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2024-04-23 19:18:10, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Homo sapiens colipase (CLPS), transcript variant 1, mRNA. (538 bp)
colipase preproprotein" /codon_start=1 /product="colipase isoform 1 preproprotein" /protein_id="NP_001823.1" /db_xref="CCDS:CCDS4811.1" /db_xref="GeneID:1208" /db_xref="HGNC:HGNC:2085" /db_xref="MIM:120105" /translation="MEKILILLLVALSVAYAAPGPRGIIINLENGELCMNSAQCKSNCCQHSSALGLARCTSMASENSECSVKTLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGICHDAGRSKQ" sig_peptide 36..86 /gene="CLPS" /inference="COORDINATES: ab initio prediction:SignalP:4.0" proprotein 87..371 /gene="CLPS" /product="colipase isoform 1 proprotein" misc_feature 87..371 /gene="CLPS" /note="Colipase; Region: COLIPASE; smart00023" /db_xref="CDD...
AA_position 78
NM_001832.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens metallothionein 4 (MT4), mRNA. (270 bp)
gene="MT4" /gene_synonym="MT-4; MT-IV; MTIV" /note="metallothionein-IV" /codon_start=1 /product="metallothionein-4" /protein_id="NP_116324.2" /db_xref="CCDS:CCDS42165.1" /db_xref="GeneID:84560" /db_xref="HGNC:HGNC:18705" /db_xref="MIM:606206" /translation="MDPRECVCMSGGICMCGDNCKCTTCNCKTYWKSCCPCCPPGCAKCARGCICKGGSDKCSCCP" misc_feature 57..239 /gene="MT4" /gene_synonym="MT-4; MT-IV; MTIV" /note="Metallothionein; Region: Metallothio; pfam00131" /db_xref="CDD:395080" variation 57 /gene="MT4" /gene_synonym="MT-4; MT-IV; MTIV" /replace="a" /replace="g" /db_xref="dbSNP:768016689" variation 58 /gene="...
AA_position 35
Synonym: MT-4; MT-IV; MTIV
NM_032935.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
PREDICTED: Homo sapiens uncharacterized LOC124906621 (LOC124906621), mRNA. (918 bp)
coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:124906621" CDS 1..918 /gene="LOC124906621" /codon_start=1 /product="uncharacterized protein LOC124906621" /protein_id="XP_047300967.1" /db_xref="GeneID:124906621" /translation="MLKSWTSAAQNGTFRGHRTVADTVRLVKEAPCCSRSLMRPCPCDRKDKLQHTESSKQQCPCDGEDRLRHTESSKQQCPCDGEDRLRHTESSKQQCPCDGEDRLRHTESSKQQCPCDGEDRLRHTESSKQQCPCDGEDRLRHTESSKHPCPCDGEDRLRHAEGSRLRGSEAGGKRCVCGPRAAGNAEAGSQEGSVSPSRPCRHLQARSPNPACETAGIHCFKPIRLESFVLAAPKASHSSALSTGSVSAGKVGRPHRGTAAGPCKTQGGRASMSEGRRQMPQGITSCMLHLDGKTQKPLPTAGSAD" ORIGIN //...
AA_position 41
XM_047445011.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ADP ribosylation factor like GTPase 13A (ARL13A), transcript variant 3, mRNA. (1130 bp)
like protein 13A" /protein_id="NP_001155963.1" /db_xref="CCDS:CCDS55463.1" /db_xref="GeneID:392509" /db_xref="HGNC:HGNC:31709" /translation="MFRLLSSCCSCLRTTEETRRNVTIPIIGLNNSGKTVLVEAFQKLLPSKTDHCMKSELTTLLLDEYELSIYDLNGDLKGREAWPNYYAQAHGLVFVLDSSDIRRMQEVKIILTHLLSDKRVAGKPILILANKQDKKKALMPCDIIDYLLLKKLVKENKCPCRVEPCSAIRNLERRNHQPIVEGLRWLLAVIDTCQLPPTSSISISKNNTGSGERCSSHSFSTRTGMSKEKRQHLEQCSIEAKPLKSILQPSNQSYTH" misc_feature 183..683 /gene="ARL13A" /gene_synonym="ARL13; dJ341D10.2" /note="Arl2-like protein 1 (Arl2l1) and Arl13; Region: Arl2l1_Arl13_like; cd04161" /db_xref="CDD:133361" misc_feature 198..221 /...
AA_position 158
Synonym: ARL13; dJ341D10.2
NM_001162491.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens transmembrane protein 138 (TMEM138), transcript variant 6, mRNA. (1775 bp)
db_xref="CCDS:CCDS91484.1" /db_xref="GeneID:51524" /db_xref="HGNC:HGNC:26944" /db_xref="MIM:614459" /translation="MLQTSNYSLVLSLQFLLLSYDLFVNSFSELLQKTPVIQLVLFIIQDIAVLFNIIIIFLMFFNTFVFQAGLVNLLFHKFKGTIILTAVYFALSISLHVWVMNLRWKNSNSFIWTDGLQMLFVFQRLGKDQSKVRPLSGPTCVSFSEGLDAGFPDLSQLAWDGCDSHTRNRRDYCPCPC" misc_feature 202..204 /gene="TMEM138" /gene_synonym="HSPC196" /note="N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q9NPI0.1); glycosylation site" misc_feature 205..267 /gene="TMEM138" /gene_synonym="HSPC196" /note="propagated from UniProtKB/Swiss-Prot...
AA_position 173
Synonym: HSPC196
NM_001410999.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens spermatogenesis associated 3 (SPATA3), mRNA. (1629 bp)
spermatogenesis-associated protein 3" /protein_id="NP_620712.2" /db_xref="CCDS:CCDS2481.1" /db_xref="GeneID:130560" /db_xref="HGNC:HGNC:17884" /db_xref="MIM:619857" /translation="MKKVKKKRSEARRHRDSTSQHASSNSTSQQPSPESTPQQPSPESTPQQPSPESTPQHSSLETTSRQPAFQALPAPEIRRSSCCLLSPDANVKAAPQSRKAGPLIRAGPHSCSCATCPCSSACWRRLGLCHSRIFDVLLPRDWQMAPGRGLPNLLTFYRKSSRKPSSHRNACPPSPRNCGCGSGGSRSCLLHH" misc_feature 114..686 /gene="SPATA3" /gene_synonym="TSARG1" /note="Spermatogenesis-associated protein 3 family; Region: SPATA3; pfam15662" /db_xref="CDD:434837" misc_feature 114..308 /gene="SPATA3" /gene_synonym="TSARG1" /note...
