant 1, mRNA. (7013 bp)
HARPAAPGPAVPSSGRAPAPAAPRSPNLAGKAPPSPGSLAAPGRLSRRSGGVPGAKDKPPPGAGARAAGGAKAALGSRRAARVAPAEPLSRAGKPPGAEPPSAAAKGRKAKRGSRAPPARTVGPPTPAARIPAVTLAVTSVAGSPARCSRISHTDSSSDLSDCPSEPLSDEQRLLPAASSDAESGTGSSDREPPRGAPTPSPAARGAPPGSPEPPALLAAPLAAGACPGGRSIPSGVSGGFAGPGVAEDVRGRSPPERPVPGTPKEPSLGEQSRLVPAAEEEELLREMEELRSENDYLKDELDELRAEMEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELKTVEEKRAKAEDENETLRQQMIEVEISKQALQNELERLKESSLKRRSTREMYKEKKTFNQDDSADLRCQLQFAKEEAFLMRKKMAKLGREKDELEQELQKYKSLYGDVDSPLPTGEAGGPPSTREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDMRGQQEREGPGRDHAPSIPTSPFGDSLESSTELRRHLQFVEEEAELLRRSI...
AA_position 351
Synonym: CCDC165; KIAA0802; SOGA2
NM_001378205.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens microtubule crosslinking factor 1 (MTCL1), transcript variant 2, mRNA. (7136 bp)
HARPAAPGPAVPSSGRAPAPAAPRSPNLAGKAPPSPGSLAAPGRLSRRSGGVPGAKDKPPPGAGARAAGGAKAALGSRRAARVAPAEPLSRAGKPPGAEPPSAAAKGRKAKRGSRAPPARTVGPPTPAARIPAVTLAVTSVAGSPARCSRISHTDSSSDLSDCPSEPLSDEQRLLPAASSDAESGTGSSDREPPRGAPTPSPAARGAPPGSPEPPALLAAPLAAGACPGGRSIPSGVSGGFAGPGVAEDVRGRSPPERPVPGTPKEPSLGEQSRLVPAAEEEELLREMEELRSENDYLKDELDELRAEMEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELKTVEEKRAKAEDENETLRQQMIEVEISKQALQNELERLKESSLKRRSTREMYKEKKTFNQDDSADLRCQLQFAKEEAFLMRKKMAKLGREKDELEQELQKYKSLYGDVDSPLPTGEAGGPPSTREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDMRGQQEREGPGRDHAPSIPTSPFGDSLESSTELRRHLQFVEEEAELLRRSI...
AA_position 351
Synonym: CCDC165; KIAA0802; SOGA2
NM_001378206.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens microtubule crosslinking factor 1 (MTCL1), transcript variant 3, mRNA. (6956 bp)
HARPAAPGPAVPSSGRAPAPAAPRSPNLAGKAPPSPGSLAAPGRLSRRSGGVPGAKDKPPPGAGARAAGGAKAALGSRRAARVAPAEPLSRAGKPPGAEPPSAAAKGRKAKRGSRAPPARTVGPPTPAARIPAVTLAVTSVAGSPARCSRISHTDSSSDLSDCPSEPLSDEQRLLPAASSDAESGTGSSDREPPRGAPTPSPAARGAPPGSPEPPALLAAPLAAGACPGGRSIPSGVSGGFAGPGVAEDVRGRSPPERPVPGTPKEPSLGEQSRLVPAAEEEELLREMEELRSENDYLKDELDELRAEMEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELKTVEEKRAKAEDENETLRQQMIEVEISKQALQNELERLKESSLKRRSTREMYKEKKTFNQDDSADLRCQLQFAKEEAFLMRKKMAKLGREKDELEQELQKYKSLYGDVDSPLPTGEAGGPPSTREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDMRGQQEREGPGRDHAPSIPTSPFGDSLESSTELRRHLQFVEEEAELLRRSI...
AA_position 351
Synonym: CCDC165; KIAA0802; SOGA2
NM_001378207.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens microtubule crosslinking factor 1 (MTCL1), transcript variant 6, mRNA. (7079 bp)
HARPAAPGPAVPSSGRAPAPAAPRSPNLAGKAPPSPGSLAAPGRLSRRSGGVPGAKDKPPPGAGARAAGGAKAALGSRRAARVAPAEPLSRAGKPPGAEPPSAAAKGRKAKRGSRAPPARTVGPPTPAARIPAVTLAVTSVAGSPARCSRISHTDSSSDLSDCPSEPLSDEQRLLPAASSDAESGTGSSDREPPRGAPTPSPAARGAPPGSPEPPALLAAPLAAGACPGGRSIPSGVSGGFAGPGVAEDVRGRSPPERPVPGTPKEPSLGEQSRLVPAAEEEELLREMEELRSENDYLKDELDELRAEMEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELKTVEEKRAKAEDENETLRQQMIEVEISKQALQNELERLKESSLKRRSTREMYKEKKTFNQDDSADLRCQLQFAKEEAFLMRKKMAKLGREKDELEQELQKYKSLYGDVDSPLPTGEAGGPPSTREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDMRGQQEREGPGRDHAPSIPTSPFGDSLESSTELRRHLQFVEEEAELLRRSI...
