2024-05-02 19:10:21, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_132981 105 bp RNA linear PRI 11-SEP-2020 DEFINITION Homo sapiens small nucleolar RNA, C/D box 141B (SNORD141B), small nucleolar RNA. ACCESSION NR_132981 VERSION NR_132981.1 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 105) AUTHORS Machyna M, Kehr S, Straube K, Kappei D, Buchholz F, Butter F, Ule J, Hertel J, Stadler PF and Neugebauer KM. TITLE The coilin interactome identifies hundreds of small noncoding RNAs that traffic through Cajal bodies JOURNAL Mol. Cell 56 (3), 389-399 (2014) PUBMED 25514182 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC010627.7. Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on predicted data. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-105 AC010627.7 9719-9823 FEATURES Location/Qualifiers source 1..105 /organism="Homo sapiens" /mol_type="transcribed RNA" /db_xref="taxon:9606" /chromosome="5" /map="5p15.2" gene 1..105 /gene="SNORD141B" /note="small nucleolar RNA, C/D box 141B" /db_xref="GeneID:106635684" /db_xref="HGNC:HGNC:51407" ncRNA 1..105 /ncRNA_class="snoRNA" /gene="SNORD141B" /product="small nucleolar RNA, C/D box 141B" /db_xref="GeneID:106635684" /db_xref="HGNC:HGNC:51407" exon 1..105 /gene="SNORD141B" /inference="alignment:Splign:2.1.0" variation 1 /gene="SNORD141B" /replace="g" /replace="t" /db_xref="dbSNP:971575443" variation 4 /gene="SNORD141B" /replace="" /replace="t" /db_xref="dbSNP:527696627" variation 4 /gene="SNORD141B" /replace="c" /replace="t" /db_xref="dbSNP:1579948006" variation 7 /gene="SNORD141B" /replace="c" /replace="g" /db_xref="dbSNP:1579948004" variation 11 /gene="SNORD141B" /replace="a" /replace="g" /db_xref="dbSNP:1735544463" variation 12 /gene="SNORD141B" /replace="a" /replace="t" /db_xref="dbSNP:1735544433" variation 17 /gene="SNORD141B" /replace="c" /replace="t" /db_xref="dbSNP:1196984029" variation 18 /gene="SNORD141B" /replace="a" /replace="g" /db_xref="dbSNP:1265274945" variation 20 /gene="SNORD141B" /replace="c" /replace="t" /db_xref="dbSNP:989074132" variation 21 /gene="SNORD141B" /replace="a" /replace="g" /db_xref="dbSNP:1735544300" variation 28 /gene="SNORD141B" /replace="c" /replace="t" /db_xref="dbSNP:1457422292" variation 29 /gene="SNORD141B" /replace="a" /replace="g" /db_xref="dbSNP:957891640" variation 33 /gene="SNORD141B" /replace="c" /replace="t" /db_xref="dbSNP:1735544199" variation 36 /gene="SNORD141B" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:555111123" variation 40 /gene="SNORD141B" /replace="a" /replace="c" /db_xref="dbSNP:192400113" variation 43 /gene="SNORD141B" /replace="c" /replace="t" /db_xref="dbSNP:964765168" variation 47 /gene="SNORD141B" /replace="a" /replace="g" /db_xref="dbSNP:1735544040" variation 51 /gene="SNORD141B" /replace="a" /replace="c" /db_xref="dbSNP:1579947976" variation 52..54 /gene="SNORD141B" /replace="cc" /replace="ccc" /db_xref="dbSNP:1735543889" variation 52 /gene="SNORD141B" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:188833499" variation 53 /gene="SNORD141B" /replace="c" /replace="t" /db_xref="dbSNP:1735543916" variation 56 /gene="SNORD141B" /replace="a" /replace="c" /db_xref="dbSNP:1263129593" variation 59 /gene="SNORD141B" /replace="a" /replace="g" /db_xref="dbSNP:1579947963" variation 60 /gene="SNORD141B" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:890960524" variation 62 /gene="SNORD141B" /replace="a" /replace="g" /db_xref="dbSNP:1735543740" variation 73 /gene="SNORD141B" /replace="c" /replace="t" /db_xref="dbSNP:1489477124" variation 74 /gene="SNORD141B" /replace="g" /replace="t" /db_xref="dbSNP:2126803890" variation 75 /gene="SNORD141B" /replace="g" /replace="t" /db_xref="dbSNP:2057633350" variation 93 /gene="SNORD141B" /replace="c" /replace="t" /db_xref="dbSNP:1264751913" ORIGIN
gtctgtcaaggatgttcgtcgtggcaacgttgctggtgacagcaaaaatgacccaccaatggaagcagctggcttcactgctcaggtgattatcctgaaccatcc
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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