AA_position 116
Synonym: TSARG1
NM_139073.5 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens calcium homeostasis modulator family member 5 (CALHM5), mRNA. (9787 bp)
note="protein FAM26E; family with sequence similarity 26 member E" /codon_start=1 /product="calcium homeostasis modulator protein 5" /protein_id="NP_714922.1" /db_xref="CCDS:CCDS5108.1" /db_xref="GeneID:254228" /db_xref="HGNC:HGNC:21568" /translation="MDAFQGILKFFLNQKTVIGYSFMALLTVGSERLFSVVAFKCPCSTENMTYGLVFLFAPAWVLLILGFFLNNRSWRLFTGCCVNPRKIFPRGHSCRFFYVLGQITLSSLVAPVMWLSVALLNGTFYECAMSGTRSSGLLELICKGKPKECWEELHKVSCGKTSMLPTVNEELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQLSFWKTYAQKEKEQLENTFLDYANKLSERNLKCFFENKRPDPFPMPTFAAWEAASELHSFHQSQQHYSTLHRVVDNGLQLSPEDDETTMVLVGTAHNM" misc_feature 59..811 /gene="CALHM5" /...
AA_position 41
Synonym: C6orf188; dJ493F7.3; FAM26E
NM_153711.5 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens keratin associated protein 4-16 (KRTAP4-16), mRNA. (708 bp)
product="putative keratin-associated protein 4-16" /protein_id="NP_001382996.1" /db_xref="CCDS:CCDS92304.1" /db_xref="GeneID:85354" /db_xref="HGNC:HGNC:18921" /translation="MCSSKMPCSPSASSLCAASPPNCCHPSCCQTTCCRTTSCSHSCSVSSCCRPQCCHSVCCQPTCCRPSCCQTTCCRTTCCHPSCCVSSCCRPQCCHSVCFQPTCCHPSCCISSSCCPSCCESSCCCPCCCLRPVCGRVSCHVTCYHPTCVISTCPHPLCCASPPLPLPFPSPPVPLPFFLSLALPSPPRPSPPLLSPVLIPSPSPSPSLPSLSPPLPSPPLPSPHFPSVNPKSMLQ" misc_feature 1..396 /gene="KRTAP4-16" /gene_synonym="KAP4A; KRTAP4-16P; KRTAP4P1" /note="propagated from UniProtKB/Swiss-Prot (G5E9R7.1); Region: 16 X 5 AA repeats of C-C-[GIKRQVHEML]-...
AA_position 125
Synonym: KAP4A; KRTAP4-16P; KRTAP4P1
NM_001396067.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens diphthamide biosynthesis 3 (DPH3), transcript variant 2, mRNA. (3944 bp)
protein 2; diphthamide biosynthesis protein 3" /codon_start=1 /product="diphthamide biosynthesis protein 3 isoform 2" /protein_id="NP_001040899.1" /db_xref="CCDS:CCDS43058.1" /db_xref="GeneID:285381" /db_xref="HGNC:HGNC:27717" /db_xref="MIM:608959" /translation="MAVFHDEVEIEDFQYDEDSETYFYPCPCGDNFSITKDQFVCGETVPAPSANKELVKC" misc_feature 83..>202 /gene="DPH3" /gene_synonym="DELGIP; DELGIP1; DESR1; DPH3A; KTI11; ZCSL2" /note="CSL zinc finger; Region: zf-CSL; pfam05207" /db_xref="CDD:398744" variation 68 /gene="DPH3" /gene_synonym="DELGIP; DELGIP1; DESR1; DPH3A; KTI11; ZCSL2" /replace="a" /replace="g...
AA_position 26
Synonym: DELGIP; DELGIP1; DESR1; DPH3A; KTI11; ZCSL2
NM_001047434.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens metallothionein 3 (MT3), mRNA. (406 bp)
GIFB; GRIF; ZnMT3" /note="metallothionein 3 (growth inhibitory factor (neurotrophic)); metallothionein-III" /codon_start=1 /product="metallothionein-3" /protein_id="NP_005945.1" /db_xref="CCDS:CCDS10762.1" /db_xref="GeneID:4504" /db_xref="HGNC:HGNC:7408" /db_xref="MIM:139255" /translation="MDPETCPCPSGGSCTCADSCKCEGCKCTSCKKSCCSCCPAECEKCAKDCVCKGGEAAEAEAEKCSCCQ" misc_feature 64..267 /gene="MT3" /gene_synonym="GIF; GIFB; GRIF; ZnMT3" /note="Metallothionein; Region: Metallothio; pfam00131" /db_xref="CDD:395080" misc_feature 64..153 /gene="MT3" /gene_synonym="GIF; GIFB; GRIF; ZnMT3" /note="propagated...
AA_position 6
Synonym: GIF; GIFB; GRIF; ZnMT3
NM_005954.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens colipase (CLPS), transcript variant 3, mRNA. (415 bp)
pancreatic colipase preproprotein; colipase, pancreatic" /codon_start=1 /product="colipase isoform 3 preproprotein" /protein_id="NP_001239527.1" /db_xref="CCDS:CCDS75438.1" /db_xref="GeneID:1208" /db_xref="HGNC:HGNC:2085" /db_xref="MIM:120105" /translation="MEKILILLLVALSVAYAAPGPRGIIINLTLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGICHDAGRSKQ" sig_peptide 36..86 /gene="CLPS" /inference="COORDINATES: ab initio prediction:SignalP:4.0" proprotein 87..248 /gene="CLPS" /product="colipase isoform 3 proprotein" misc_feature 87..248 /gene="CLPS" /note="Colipase; a stoichiometric cofactor for pancreatic lipase,...
AA_position 37
NM_001252598.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 3, mRNA. (6773 bp)
CDS 32..265 /gene="C16orf87" /note="isoform 3 is encoded by transcript variant 3; UPF0547 protein C16orf87" /codon_start=1 /product="UPF0547 protein C16orf87 isoform 3" /protein_id="NP_001335590.1" /db_xref="GeneID:388272" /db_xref="HGNC:HGNC:33754" /translation="MSATRAKKVKMATKSCPECDQQVPVACKSCPCGYIFISRKLLNAKHSEKSPPSTGSQKICYQYCLSQEAPTSYLLPK" misc_feature 71..145 /gene="C16orf87" /note="Uncharacterized protein family UPF0547; Region: UPF0547; pfam10571" /db_xref="CDD:402278" variation 32 /gene="C16orf87" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1318211547" variation 33 /gene="...
