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Previous release (v1)
2024-04-25 18:35:13, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_134294 271 bp RNA linear PRI 19-APR-2022
DEFINITION Homo sapiens uncharacterized LOC100507464 (LOC100507464), long
non-coding RNA.
ACCESSION NR_134294 XR_108905 XR_171722
VERSION NR_134294.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AC090155.10 and AW103845.1.
On or before Dec 17, 2015 this sequence version replaced
XR_108905.3, XR_171722.3.
##Evidence-Data-START##
Transcript exon combination :: AW103845.1, SRR5189667.285030.1
[ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA1968968, SAMEA2148874
[ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-1 AC090155.10 78487-78487
2-271 AW103845.1 1-270 c
FEATURES Location/Qualifiers
source 1..271
/organism="Homo sapiens"
/mol_type="transcribed RNA"
/db_xref="taxon:9606"
/chromosome="8"
/map="8q11.21"
gene 1..271
/gene="LOC100507464"
/note="uncharacterized LOC100507464"
/db_xref="GeneID:100507464"
ncRNA 1..271
/ncRNA_class="lncRNA"
/gene="LOC100507464"
/product="uncharacterized LOC100507464"
/db_xref="GeneID:100507464"
exon 1..54
/gene="LOC100507464"
/inference="alignment:Splign:2.1.0"
variation 3
/gene="LOC100507464"
/replace=""
/replace="g"
/db_xref="dbSNP:1401544627"
variation 7
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1394991598"
variation 9
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:2129294708"
variation 13
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1806570853"
variation 16
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:750255310"
variation 18
/gene="LOC100507464"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1563416946"
variation 19
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1301564489"
variation 21
/gene="LOC100507464"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:545039273"
variation 22
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1017079779"
variation 24
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1053067190"
variation 25
/gene="LOC100507464"
/replace="a"
/replace="c"
/db_xref="dbSNP:1006148082"
variation 26
/gene="LOC100507464"
/replace="a"
/replace="c"
/db_xref="dbSNP:1806570578"
variation 27
/gene="LOC100507464"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1806570539"
variation 28
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1258446026"
variation 30
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:887513964"
variation 31
/gene="LOC100507464"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1207781281"
variation 33
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1806570441"
variation 34
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:904617057"
variation 35
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1806570372"
variation 37
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1806570336"
variation 38
/gene="LOC100507464"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1026092544"
variation 41
/gene="LOC100507464"
/replace="a"
/replace="c"
/db_xref="dbSNP:1806570264"
variation 42
/gene="LOC100507464"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1585481402"
variation 44
/gene="LOC100507464"
/replace="c"
/replace="g"
/db_xref="dbSNP:993159663"
variation 49
/gene="LOC100507464"
/replace="a"
/replace="c"
/db_xref="dbSNP:1806570188"
variation 54
/gene="LOC100507464"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1260485496"
exon 55..267
/gene="LOC100507464"
/inference="alignment:Splign:2.1.0"
variation 57..62
/gene="LOC100507464"
/replace="gaga"
/replace="gagaga"
/db_xref="dbSNP:1334209584"
variation 60
/gene="LOC100507464"
/replace="a"
/replace="c"
/db_xref="dbSNP:1004083358"
variation 68
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1221881153"
variation 71
/gene="LOC100507464"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:906704022"
variation 72
/gene="LOC100507464"
/replace="a"
/replace="t"
/db_xref="dbSNP:2129293057"
variation 73
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1255109490"
variation 76
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1806352190"
variation 77
/gene="LOC100507464"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1045868277"
variation 78
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:556619235"
variation 84
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1000812402"
variation 92
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1248079182"
variation 94
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1806352077"
variation 96
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1452495933"
variation 102
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1806352031"
variation 103
/gene="LOC100507464"
/replace="g"
/replace="t"
/db_xref="dbSNP:1806351993"
variation 106
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1159707224"
variation 108
/gene="LOC100507464"
/replace="g"
/replace="t"
/db_xref="dbSNP:1292477634"
variation 113
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1459406296"
variation 114
