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2024-05-01 03:42:41, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NR_132981                105 bp    RNA     linear   PRI 11-SEP-2020
DEFINITION  Homo sapiens small nucleolar RNA, C/D box 141B (SNORD141B), small
            nucleolar RNA.
ACCESSION   NR_132981
VERSION     NR_132981.1
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 105)
  AUTHORS   Machyna M, Kehr S, Straube K, Kappei D, Buchholz F, Butter F, Ule
            J, Hertel J, Stadler PF and Neugebauer KM.
  TITLE     The coilin interactome identifies hundreds of small noncoding RNAs
            that traffic through Cajal bodies
  JOURNAL   Mol. Cell 56 (3), 389-399 (2014)
   PUBMED   25514182
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC010627.7.
            
            Sequence Note: This RefSeq record was created from genomic sequence
            data to make the sequence consistent with the reference genome
            assembly. The genomic coordinates used for the transcript record
            were based on predicted data.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-105               AC010627.7         9719-9823
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Homo sapiens"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:9606"
                     /chromosome="5"
                     /map="5p15.2"
     gene            1..105
                     /gene="SNORD141B"
                     /note="small nucleolar RNA, C/D box 141B"
                     /db_xref="GeneID:106635684"
                     /db_xref="HGNC:HGNC:51407"
     ncRNA           1..105
                     /ncRNA_class="snoRNA"
                     /gene="SNORD141B"
                     /product="small nucleolar RNA, C/D box 141B"
                     /db_xref="GeneID:106635684"
                     /db_xref="HGNC:HGNC:51407"
     exon            1..105
                     /gene="SNORD141B"
                     /inference="alignment:Splign:2.1.0"
     variation       1
                     /gene="SNORD141B"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:971575443"
     variation       4
                     /gene="SNORD141B"
                     /replace=""
                     /replace="t"
                     /db_xref="dbSNP:527696627"
     variation       4
                     /gene="SNORD141B"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1579948006"
     variation       7
                     /gene="SNORD141B"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:1579948004"
     variation       11
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1735544463"
     variation       12
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:1735544433"
     variation       17
                     /gene="SNORD141B"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1196984029"
     variation       18
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1265274945"
     variation       20
                     /gene="SNORD141B"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:989074132"
     variation       21
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1735544300"
     variation       28
                     /gene="SNORD141B"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1457422292"
     variation       29
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:957891640"
     variation       33
                     /gene="SNORD141B"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1735544199"
     variation       36
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:555111123"
     variation       40
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:192400113"
     variation       43
                     /gene="SNORD141B"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:964765168"
     variation       47
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1735544040"
     variation       51
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:1579947976"
     variation       52..54
                     /gene="SNORD141B"
                     /replace="cc"
                     /replace="ccc"
                     /db_xref="dbSNP:1735543889"
     variation       52
                     /gene="SNORD141B"
                     /replace="c"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:188833499"
     variation       53
                     /gene="SNORD141B"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1735543916"
     variation       56
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:1263129593"
     variation       59
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1579947963"
     variation       60
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:890960524"
     variation       62
                     /gene="SNORD141B"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1735543740"
     variation       73
                     /gene="SNORD141B"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1489477124"
     variation       74
                     /gene="SNORD141B"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:2126803890"
     variation       75
                     /gene="SNORD141B"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:2057633350"
     variation       93
                     /gene="SNORD141B"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1264751913"
ORIGIN      
gtctgtcaaggatgttcgtcgtggcaacgttgctggtgacagcaaaaatgacccaccaatggaagcagctggcttcactgctcaggtgattatcctgaaccatcc
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]