2025-07-02 10:36:46, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS NR_188616 1439 bp RNA linear PRI 21-SEP-2023 DEFINITION Homo sapiens uncharacterized LOC105376156 (LOC105376156), transcript variant 4, long non-coding RNA. ACCESSION NR_188616 XR_001746850 XR_007079762 VERSION NR_188616.1 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL161729.27. On or before Sep 21, 2023 this sequence version replaced XR_001746850.2, XR_007079762.1. ##Evidence-Data-START## Transcript exon combination :: SRR5189658.136896.1, SRR14038197.421337.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1966682, SAMEA1968540 [ECO:0000348] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-107 AL161729.27 134022-134128 108-1439 AL161729.27 144688-146019 FEATURES Location/Qualifiers source 1..1439 /organism="Homo sapiens" /mol_type="transcribed RNA" /db_xref="taxon:9606" /chromosome="9" /map="9q22.32" gene 1..1439 /gene="LOC105376156" /note="uncharacterized LOC105376156" /db_xref="GeneID:105376156" ncRNA 1..1439 /ncRNA_class="lncRNA" /gene="LOC105376156" /product="uncharacterized LOC105376156, transcript variant 4" /db_xref="GeneID:105376156" exon 1..107 /gene="LOC105376156" /inference="alignment:Splign:2.1.0" exon 108..1439 /gene="LOC105376156" /inference="alignment:Splign:2.1.0" regulatory 1416..1421 /regulatory_class="polyA_signal_sequence" /gene="LOC105376156" /note="hexamer: AATAAA" polyA_site 1439 /gene="LOC105376156" /note="major polyA site" ORIGIN
agagccgcagccgccgcgcaggcagggccgggccgggccgggtgcgcgggcacaaaggggccgctgcacatggcaggcaggcgagcagatgccagcagacagctttttgttttgtggaaggtagtacttgcaagggatgaaactggatattttactgaggagatttctaagcaaaatgtcgaagaagtgacttggttcctcccagttgattgtagtaaaatgcaagaagagagaaatgaattgaaaaaggaattgttgagcaaaaatgaaccagagtttaaagatttggaaaattctctgtctgttcatatgacgaaaaatgagaaagtgtgtactgaagagaacactaagggtgtggtggaccaaccatttcataaagagattagtgtggctgtgtaccatgaacttaatcagccatttcaacagaggccgggaatacagatgggattacacctgcagagacactgctggctgggactaaaaaaaacagaacatggaatggaatgaaggaaggccgtgactttgtgctatcatctagtaaaagggatgaagggccccgaggcaatttggaggtcctctgcctccaatttgaaggactattgccctggtttcaatagtccagacagcttccaaccaaagatgtggaggcacaatctttgcctggtagagaagctaggggtgcaacatctggccaggaatgctgctggggtgggacctttaccctagtggctccagaaggcagggcatcaaaccaaggattactcccaagccttaagatttcatggagtttgctttgtagtttggacttgcttgggactgggtcaccccttccttctgtgtttcttgcttttggaatgggaatgcctatcctatgcctgtcccaccaatgtattttggaagtatacaacttgtttggtttcacagattcgcagctggagaggaattttgccccaggatgaatcataactcaagtctcactgtacctaatttagaagatatttagaaaagactttggactttagacattagcgttgttgctggaatgagttaagactttggaggatggaatgaatgtacagatgctccttgacttagaatggggttatgtcccaataaacccattgtaagtaaaaaaatatataagtaaaaatgcattcagtaccctgataaacccatggtaaagtcaaaaaatcagaagatgcttttcaacttacaatggggttatttatttcctgatagacccatcgcaaaatttaaaaattgtaagttgaaccatcatatgttgaggacaatgtgtatttggcacatgagaaggacatgaattttggggggccaggggtagaatgctatggactgaacttatgtgtctccctaaaattcgtacgttatgaccctagttcctaatgtgatgaggaaataaatgttcattgtttaggcca
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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