AA_position 30
NM_001348661.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens diphthamide biosynthesis 3 (DPH3), transcript variant 1, mRNA. (4019 bp)
containing protein 2; diphthamide biosynthesis protein 3" /codon_start=1 /product="diphthamide biosynthesis protein 3 isoform 1" /protein_id="NP_996662.1" /db_xref="CCDS:CCDS2629.1" /db_xref="GeneID:285381" /db_xref="HGNC:HGNC:27717" /db_xref="MIM:608959" /translation="MAVFHDEVEIEDFQYDEDSETYFYPCPCGDNFSITKEDLENGEDVATCPSCSLIIKVIYDKDQFVCGETVPAPSANKELVKC" misc_feature 83..247 /gene="DPH3" /gene_synonym="DELGIP; DELGIP1; DESR1; DPH3A; KTI11; ZCSL2" /note="CSL zinc finger; Region: zf-CSL; pfam05207" /db_xref="CDD:398744" variation 68 /gene="DPH3" /gene_synonym="DELGIP; DELGIP1; DESR1; DPH3A; KTI11;...
AA_position 26
Synonym: DELGIP; DELGIP1; DESR1; DPH3A; KTI11; ZCSL2
NM_206831.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 5 (SCYGR5), mRNA. (258 bp)
KRTAP28-5" /note="keratin associated protein 28-5" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 5" /protein_id="NP_001382335.1" /db_xref="CCDS:CCDS92956.1" /db_xref="GeneID:112441437" /db_xref="HGNC:HGNC:34224" /translation="MGCCGCGGCGGCGGGCGGGCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCCSCGCGCGKGCCQQKGCCQKQCCC" misc_feature 10..207 /gene="SCYGR5" /gene_synonym="KRTAP28-5" /note="propagated from UniProtKB/Swiss-Prot (A0A286YF46.1); Region: 10 X 2 AA repeats of CG. /evidence=ECO:0000305" exon 1..258 /gene="SCYGR5" /gene_synonym="KRTAP28-5" /inference="alignment:...
AA_position 38
Synonym: KRTAP28-5
NM_001395406.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 1 (SCYGR1), mRNA. (267 bp)
KRTAP28-1" /note="keratin associated protein 28-1" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 1" /protein_id="NP_001382331.1" /db_xref="CCDS:CCDS92952.1" /db_xref="GeneID:112441428" /db_xref="HGNC:HGNC:34218" /translation="MGCCGCGGCGGCGGCGGGCGGGCGRCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCSSCGYSCGKGCCQQKCCCQKQCCC" misc_feature 10..216 /gene="SCYGR1" /gene_synonym="KRTAP28-1" /note="propagated from UniProtKB/Swiss-Prot (A0A286YEY9.1); Region: 10 X 2 AA repeats of CG" exon 1..267 /gene="SCYGR1" /gene_synonym="KRTAP28-1" /inference="alignment:Splign:2.1.0"...
AA_position 41
Synonym: KRTAP28-1
NM_001395402.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ring finger protein 7 (RNF7), transcript variant 3, mRNA. (2662 bp)
gene protein" /codon_start=1 /product="RING-box protein 2 isoform 3" /protein_id="NP_899060.1" /db_xref="CCDS:CCDS43158.1" /db_xref="GeneID:9616" /db_xref="HGNC:HGNC:10070" /db_xref="MIM:603863" /translation="MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQMPVLDVKLKTNKRTVLWSGENVIIPSTTAACPCG" misc_feature 126..>209 /gene="RNF7" /gene_synonym="CKBBP1; rbx2; ROC2; SAG" /note="RING finger (Really Interesting New Gene) domain and U-box domain superfamily; Region: RING_Ubox; cl17238" /db_xref="CDD:450175" variation 45 /gene="RNF7" /gene_synonym="CKBBP1; rbx2; ROC2; SAG" /replace="a" /replace...
AA_position 87
Synonym: CKBBP1; rbx2; ROC2; SAG
NM_183237.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens harakiri, BCL2 interacting protein (HRK), transcript variant 1, mRNA. (5789 bp)
domain-containing protein 3; harakiri, BCL2 interacting protein (contains only BH3 domain)" /codon_start=1 /product="activator of apoptosis harakiri" /protein_id="NP_003797.1" /db_xref="CCDS:CCDS9181.1" /db_xref="GeneID:8739" /db_xref="HGNC:HGNC:5185" /db_xref="MIM:603447" /translation="MCPCPLHRGRGPPAVCACSAGRLGLRSSAAQLTAARLKALGDELHQRTMWRRRARSRRAPAPGALPTYWPWLCAAAQVAALAAWLLGRRNL" misc_feature 135..407 /gene="HRK" /gene_synonym="DP5; HARAKIRI" /note="Activator of apoptosis harakiri; Region: Harakiri; pfam15196" /db_xref="CDD:259330" misc_feature 231..275 /gene="HRK" /gene_synonym="DP5; HARAKIRI...
AA_position 2
Synonym: DP5; HARAKIRI
NM_003806.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 2, mRNA. (6662 bp)
note="isoform 2 is encoded by transcript variant 2; UPF0547 protein C16orf87" /codon_start=1 /product="UPF0547 protein C16orf87 isoform 2" /protein_id="NP_001335589.1" /db_xref="CCDS:CCDS86522.1" /db_xref="GeneID:388272" /db_xref="HGNC:HGNC:33754" /translation="MSATRAKKVKMATKSCPECDQQVPVACKSCPCGYIFISRKLLNAKHSEKSPPSTEKQEKEIDIYANLSDEKAFVFSVALAEINRKIINQRLIL" misc_feature 71..145 /gene="C16orf87" /note="Uncharacterized protein family UPF0547; Region: UPF0547; pfam10571" /db_xref="CDD:402278" variation 32 /gene="C16orf87" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1318211547" variation...
