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Previous release (v1)
2024-04-25 23:02:18, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_145985 134 bp RNA linear PRI 11-SEP-2020
DEFINITION Homo sapiens small nucleolar RNA, H/ACA box 31B (SNORA31B), small
nucleolar RNA.
ACCESSION NR_145985
VERSION NR_145985.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 134)
AUTHORS Jorjani H, Kehr S, Jedlinski DJ, Gumienny R, Hertel J, Stadler PF,
Zavolan M and Gruber AR.
TITLE An updated human snoRNAome
JOURNAL Nucleic Acids Res. 44 (11), 5068-5082 (2016)
PUBMED 27174936
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AL138963.20.
Sequence Note: This RefSeq record was created from genomic sequence
data. The genomic coordinates used for the transcript record were
based on predicted data.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-134 AL138963.20 142095-142228 c
FEATURES Location/Qualifiers
source 1..134
/organism="Homo sapiens"
/mol_type="transcribed RNA"
/db_xref="taxon:9606"
/chromosome="13"
/map="13q14.13"
gene 1..134
/gene="SNORA31B"
/note="small nucleolar RNA, H/ACA box 31B"
/db_xref="GeneID:109616966"
/db_xref="HGNC:HGNC:52201"
ncRNA 1..134
/ncRNA_class="snoRNA"
/gene="SNORA31B"
/product="small nucleolar RNA, H/ACA box 31B"
/db_xref="GeneID:109616966"
/db_xref="HGNC:HGNC:52201"
exon 1..134
/gene="SNORA31B"
/inference="alignment:Splign:2.1.0"
variation 1
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1878704678"
variation 2
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:1878704511"
variation 3
/gene="SNORA31B"
/replace="c"
/replace="g"
/db_xref="dbSNP:1238725814"
variation 6
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:924247036"
variation 8
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:1566174911"
variation 9
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1456617086"
variation 10
/gene="SNORA31B"
/replace="g"
/replace="t"
/db_xref="dbSNP:1878703838"
variation 11
/gene="SNORA31B"
/replace="a"
/replace="t"
/db_xref="dbSNP:1370223474"
variation 12
/gene="SNORA31B"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:962918606"
variation 13
/gene="SNORA31B"
/replace="c"
/replace="g"
/db_xref="dbSNP:181605788"
variation 15
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:1878703138"
variation 20
/gene="SNORA31B"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1878702954"
variation 22
/gene="SNORA31B"
/replace="c"
/replace="g"
/db_xref="dbSNP:1208267286"
variation 23..28
/gene="SNORA31B"
/replace="g"
/replace="gagcag"
/db_xref="dbSNP:1566174883"
variation 23
/gene="SNORA31B"
/replace="g"
/replace="t"
/db_xref="dbSNP:1878702647"
variation 24
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1878702439"
variation 26
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:1424260292"
variation 27
/gene="SNORA31B"
/replace=""
/replace="a"
/db_xref="dbSNP:1247341278"
variation 29
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:115687034"
variation 32
/gene="SNORA31B"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1878701713"
variation 33
/gene="SNORA31B"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:867663076"
variation 34
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:917666822"
variation 35
/gene="SNORA31B"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:960763995"
variation 36
/gene="SNORA31B"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1034637824"
variation 39
/gene="SNORA31B"
/replace="c"
/replace="g"
/db_xref="dbSNP:1878700929"
variation 41
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1395763359"
variation 42
/gene="SNORA31B"
/replace="a"
/replace="c"
/db_xref="dbSNP:1878700635"
variation 44
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:756282186"
variation 45..48
/gene="SNORA31B"
/replace="t"
/replace="tggt"
/db_xref="dbSNP:1878700116"
variation 45
/gene="SNORA31B"
/replace="g"
/replace="t"
/db_xref="dbSNP:373725404"
variation 50
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:966558167"
variation 54
/gene="SNORA31B"
/replace="c"
/replace="g"
/db_xref="dbSNP:1353847536"
variation 55
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:1462778337"
variation 56
/gene="SNORA31B"
/replace="a"
/replace="t"
/db_xref="dbSNP:959115790"
variation 58
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1878699035"
variation 59
/gene="SNORA31B"
/replace="c"
/replace="g"
/db_xref="dbSNP:1878698803"
variation 61
/gene="SNORA31B"
/replace=""
/replace="t"
/db_xref="dbSNP:1244889389"
variation 62
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1445405525"
variation 63
/gene="SNORA31B"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1011126383"
