GGRNA ver.2 Home | Help | Advanced search    Previous release (v1)

2025-10-18 11:41:32, GGRNA.v2 : RefSeq release 232 (Sep, 2025)

LOCUS       NR_187314                626 bp    RNA     linear   PRI 28-AUG-2023
DEFINITION  Homo sapiens long intergenic non-protein coding RNA 2756
            (LINC02756), transcript variant 7, long non-coding RNA.
ACCESSION   NR_187314
VERSION     NR_187314.1
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AP003028.2 and AP003055.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189658.146967.1,
                                           SRR5189667.75490.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2151119 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-101               AP003028.2         167461-167561
            102-205             AP003028.2         168448-168551
            206-313             AP003028.2         169140-169247
            314-626             AP003055.2         8384-8696
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Homo sapiens"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:9606"
                     /chromosome="11"
                     /map="11q14.3"
     gene            1..626
                     /gene="LINC02756"
                     /note="long intergenic non-protein coding RNA 2756"
                     /db_xref="GeneID:105369428"
                     /db_xref="HGNC:HGNC:54276"
     ncRNA           1..626
                     /ncRNA_class="lncRNA"
                     /gene="LINC02756"
                     /product="long intergenic non-protein coding RNA 2756,
                     transcript variant 7"
                     /db_xref="GeneID:105369428"
                     /db_xref="HGNC:HGNC:54276"
     exon            1..101
                     /gene="LINC02756"
                     /inference="alignment:Splign:2.1.0"
     exon            102..205
                     /gene="LINC02756"
                     /inference="alignment:Splign:2.1.0"
     exon            206..313
                     /gene="LINC02756"
                     /inference="alignment:Splign:2.1.0"
     exon            314..626
                     /gene="LINC02756"
                     /inference="alignment:Splign:2.1.0"
     regulatory      586..591
                     /regulatory_class="polyA_signal_sequence"
                     /gene="LINC02756"
                     /note="hexamer: ATTAAA"
     regulatory      597..602
                     /regulatory_class="polyA_signal_sequence"
                     /gene="LINC02756"
                     /note="hexamer: AATAAA"
     polyA_site      609
                     /gene="LINC02756"
                     /note="major polyA site"
     polyA_site      619
                     /gene="LINC02756"
                     /note="major polyA site"
ORIGIN      
aaagttacacaagaagaattggcccttgaccagcctgattggttgcaggaggggaccaatcagaggtacctcccatttttcatctgcagcccaatgcaaagtaatgacatggatctggagagattctcttaggagagaatctggctaagtgtctagcaggatgattgattaacaagatgttttgttttcatcatctcagagataactgtattgaggtataattgatatgccaaataactggacacattcaacttgtgcaatttgatgagtttggagatacacatacatctgtgaaaccatcaccaaaatcaagaacaactttctctgatctctgtggacatgcttaaaatggctgactcacacagcaagactatttaactgtgcctaaaatcaacccacattcagatgctaactgtaatcctattccctgatccatcaggaaaaagagtctgattgacataacttgtcaagtgttcgccccagcttctatcaactatggggaaggaagggccagaagaggtgtaaccatcatggctaccaggtttcgaaatatttacattacatactgcatttattaaaatacaaattaaatctgcaataaaaaactaattgaccattctctggga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]