AA_position 30
NM_001348660.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 7 (SCYGR7), mRNA. (291 bp)
note="keratin associated protein 28-7" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 7" /protein_id="NP_001382337.1" /db_xref="CCDS:CCDS92959.1" /db_xref="GeneID:112441438" /db_xref="HGNC:HGNC:34226" /translation="MGCCGCGSCGGCGGGCGGCGGGCGGGCGGGCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCGSCGCGCGKGCCQQKGCCQKQCCC" misc_feature 10..240 /gene="SCYGR7" /gene_synonym="KRTAP28-7" /note="propagated from UniProtKB/Swiss-Prot (A0A286YF01.1); Region: 14 X 2 AA repeats of CG. /evidence=ECO:0000305" exon 1..291 /gene="SCYGR7" /gene_synonym="KRTAP28-7" /inference="alignment:...
AA_position 49
Synonym: KRTAP28-7
NM_001395408.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens phospholipid phosphatase 4 (PLPP4), transcript variant 4, mRNA. (3178 bp)
diacylglycerol pyrophosphate phosphatase-like 2" /codon_start=1 /product="phospholipid phosphatase 4 isoform d" /protein_id="NP_001305097.1" /db_xref="GeneID:196051" /db_xref="HGNC:HGNC:23531" /translation="MRELAIEIGVRALLFGVFVFTEFLDPFQRVIQPEEIWLYKNPLVQSDNIPTRLMFLPFRALASRRSTWRASCTASPRVGGERAGGSVLPSCPCTAP" misc_feature 89..151 /gene="PLPP4" /gene_synonym="DPPL2; PPAPDC1; PPAPDC1A" /note="propagated from UniProtKB/Swiss-Prot (Q5VZY2.2); transmembrane region" variation 80 /gene="PLPP4" /gene_synonym="DPPL2; PPAPDC1; PPAPDC1A" /replace="a" /replace="t" /db_xref="dbSNP:1285821352" variation 81 /gene...
AA_position 91
Synonym: DPPL2; PPAPDC1; PPAPDC1A
NM_001318168.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens colipase (CLPS), transcript variant 2, mRNA. (636 bp)
colipase preproprotein; colipase, pancreatic" /codon_start=1 /product="colipase isoform 2" /protein_id="NP_001239526.1" /db_xref="CCDS:CCDS75437.1" /db_xref="GeneID:1208" /db_xref="HGNC:HGNC:2085" /db_xref="MIM:120105" /translation="MILLPQPPKKLGLQENGELCMNSAQCKSNCCQHSSALGLARCTSMASENSECSVKTLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGICHDAGRSKQ" misc_feature 218..469 /gene="CLPS" /note="Colipase; Region: COLIPASE; smart00023" /db_xref="CDD:128339" variation 176 /gene="CLPS" /replace="a" /replace="g" /db_xref="dbSNP:1196329361" variation 177 /gene="CLPS" /replace="c" /replace="t" /db_xref="dbSNP:1768380420"...
AA_position 64
NM_001252597.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 3 (SCYGR3), mRNA. (303 bp)
note="keratin associated protein 28-3" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 3" /protein_id="NP_001382333.1" /db_xref="CCDS:CCDS92954.1" /db_xref="GeneID:112441429" /db_xref="HGNC:HGNC:34222" /translation="MGCCGCGSCGGCGGGCGGCGGGCGGGCGGGCGGVCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCRSCGCGCRKGCCQQKCCCQKQCCC" misc_feature 10..246 /gene="SCYGR3" /gene_synonym="KRTAP28-3" /note="propagated from UniProtKB/Swiss-Prot (A0A286YF60.1); Region: 13 X 2 AA repeats of CG. /evidence=ECO:0000305" exon 1..303 /gene="SCYGR3" /gene_synonym="KRTAP28-3" /inference="alignment...
AA_position 53
Synonym: KRTAP28-3
NM_001395404.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens WD repeat domain 72 (WDR72), transcript variant 2, mRNA. (4248 bp)
codon_start=1 /product="WD repeat-containing protein 72 isoform b" /protein_id="NP_001264105.1" /db_xref="CCDS:CCDS73730.1" /db_xref="GeneID:256764" /db_xref="HGNC:HGNC:26790" /db_xref="MIM:613214" /translation="MAGVPPPAWLPPCSLISDCCASNQRDSVGVGPSEPAPVSPVKHDSNSNSANFQDVEDMPDRCALEESESPGEPRHHSWIAKVCPCKVS" variation 24..25 /gene="WDR72" /gene_synonym="AI2A3" /replace="" /replace="at" /db_xref="dbSNP:1893095803" variation 24 /gene="WDR72" /gene_synonym="AI2A3" /replace="a" /replace="g" /db_xref="dbSNP:1394115002" variation 26 /gene="WDR72" /gene_synonym="AI2A3" /replace="c" /replace="g" /db_xref="...
AA_position 83
Synonym: AI2A3
NM_001277176.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 6 (SCYGR6), mRNA. (318 bp)
note="keratin associated protein 28-6" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 6" /protein_id="NP_001382336.1" /db_xref="CCDS:CCDS92958.1" /db_xref="GeneID:112441431" /db_xref="HGNC:HGNC:34225" /translation="MGCCGCGGCGGGCGGCGGGCSGGCGGGCGGGCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCHSCGCGCGCGKGCCQQKGCCQQKGCCKKQCCC" misc_feature 10..249 /gene="SCYGR6" /gene_synonym="KRTAP28-6" /note="propagated from UniProtKB/Swiss-Prot (A0A286YF77.1); Region: 13 X 2 AA repeats of CG. /evidence=ECO:0000305" exon 1..318 /gene="SCYGR6" /gene_synonym="KRTAP28-6" /inference="...
AA_position 50
Synonym: KRTAP28-6
NM_001395407.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 4 (SCYGR4), mRNA. (318 bp)
keratin associated protein 28-4" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 4" /protein_id="NP_001382334.1" /db_xref="CCDS:CCDS92955.1" /db_xref="GeneID:112441430" /db_xref="HGNC:HGNC:34223" /translation="MGCCGCGSCGGCGGRCGGGCGGGCSGGCGGGCGGGCGGGCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCGSCGCGYGKGCCQQKCCCQKQCCC" misc_feature 10..261 /gene="SCYGR4" /gene_synonym="KRTAP28-4" /note="propagated from UniProtKB/Swiss-Prot (A0A286YEV6.1); Region: 14 X 2 AA repeats of CG. /evidence=ECO:0000305" exon 1..318 /gene="SCYGR4" /gene_synonym="KRTAP28-4" /inference="alignment:...