variation 64..71
/gene="SNORA31B"
/replace="aagaa"
/replace="aagaagaa"
/db_xref="dbSNP:1206285338"
variation 64
/gene="SNORA31B"
/replace="a"
/replace="c"
/db_xref="dbSNP:1340927767"
variation 66
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1878697952"
variation 69
/gene="SNORA31B"
/replace="c"
/replace="g"
/db_xref="dbSNP:1296028172"
variation 70
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:547244337"
variation 71
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1039302075"
variation 72
/gene="SNORA31B"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1249550749"
variation 73
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1228875194"
variation 74
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:1194171007"
variation 75
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:535562021"
variation 77
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:973929507"
variation 78..82
/gene="SNORA31B"
/replace="c"
/replace="cttgc"
/db_xref="dbSNP:1878696081"
variation 78
/gene="SNORA31B"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1006963226"
variation 82
/gene="SNORA31B"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:549476429"
variation 83
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1051092905"
variation 84
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:929963893"
variation 85
/gene="SNORA31B"
/replace="a"
/replace="t"
/db_xref="dbSNP:961569036"
variation 88
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:1385252702"
variation 89
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:1393159270"
variation 90..97
/gene="SNORA31B"
/replace="gtct"
/replace="gtctgtct"
/db_xref="dbSNP:751098993"
variation 90
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:778167923"
variation 91
/gene="SNORA31B"
/replace=""
/replace="t"
/db_xref="dbSNP:36064720"
variation 91
/gene="SNORA31B"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:375141872"
variation 91
/gene="SNORA31B"
/replace="t"
/replace="tt"
/db_xref="dbSNP:2138322239"
variation 92
/gene="SNORA31B"
/replace="c"
/replace="g"
/db_xref="dbSNP:1566174755"
variation 93
/gene="SNORA31B"
/replace="t"
/replace="tt"
/db_xref="dbSNP:2138322227"
variation 94
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1878694286"
variation 95
/gene="SNORA31B"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1388455200"
variation 96
/gene="SNORA31B"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1005282979"
variation 97
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:954698506"
variation 97
/gene="SNORA31B"
/replace="t"
/replace="tt"
/db_xref="dbSNP:960481071"
variation 98
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:527759676"
variation 99
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1274926289"
variation 100
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:1878692884"
variation 101
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:927718061"
variation 102
/gene="SNORA31B"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1030291420"
variation 103
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:566987275"
variation 104
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1878692243"
variation 106
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:1246347277"
variation 108
/gene="SNORA31B"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1878691891"
variation 109
/gene="SNORA31B"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1593553137"
variation 114
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1197922496"
variation 120
/gene="SNORA31B"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1449449881"
variation 122
/gene="SNORA31B"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1878691170"
variation 123
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:1878691018"
variation 125
/gene="SNORA31B"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1269015096"
variation 126
/gene="SNORA31B"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:551552998"
variation 128
/gene="SNORA31B"
/replace="c"
/replace="t"
/db_xref="dbSNP:533208366"
variation 130
/gene="SNORA31B"
/replace="c"
/replace="g"
/db_xref="dbSNP:576015536"
variation 131
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:190422201"
variation 132
/gene="SNORA31B"
/replace="a"
/replace="g"
/db_xref="dbSNP:756201146"
variation 133
/gene="SNORA31B"
/replace="c"
/replace="g"
/db_xref="dbSNP:1878689771"
ORIGIN
atgcatctatttgacagacctggagcagttgctatctgctgctatggtttccaccacagatgcaagaagaacatgtccttgcgctttccgtctgtctaattgtggcagctgagattgaatagaggaatacagga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]