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2025-07-02 10:31:19, GGRNA.v2 : RefSeq release 229 (Mar, 2025)

LOCUS       NR_187468                681 bp    RNA     linear   PRI 02-FEB-2025
DEFINITION  Homo sapiens SSPN antisense RNA 1 (SSPN-AS1), transcript variant 5,
            long non-coding RNA.
ACCESSION   NR_187468
VERSION     NR_187468.1
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC022509.21.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA2142348,
                              SAMEA2159931 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-165               AC022509.21        193481-193645       c
            166-681             AC022509.21        132974-133489       c
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Homo sapiens"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
                     /map="12p12.1"
     gene            1..681
                     /gene="SSPN-AS1"
                     /gene_synonym="ITPR2-AS1"
                     /note="SSPN antisense RNA 1"
                     /db_xref="GeneID:101928554"
                     /db_xref="HGNC:HGNC:56072"
     ncRNA           1..681
                     /ncRNA_class="lncRNA"
                     /gene="SSPN-AS1"
                     /gene_synonym="ITPR2-AS1"
                     /product="SSPN antisense RNA 1, transcript variant 5"
                     /db_xref="GeneID:101928554"
                     /db_xref="HGNC:HGNC:56072"
     exon            1..165
                     /gene="SSPN-AS1"
                     /gene_synonym="ITPR2-AS1"
                     /inference="alignment:Splign:2.1.0"
     exon            166..681
                     /gene="SSPN-AS1"
                     /gene_synonym="ITPR2-AS1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      658..663
                     /regulatory_class="polyA_signal_sequence"
                     /gene="SSPN-AS1"
                     /gene_synonym="ITPR2-AS1"
                     /note="hexamer: AATAAA"
     polyA_site      681
                     /gene="SSPN-AS1"
                     /gene_synonym="ITPR2-AS1"
                     /note="major polyA site"
ORIGIN      
gagccaaatgcagtgcttgcttcctatctgtggtccattgcatagcagtgtgcttgggtgctgcgtaagacaattccccccaacgcctccaaaaaataggacatggtccactgcaggagttcataatctaggagtccagagagtccaggctcatcatcccttcaggatattagaaaaccacccaatggaactgataaaaatgagttggaacttgtgaccagcagctggatgagaggagtgtgaatcccccaaatcttatggatatagtgtgctttctttgatgttcctgccaaagtgaggctggaaagctaggaagatctgtaagacgtgtgccagcacaaagtgactacaattcaaaagttccaaaaaccttgcttgaaacaattgcaaatagctcatcattttaaaccagtgaacccaaggctgagtgtttcatcaatttacagaaaaccaagaagagaaatctgacagctatcccagtgtatgacttaccatggagatcttcaaatagaatcactttggtttgggtctcattttcatattataacacaaatttgtgtatgtgggttaagattcatatttgataggaactgctgggaattcttgcagttatatcctcaaaagacaaaataagcataaccaacagaattgtgaagcaataaagttgattatggatgaaaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]