AA_position 58
Synonym: KRTAP28-4
NM_001395405.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens C-X-C motif chemokine ligand 12 (CXCL12), transcript variant 1, mRNA. (1928 bp)
factor 1; chemokine (C-X-C motif) ligand 12" /codon_start=1 /product="stromal cell-derived factor 1 isoform alpha precursor" /protein_id="NP_954637.1" /db_xref="CCDS:CCDS7207.1" /db_xref="GeneID:6387" /db_xref="HGNC:HGNC:10672" /db_xref="MIM:600835" /translation="MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKALNK" sig_peptide 93..155 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /inference="COORDINATES: ab initio prediction:SignalP:4.0" mat_peptide 156..359 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /product...
AA_position 30
Synonym: IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1
NM_199168.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 10 (gene/pseudogene) (SCYGR10), transcript variant 1, mRNA. (321 bp)
keratin associated protein 28 family pseudogene 2" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 10" /protein_id="NP_001383012.1" /db_xref="GeneID:112441436" /db_xref="HGNC:HGNC:34221" /translation="MGCCGCGGCGGRCSGGCGGGCGGGCGGGCGGGCGGGCGGDCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCRSCGCSCGKSCCQQKCCCQKQCCC" exon 1..321 /gene="SCYGR10" /gene_synonym="KRTAP28-10; KRTAP28p2" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 321) AUTHORS Wu DD, Irwin DM and Zhang YP. TITLE Molecular evolution of the keratin associated protein gene family in mammals...
AA_position 59
Synonym: KRTAP28-10; KRTAP28p2
NM_001396083.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 8 (SCYGR8), mRNA. (327 bp)
keratin associated protein 28-8" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 8" /protein_id="NP_001382338.1" /db_xref="CCDS:CCDS92960.1" /db_xref="GeneID:112441432" /db_xref="HGNC:HGNC:34227" /translation="MGCCGCGGCGGGCGGCSGGCGGGCGGGCGGGGCGGGCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCSSCGCGYGKGCCQQKGCCQQKCCCQKQCCC" misc_feature 10..252 /gene="SCYGR8" /gene_synonym="KRTAP28-8" /note="propagated from UniProtKB/Swiss-Prot (A0A286YFG1.1); Region: 12 X 2 AA repeats of CG. /evidence=ECO:0000305" exon 1..327 /gene="SCYGR8" /gene_synonym="KRTAP28-8" /inference="...
AA_position 55
Synonym: KRTAP28-8
NM_001395409.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
PREDICTED: Homo sapiens uncharacterized LOC124904103 (LOC124904103), mRNA. (4439 bp)
variation 3113 /gene="LOC124904103" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:7222517" CDS 3114..4439 /gene="LOC124904103" /codon_start=1 /product="uncharacterized protein LOC124904103" /protein_id="XP_047293220.1" /db_xref="GeneID:124904103" /translation="MSPAGGWVSMSSDLRRGRCHRQQVWCPCPQISEGDDVTGRWFGVHVLRSQKGTMSPAAGWVSMSSDLRRRRCHRQVVGYPCPQISEGDDVTGRWLGVHVLRSQKETMSPAGGLVSISSDLRRRRCHRQVAGYQCPQISEGDDVTGRWLGVHVLRSQKETMSPAGGLVSMSSDLRRRRCHRQVVGCPCPQISEEDDVTGRWLGIHVLRSQKGTMSLAGGLVFMSSDLRRRQCHQQVVWCPCPQISEGDNVTGRWLDIHVLRSQKGTISPAGGWVFMSSDLRRRRCHRQVVWCPCPQISEGDDVTGRWLGIHVLRSQKGTMSLAGGLVFMSS...
AA_position 26
XM_047437264.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens C-X-C motif chemokine ligand 12 (CXCL12), transcript variant 2, mRNA. (3537 bp)
factor 1; chemokine (C-X-C motif) ligand 12" /codon_start=1 /product="stromal cell-derived factor 1 isoform beta precursor" /protein_id="NP_000600.1" /db_xref="CCDS:CCDS44373.1" /db_xref="GeneID:6387" /db_xref="HGNC:HGNC:10672" /db_xref="MIM:600835" /translation="MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKALNKRFKM" sig_peptide 93..155 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /inference="COORDINATES: ab initio prediction:SignalP:4.0" mat_peptide 156..371 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /...
AA_position 30
Synonym: IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1
NM_000609.7 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens colipase like 2 (CLPSL2), transcript variant 2, mRNA. (426 bp)
colipase-like protein 2" /codon_start=1 /product="colipase-like protein 2 isoform b precursor" /protein_id="NP_997292.2" /db_xref="CCDS:CCDS4810.2" /db_xref="GeneID:389383" /db_xref="HGNC:HGNC:21250" /translation="MAAALALVAGVLSGAVLPLWSALPQYKKKITDRCFHHSECYSGCCLMDLDSGGAFCAPRARITMICLPQTKGATNIICPCRMGLTCISKDLMCSRRCHMI" sig_peptide 22..84 /gene="CLPSL2" /gene_synonym="AAAL3045; C6orf126; dJ510O8.5; UNQ3045" /note="/evidence=ECO:0000269|PubMed:15340161; propagated from UniProtKB/Swiss-Prot (Q6UWE3.3)" mat_peptide 85..321 /gene="CLPSL2" /gene_synonym="AAAL3045; C6orf126; dJ510O8.5; UNQ3045" /product="...
AA_position 78
Synonym: AAAL3045; C6orf126; dJ510O8.5; UNQ3045
NM_207409.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens shisa family member 5 (SHISA5), transcript variant 7, mRNA. (1963 bp)
shisa homolog 5" /codon_start=1 /product="protein shisa-5 isoform e" /protein_id="NP_001259012.1" /db_xref="GeneID:51246" /db_xref="HGNC:HGNC:30376" /db_xref="MIM:607290" /translation="MGFGATLAVGLTIFVLSVVTIIICFTCSCCCLYKTCRRPRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGECPCQL" misc_feature <145..462 /gene="SHISA5" /gene_synonym="SCOTIN" /note="Wnt and FGF inhibitory regulator; Region: Shisa; pfam13908" /db_xref="CDD:433573" exon 150..265 /gene="SHISA5" /gene_synonym="SCOTIN" /inference="alignment:Splign:2.1.0" variation 153 /gene="SHISA5" /gene_synonym="SCOTIN" /...