AA_position 351
Synonym: CCDC165; KIAA0802; SOGA2
NM_001395333.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens collagen type XVIII alpha 1 chain (COL18A1), transcript variant 3, mRNA. (6587 bp)
GGFFGSSLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKDVLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHHAYIVLCIENSFMTASK" sig_peptide 10..78 /gene="COL18A1" /gene_synonym="GLCC; KNO; KNO1; KS" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 76..591 /gene="COL18A1" /gene_synonym="GLCC; KNO...
AA_position 1643
Synonym: GLCC; KNO; KNO1; KS
NM_130444.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens microtubule crosslinking factor 1 (MTCL1), transcript variant 5, mRNA. (5888 bp)
db_xref="CCDS:CCDS92434.1" /db_xref="GeneID:23255" /db_xref="HGNC:HGNC:29121" /db_xref="MIM:615766" /translation="MEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELKTVEEKRAKAEDENETLRQQMIEVEISKQALQNELERLKESSLKRRSTREMYKEKKTFNQDDSADLRCQLQFAKEEAFLMRKKMAKLGREKDELEQELQKYKSLYGDVDSPLPTGEAGGPPSTREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDMRGQQEREGPGRDHAPSIPTSPFGDSLESSTELRRHLQFVEEEAELLRRSISEIEDHNRQLTHELSKFKFEPPREPGWLGEGASPGAGGGAPLQEELKSARLQISELSGKVLKLQHENHALLSNIQRCDLAAHLGLRAPSPRDSDAESDAGKKESDGEESRLPQPKREGPVGGESDSEEMFEKTSGFGSGKPSEASEPCPTELLKAREDSEYLVTLKHEAQRLERTVERLITDTDSFLHDAGLRG...
AA_position 170
Synonym: CCDC165; KIAA0802; SOGA2
NM_001395220.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens microtubule crosslinking factor 1 (MTCL1), transcript variant 4, mRNA. (6083 bp)
NP_056025.2" /db_xref="CCDS:CCDS11841.1" /db_xref="GeneID:23255" /db_xref="HGNC:HGNC:29121" /db_xref="MIM:615766" /translation="MEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELKTVEEKRAKAEDENETLRQQMIEVEISKQALQNELERLKESSLKRRSTREMYKEKKTFNQDDSADLRCQLQFAKEEAFLMRKKMAKLGREKDELEQELQKYKSLYGDVDSPLPTGEAGGPPSTREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDMRGQQEREGPGRDHAPSIPTSPFGDSLESSTELRRHLQFVEEEAELLRRSISEIEDHNRQLTHELSKFKFEPPREPGWLGEGASPGAGGGAPLQEELKSARLQISELSGKVLKLQHENHALLSNIQRCDLAAHLGLRAPSPRDSDAESDAGKKESDGEESRLPQPKREGPVGGESDSEEMFEKTSGFGSGKPSEASEPCPTELLKAREDSEYLVTLKHEAQRLERTVERLI...
AA_position 170
Synonym: CCDC165; KIAA0802; SOGA2
NM_015210.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)

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Debug Info:

Redirect URI : https://172.18.8.233:20082/hs/aa%3aKDEL
lang : en | div : | spe : hs | query_string : aa:KDEL | format : html | download : 

0.000 | 0.000 | search_start;
0.087 | 0.086 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(aa:KDEL)?source=Homo sapiens (human)?to=0&format=json
0.420 | 0.333 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=(aa:KDEL)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.421 | 0.001 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]