2025-07-02 10:31:19, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS NR_187468 681 bp RNA linear PRI 02-FEB-2025 DEFINITION Homo sapiens SSPN antisense RNA 1 (SSPN-AS1), transcript variant 5, long non-coding RNA. ACCESSION NR_187468 VERSION NR_187468.1 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC022509.21. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA2142348, SAMEA2159931 [ECO:0000348] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-165 AC022509.21 193481-193645 c 166-681 AC022509.21 132974-133489 c FEATURES Location/Qualifiers source 1..681 /organism="Homo sapiens" /mol_type="transcribed RNA" /db_xref="taxon:9606" /chromosome="12" /map="12p12.1" gene 1..681 /gene="SSPN-AS1" /gene_synonym="ITPR2-AS1" /note="SSPN antisense RNA 1" /db_xref="GeneID:101928554" /db_xref="HGNC:HGNC:56072" ncRNA 1..681 /ncRNA_class="lncRNA" /gene="SSPN-AS1" /gene_synonym="ITPR2-AS1" /product="SSPN antisense RNA 1, transcript variant 5" /db_xref="GeneID:101928554" /db_xref="HGNC:HGNC:56072" exon 1..165 /gene="SSPN-AS1" /gene_synonym="ITPR2-AS1" /inference="alignment:Splign:2.1.0" exon 166..681 /gene="SSPN-AS1" /gene_synonym="ITPR2-AS1" /inference="alignment:Splign:2.1.0" regulatory 658..663 /regulatory_class="polyA_signal_sequence" /gene="SSPN-AS1" /gene_synonym="ITPR2-AS1" /note="hexamer: AATAAA" polyA_site 681 /gene="SSPN-AS1" /gene_synonym="ITPR2-AS1" /note="major polyA site" ORIGIN
gagccaaatgcagtgcttgcttcctatctgtggtccattgcatagcagtgtgcttgggtgctgcgtaagacaattccccccaacgcctccaaaaaataggacatggtccactgcaggagttcataatctaggagtccagagagtccaggctcatcatcccttcaggatattagaaaaccacccaatggaactgataaaaatgagttggaacttgtgaccagcagctggatgagaggagtgtgaatcccccaaatcttatggatatagtgtgctttctttgatgttcctgccaaagtgaggctggaaagctaggaagatctgtaagacgtgtgccagcacaaagtgactacaattcaaaagttccaaaaaccttgcttgaaacaattgcaaatagctcatcattttaaaccagtgaacccaaggctgagtgtttcatcaatttacagaaaaccaagaagagaaatctgacagctatcccagtgtatgacttaccatggagatcttcaaatagaatcactttggtttgggtctcattttcatattataacacaaatttgtgtatgtgggttaagattcatatttgataggaactgctgggaattcttgcagttatatcctcaaaagacaaaataagcataaccaacagaattgtgaagcaataaagttgattatggatgaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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