AA_position 114
Synonym: SCOTIN
NM_001272083.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens C-X-C motif chemokine ligand 17 (CXCL17), transcript variant 1, mRNA. (1080 bp)
ligand 17; 6-Cys CXCL17" /codon_start=1 /product="C-X-C motif chemokine 17 precursor" /protein_id="NP_940879.1" /db_xref="CCDS:CCDS12608.1" /db_xref="GeneID:284340" /db_xref="HGNC:HGNC:19232" /db_xref="MIM:611387" /translation="MKVLISSPLMLMSMVSSSLNPGVARGHRDRGQASRRWLQEGGQECECKDWFLRAPRRKFMTVSGLPKKQCPCDHFKGNVKKTRHQRHHRKPNKHSRACQQFLKQCQLRSFALPL" sig_peptide 115..177 /gene="CXCL17" /gene_synonym="Dcip1; DMC; UNQ473; VCC-1; VCC1" /note="/evidence=ECO:0000269|PubMed:15340161; propagated from UniProtKB/Swiss-Prot (Q6UXB2.1)" mat_peptide 178..471 /gene="CXCL17" /gene_synonym="Dcip1; DMC; UNQ473; VCC...
AA_position 75
Synonym: Dcip1; DMC; UNQ473; VCC-1; VCC1
NM_198477.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens small cysteine and glycine repeat containing 2 (SCYGR2), mRNA. (363 bp)
protein 28-2" /codon_start=1 /product="small cysteine and glycine repeat-containing protein 2" /protein_id="NP_001382332.1" /db_xref="CCDS:CCDS92953.1" /db_xref="GeneID:112441435" /db_xref="HGNC:HGNC:34220" /translation="MGCCGCGGCGGCGGRCGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGGCGGSCGSCTTCRCYRVGCCSSCCPCCRGCCGGCCSTPVICCCRRTCHSCGCGCGKGCCQQKCCCQKQCCC" misc_feature 10..312 /gene="SCYGR2" /gene_synonym="KRTAP28-2" /note="propagated from UniProtKB/Swiss-Prot (A0A286YFB4.1); Region: 19 X 2 AA repeats of CG" exon 1..363 /gene="SCYGR2" /gene_synonym="KRTAP28-2" /inference="alignment:Splign:2.1.0" variation 4 /...
AA_position 73
Synonym: KRTAP28-2
NM_001395403.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens C-X-C motif chemokine ligand 12 (CXCL12), transcript variant 5, mRNA. (3127 bp)
factor 1; chemokine (C-X-C motif) ligand 12" /codon_start=1 /product="stromal cell-derived factor 1 isoform 5 precursor" /protein_id="NP_001264919.1" /db_xref="CCDS:CCDS60518.1" /db_xref="GeneID:6387" /db_xref="HGNC:HGNC:10672" /db_xref="MIM:600835" /translation="MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESHYCTCLIRVSFHGATPLTQGSWVLYSLSCAGGETGLREPGPMVSPRVESHQEGRLGVPGPVNLGKA" sig_peptide 93..155 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /inference="COORDINATES: ab initio prediction:SignalP:4.0" mat_peptide 156..401 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF;...
AA_position 30
Synonym: IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1
NM_001277990.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens prokineticin 1 (PROK1), mRNA. (1393 bp)
endothelial growth factor" /codon_start=1 /product="prokineticin-1 precursor" /protein_id="NP_115790.1" /db_xref="CCDS:CCDS825.1" /db_xref="GeneID:84432" /db_xref="HGNC:HGNC:18454" /db_xref="MIM:606233" /translation="MRGATRVSIMLLLVTVSDCAVITGACERDVQCGAGTCCAISLWLRGLRMCTPLGREGEECHPGSHKVPFFRKRKHHTCPCLPNLLCSRFPDGRYRCSMDLKNINF" misc_feature 69..359 /gene="PROK1" /gene_synonym="EGVEGF; PK1; PRK1" /note="Region: Prokineticin; pfam06607" /db_xref="CDD:148298" sig_peptide 69..125 /gene="PROK1" /gene_synonym="EGVEGF; PK1; PRK1" /inference="COORDINATES: ab initio prediction:SignalP:4.0" mat_peptide...
AA_position 78
Synonym: EGVEGF; PK1; PRK1
NM_032414.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens prokineticin 2 (PROK2), transcript variant 2, mRNA. (1492 bp)
Bv8 homolog" /codon_start=1 /product="prokineticin-2 isoform b precursor" /protein_id="NP_068754.1" /db_xref="CCDS:CCDS2916.1" /db_xref="GeneID:60675" /db_xref="HGNC:HGNC:18455" /db_xref="MIM:607002" /translation="MRSLCCAPPPLLLTPRAGDAAVITGACDKDSQCGGGMCCAVSIWVKSIRICTPMGKLGDSCHPLTRKVPFFGRRMHHTCPCLPGLACLRTSFNRFICLAQK" sig_peptide 97..177 /gene="PROK2" /gene_synonym="BV8; HH4; KAL4; MIT1; PK2" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 163..411 /gene="PROK2" /gene_synonym="BV8; HH4; KAL4; MIT1; PK2" /note="Region: Prokineticin; pfam06607" /db_xref="CDD:148298" mat_...
AA_position 86
Synonym: BV8; HH4; KAL4; MIT1; PK2
NM_021935.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens zinc finger protein 787 (ZNF787), transcript variant 2, mRNA. (1702 bp)
codon_start=1 /product="zinc finger protein 787 isoform 2" /protein_id="NP_001338611.1" /db_xref="CCDS:CCDS86810.1" /db_xref="GeneID:126208" /db_xref="HGNC:HGNC:26998" /translation="MELREEAWSPGPLDSEDQQMASHENPGEQPEAFPADPAASHLTLASFASGWEETPLPCFPLLGPWDHPTLASPPALGLALLAVEGGLVLWLQVSFLLDDLGDPWGPPSLPDFLCPCPSSLGSTPVC" variation 135 /gene="ZNF787" /gene_synonym="TIP20" /replace="a" /replace="g" /db_xref="dbSNP:754120179" variation 144 /gene="ZNF787" /gene_synonym="TIP20" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:766653790" variation 145 /gene="ZNF787" /gene_synonym="TIP20" /replace="a" /...