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:2129293055"
variation 117
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1166556744"
variation 120
/gene="LOC100507464"
/replace="a"
/replace="t"
/db_xref="dbSNP:894131962"
variation 121
/gene="LOC100507464"
/replace="c"
/replace="g"
/db_xref="dbSNP:1806351865"
variation 128
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1038025255"
variation 130
/gene="LOC100507464"
/replace="a"
/replace="c"
/db_xref="dbSNP:1806351820"
variation 135
/gene="LOC100507464"
/replace="g"
/replace="t"
/db_xref="dbSNP:1806351789"
variation 138
/gene="LOC100507464"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1440951005"
variation 140
/gene="LOC100507464"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1296116293"
variation 141
/gene="LOC100507464"
/replace="a"
/replace="c"
/db_xref="dbSNP:2129293054"
variation 144
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:941280157"
variation 145
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:908489038"
variation 146
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1806351629"
variation 148
/gene="LOC100507464"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:763632931"
variation 149
/gene="LOC100507464"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1393538905"
variation 161
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1806351535"
variation 164
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:80130201"
variation 166
/gene="LOC100507464"
/replace="a"
/replace="t"
/db_xref="dbSNP:2129293052"
variation 171
/gene="LOC100507464"
/replace="a"
/replace="c"
/db_xref="dbSNP:2129293051"
variation 174
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1365618467"
variation 175
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1806351411"
variation 181
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:2129293050"
variation 184
/gene="LOC100507464"
/replace="a"
/replace="t"
/db_xref="dbSNP:192482813"
variation 191
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:774858898"
variation 192
/gene="LOC100507464"
/replace="a"
/replace="t"
/db_xref="dbSNP:1806351310"
variation 195
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1806351281"
variation 198
/gene="LOC100507464"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1806351254"
variation 200
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1806351230"
variation 201
/gene="LOC100507464"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:141340256"
variation 202
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:964154295"
variation 204
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1306026102"
variation 205
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1038083602"
variation 208
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:915240383"
variation 216
/gene="LOC100507464"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:534193159"
variation 217
/gene="LOC100507464"
/replace="g"
/replace="t"
/db_xref="dbSNP:75723380"
variation 218
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1474147442"
variation 222
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:956696623"
variation 223
/gene="LOC100507464"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1031629740"
variation 224
/gene="LOC100507464"
/replace="a"
/replace="c"
/db_xref="dbSNP:1806350888"
variation 225
/gene="LOC100507464"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1806350857"
variation 226
/gene="LOC100507464"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:80024861"
variation 227
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1170448713"
variation 230
/gene="LOC100507464"
/replace="a"
/replace="t"
/db_xref="dbSNP:971274865"
variation 231
/gene="LOC100507464"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1806350725"
variation 232
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1806350702"
variation 236
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1463840050"
variation 241
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1806350645"
variation 243
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1806350618"
variation 244
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1806350598"
variation 246
/gene="LOC100507464"
/replace="c"
/replace="t"
/db_xref="dbSNP:1806350576"
variation 251
/gene="LOC100507464"
/replace="a"
/replace="t"
/db_xref="dbSNP:1806350556"
variation 262
/gene="LOC100507464"
/replace="a"
/replace="c"
/db_xref="dbSNP:1806350533"
variation 264
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1309090139"
variation 266
/gene="LOC100507464"
/replace="g"
/replace="t"
/db_xref="dbSNP:1806350489"
variation 267
/gene="LOC100507464"
/replace="a"
/replace="g"
/db_xref="dbSNP:1806350471"
ORIGIN
gagatcaaggaagaggaacacgataaaatgcttatggctccaagaagaaatagggtgagagataggaccacaaattgtttactcatttcaaccagtaaacatgtcctgcaatgtcaatctgtctttctgccacagcagttctgcgcctcctgagttgtttccatctccctccagtcattcaggaccaccaatgagatttgtgatatttggaaaactgccacccagtgcctccttttcctaatctgctgaataaagttaataagactaaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]