AA_position 114
Synonym: TIP20
NM_001351682.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens cornichon family AMPA receptor auxiliary protein 4 (CNIH4), transcript variant 5, mRNA. (822 bp)
isoform 5" /protein_id="NP_001264129.1" /db_xref="CCDS:CCDS60429.1" /db_xref="GeneID:29097" /db_xref="HGNC:HGNC:25013" /db_xref="MIM:617483" /translation="MEAVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATWNIYRYIMVPSGNMGVFDPTEIHNRGQLKSHMKEAMIKLGFHLLCFFMYLYSGSNCPC" misc_feature 53..436 /gene="CNIH4" /gene_synonym="CNIH-4; CNIH2; HSPC163" /note="Cornichon protein; Region: Cornichon; pfam03311" /db_xref="CDD:427237" misc_feature 59..121 /gene="CNIH4" /gene_synonym="CNIH-4; CNIH2; HSPC163" /note="propagated from UniProtKB/Swiss-Prot (Q9P003.1); transmembrane region"...
AA_position 135
Synonym: CNIH-4; CNIH2; HSPC163
NM_001277200.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens C-X-C motif chemokine ligand 12 (CXCL12), transcript variant 3, mRNA. (524 bp)
factor 1; chemokine (C-X-C motif) ligand 12" /codon_start=1 /product="stromal cell-derived factor 1 isoform gamma precursor" /protein_id="NP_001029058.1" /db_xref="CCDS:CCDS31186.1" /db_xref="GeneID:6387" /db_xref="HGNC:HGNC:10672" /db_xref="MIM:600835" /translation="MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKALNKGRREEKVGKKEKIGKKKRQKKRKAAQKRKN" sig_peptide 93..155 /gene="CXCL12" /gene_synonym="IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1" /inference="COORDINATES: ab initio prediction:SignalP:4.0" mat_peptide 156..449 /gene="CXCL12" /gene_synonym="IRH; PBSF;...
AA_position 30
Synonym: IRH; PBSF; SCYB12; SDF1; TLSF; TPAR1
NM_001033886.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens von Willebrand factor C domain containing 2 like (VWC2L), transcript variant 2, mRNA. (4508 bp)
von Willebrand factor C domain-containing protein 2-like isoform 2 precursor" /protein_id="NP_001332858.1" /db_xref="CCDS:CCDS86917.1" /db_xref="GeneID:402117" /db_xref="HGNC:HGNC:37203" /db_xref="MIM:619794" /translation="MALHIHEACILLLVIPGLVTSAAISHEDYPADEGDQISSNDNLIFDDYRGKGCVDDSGFVYKLGERFFPGHSNCPCVCALDGPVCDQPECPKIHPKCTKVEHNGCCPECKEVKNFCEYHGKNYKILEEFKVQTALQERR" sig_peptide 814..876 /gene="VWC2L" /inference="COORDINATES: ab initio prediction:SignalP:4.0" variation 818 /gene="VWC2L" /replace="a" /replace="c" /db_xref="dbSNP:1702319168" variation 819 /gene="VWC2L" /replace="c" /replace="t" /db_...
AA_position 74
NM_001345929.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens colipase like 1 (CLPSL1), transcript variant 1, mRNA. (598 bp)
like protein 1" /codon_start=1 /product="colipase-like protein 1 isoform 1 precursor" /protein_id="NP_001010886.1" /db_xref="CCDS:CCDS43456.1" /db_xref="GeneID:340204" /db_xref="HGNC:HGNC:21251" /translation="MMLPQWLLLLFLLFFFLFLLTRGSLSPTKYNLLELKESCIRNQDCETGCCQRAPDNCESHCAEKGSEGSLCQTQVFFGQYRACPCLRNLTCIYSKNEKWLSIAYGRCQKIGRQKLAKKMFF" sig_peptide 93..161 /gene="CLPSL1" /gene_synonym="C6orf127; dJ510O8.6; ESP32" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 159..422 /gene="CLPSL1" /gene_synonym="C6orf127; dJ510O8.6; ESP32" /note="Colipase; a stoichiometric cofactor for...
AA_position 83
Synonym: C6orf127; dJ510O8.6; ESP32
NM_001010886.5 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens natural killer cell granule protein 7 (NKG7), transcript variant 2, mRNA. (755 bp)
sequence" /codon_start=1 /product="protein NKG7 isoform 2" /protein_id="NP_001350622.1" /db_xref="CCDS:CCDS86796.1" /db_xref="GeneID:4818" /db_xref="HGNC:HGNC:7830" /db_xref="MIM:606008" /translation="MELCRSLALLGGSLGLMFCLIALSTDFWFEAVGPTHSAHSGLWPTGHGDIISGHGPLVSTTAAFAAGKDSGLDWGIASQRIPAEELSHLSCPCPQPSPWWWPWRCTPASGGTSLHTPRSRPSSPGPSTWAGSQLSSCSVQVP" variation 121 /gene="NKG7" /gene_synonym="GIG1; GMP-17; p15-TIA-1" /replace="g" /replace="t" /db_xref="dbSNP:767254406" variation 123 /gene="NKG7" /gene_synonym="GIG1; GMP-17; p15-TIA-1" /replace="c" /replace="g" /db_xref="dbSNP:1052040361" variation...
AA_position 91
Synonym: GIG1; GMP-17; p15-TIA-1
NM_001363693.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens solute carrier family 22 member 31 (SLC22A31), transcript variant 4, mRNA. (2153 bp)
LLFWGFPALFPESPCWLLATGQVARARKILWRFAEASGVGPGDSSLEENSLATELTMLSARSPQPRYHSPLGLLRTRVTWRNGLILGFSSLVGGGIRASFRRSLAPQVPTFYLPYFLEAGLEAAALVFLLLTADCCGRRPVLLLGTMVTGLASLLLLAGAQCELGAPQAIQEPLCLGRRSATPGGHSADRGAAWGGSPRPAAVCFPLILVEGPKGSFVTGLKSARLDCAVPLCPGAPGLPGCVRTQQPLRGRGLPHGDQGGRAGPGAGGRVPGPGSRPPGHPARPAGLLPATSRLRLPCCPCPAVCPAAA" misc_feature 1278 /gene="SLC22A31" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:452895" misc_feature 1062 /gene="SLC22A31" /note="cation transport protein; Region: 2A0119; TIGR00898" /db_xref="CDD:273328" variation 718 /gene="SLC22A31" /replace="a" /replace="...
AA_position 338
NM_001384765.1 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ring finger protein 24 (RNF24), transcript variant 1, mRNA. (7620 bp)
codon_start=1 /product="RING finger protein 24 isoform 1" /protein_id="NP_009150.1" /db_xref="CCDS:CCDS13074.1" /db_xref="GeneID:11237" /db_xref="HGNC:HGNC:13779" /db_xref="MIM:612489" /translation="MSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKEFYAYKQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQLHSKQDRGPPQGPLPGAENIV" misc_feature 491..553 /gene="RNF24" /gene_synonym="G1L" /note="propagated from UniProtKB/Swiss-Prot (Q9Y225.1); transmembrane region" misc_feature 647..805 /gene="RNF24" /gene_synonym="G1L" /note="RING finger, H2 subclass, found in RING finger protein...
AA_position 94
Synonym: G1L
NM_007219.5 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ring finger protein 24 (RNF24), transcript variant 4, mRNA. (7564 bp)
codon_start=1 /product="RING finger protein 24 isoform 1" /protein_id="NP_001308678.1" /db_xref="CCDS:CCDS13074.1" /db_xref="GeneID:11237" /db_xref="HGNC:HGNC:13779" /db_xref="MIM:612489" /translation="MSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKEFYAYKQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQLHSKQDRGPPQGPLPGAENIV" misc_feature 435..497 /gene="RNF24" /gene_synonym="G1L" /note="propagated from UniProtKB/Swiss-Prot (Q9Y225.1); transmembrane region" misc_feature 591..749 /gene="RNF24" /gene_synonym="G1L" /note="RING finger, H2 subclass, found in RING finger...
AA_position 94
Synonym: G1L
NM_001321749.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens ring finger protein 24 (RNF24), transcript variant 2, mRNA. (7328 bp)
codon_start=1 /product="RING finger protein 24 isoform 1" /protein_id="NP_001127809.1" /db_xref="CCDS:CCDS13074.1" /db_xref="GeneID:11237" /db_xref="HGNC:HGNC:13779" /db_xref="MIM:612489" /translation="MSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKEFYAYKQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQLHSKQDRGPPQGPLPGAENIV" misc_feature 199..261 /gene="RNF24" /gene_synonym="G1L" /note="propagated from UniProtKB/Swiss-Prot (Q9Y225.1); transmembrane region" misc_feature 355..513 /gene="RNF24" /gene_synonym="G1L" /note="RING finger, H2 subclass, found in RING finger...
AA_position 94
Synonym: G1L
NM_001134337.3 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens prokineticin 2 (PROK2), transcript variant 1, mRNA. (1555 bp)
start=1 /product="prokineticin-2 isoform a precursor" /protein_id="NP_001119600.1" /db_xref="CCDS:CCDS46868.1" /db_xref="GeneID:60675" /db_xref="HGNC:HGNC:18455" /db_xref="MIM:607002" /translation="MRSLCCAPPPLLLTPRAGDAAVITGACDKDSQCGGGMCCAVSIWVKSIRICTPMGKLGDSCHPLTRKNNFGNGRQERRKRKRSKRKKEVPFFGRRMHHTCPCLPGLACLRTSFNRFICLAQK" sig_peptide 97..177 /gene="PROK2" /gene_synonym="BV8; HH4; KAL4; MIT1; PK2" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 163..474 /gene="PROK2" /gene_synonym="BV8; HH4; KAL4; MIT1; PK2" /note="Region: Prokineticin; pfam06607" /db_xref="CDD:148298" mat...
AA_position 107
Synonym: BV8; HH4; KAL4; MIT1; PK2
NM_001126128.2 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens granulysin (GNLY), transcript variant 3, mRNA. (1021 bp)
lymphocyte-activation gene 2; lymphokine LAG-2; T-cell activation protein 519" /codon_start=1 /product="granulysin isoform 3" /protein_id="NP_036615.2" /db_xref="CCDS:CCDS46354.1" /db_xref="GeneID:10578" /db_xref="HGNC:HGNC:4414" /db_xref="MIM:188855" /translation="MEGLVFSRLSPEYYDLARAHLRDEEKSCPCLAQEGPQGDLLTKTQELGRDYRTCLTIVQKLKKMVDKPTQRSVSNAATRVCRTGRSRWRDVCRNFMRRYQSRVTQGLVAGETAQQICEDLRLCIPSTGPL" mat_peptide 492..740 /gene="GNLY" /gene_synonym="D2S69E; LAG-2; LAG2; NKG5; TLA519" /product="granulysin" /experiment="DESCRIPTION:antimicrobial peptide[PMID: 10644038]" misc_feature 507..719 /gene="...
AA_position 28
Synonym: D2S69E; LAG-2; LAG2; NKG5; TLA519
NM_012483.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)
Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 1, mRNA. (6845 bp)
note="isoform 1 is encoded by transcript variant 1; UPF0547 protein C16orf87" /codon_start=1 /product="UPF0547 protein C16orf87 isoform 1" /protein_id="NP_001001436.1" /db_xref="CCDS:CCDS10724.1" /db_xref="GeneID:388272" /db_xref="HGNC:HGNC:33754" /translation="MSATRAKKVKMATKSCPECDQQVPVACKSCPCGYIFISRKLLNAKHSEKSPPSTENKHEAKRRRTERVRREKINSTVNKDLENRKRSRSNSHSDHIRRGRGRPKSASAKKHEEEREKQEKEIDIYANLSDEKAFVFSVALAEINRKIINQRLIL" misc_feature 71..145 /gene="C16orf87" /note="Uncharacterized protein family UPF0547; Region: UPF0547; pfam10571" /db_xref="CDD:402278" misc_feature 158..388 /gene="C16orf87" /note="...
AA_position 30
NM_001001436.4 - Homo sapiens (human) - NCBI - UCSC - RefEx(expression)

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Redirect URI : http://ggrna.dbcls.jp/hs/aa%3aCPC
lang : en | div : | spe : hs | query_string : aa:CPC | format : html | download : 

0.000 | 0.000 | search_start;
0.190 | 0.190 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:CPC)?source=Homo sapiens (human)?to=0&format=json
0.645 | 0.455 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:CPC)?source=Homo sapiens (human)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.650 | 0.006 | cgi_end;

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]