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Previous release (v1)
2024-04-30 20:20:27, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_132980 105 bp RNA linear PRI 08-SEP-2020
DEFINITION Homo sapiens small nucleolar RNA, C/D box 141A (SNORD141A), small
nucleolar RNA.
ACCESSION NR_132980
VERSION NR_132980.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 105)
AUTHORS Machyna M, Kehr S, Straube K, Kappei D, Buchholz F, Butter F, Ule
J, Hertel J, Stadler PF and Neugebauer KM.
TITLE The coilin interactome identifies hundreds of small noncoding RNAs
that traffic through Cajal bodies
JOURNAL Mol. Cell 56 (3), 389-399 (2014)
PUBMED 25514182
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AL593851.6.
Sequence Note: This RefSeq record was created from genomic sequence
data to make the sequence consistent with the reference genome
assembly. The genomic coordinates used for the transcript record
were based on predicted data.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-105 AL593851.6 67166-67270
FEATURES Location/Qualifiers
source 1..105
/organism="Homo sapiens"
/mol_type="transcribed RNA"
/db_xref="taxon:9606"
/chromosome="9"
/map="9q34.13"
gene 1..105
/gene="SNORD141A"
/note="small nucleolar RNA, C/D box 141A"
/db_xref="GeneID:106635683"
/db_xref="HGNC:HGNC:51406"
ncRNA 1..105
/ncRNA_class="snoRNA"
/gene="SNORD141A"
/product="small nucleolar RNA, C/D box 141A"
/db_xref="GeneID:106635683"
/db_xref="HGNC:HGNC:51406"
exon 1..105
/gene="SNORD141A"
/inference="alignment:Splign:2.1.0"
variation 2
/gene="SNORD141A"
/replace="a"
/replace="t"
/db_xref="dbSNP:558732065"
variation 4
/gene="SNORD141A"
/replace="g"
/replace="t"
/db_xref="dbSNP:1588453602"
variation 5
/gene="SNORD141A"
/replace="c"
/replace="g"
/db_xref="dbSNP:1412901623"
variation 6
/gene="SNORD141A"
/replace="c"
/replace="t"
/db_xref="dbSNP:1161856027"
variation 7
/gene="SNORD141A"
/replace="c"
/replace="g"
/db_xref="dbSNP:1588453611"
variation 8
/gene="SNORD141A"
/replace="a"
/replace="c"
/db_xref="dbSNP:576998650"
variation 10
/gene="SNORD141A"
/replace="a"
/replace="g"
/db_xref="dbSNP:1479640020"
variation 16
/gene="SNORD141A"
/replace="c"
/replace="t"
/db_xref="dbSNP:1588453625"
variation 17
/gene="SNORD141A"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1268589645"
variation 18
/gene="SNORD141A"
/replace="a"
/replace="g"
/db_xref="dbSNP:1192338419"
variation 19
/gene="SNORD141A"
/replace="a"
/replace="t"
/db_xref="dbSNP:1588453632"
variation 20
/gene="SNORD141A"
/replace="c"
/replace="t"
/db_xref="dbSNP:544520405"
variation 21
/gene="SNORD141A"
/replace="a"
/replace="g"
/db_xref="dbSNP:1248013971"
variation 22
/gene="SNORD141A"
/replace="a"
/replace="t"
/db_xref="dbSNP:1588453639"
variation 25
/gene="SNORD141A"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1588453641"
variation 28
/gene="SNORD141A"
/replace="c"
/replace="t"
/db_xref="dbSNP:1212947065"
variation 29
/gene="SNORD141A"
/replace="a"
/replace="g"
/db_xref="dbSNP:1464169219"
variation 31
/gene="SNORD141A"
/replace="g"
/replace="t"
/db_xref="dbSNP:1268314910"
variation 35
/gene="SNORD141A"
/replace="a"
/replace="g"
/db_xref="dbSNP:1242403495"
variation 44
/gene="SNORD141A"
/replace="a"
/replace="c"
/db_xref="dbSNP:1321203221"
variation 46
/gene="SNORD141A"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1300305331"
variation 49
/gene="SNORD141A"
/replace="c"
/replace="t"
/db_xref="dbSNP:1588453657"
variation 51
/gene="SNORD141A"
/replace="a"
/replace="c"
/db_xref="dbSNP:1588453660"
variation 52
/gene="SNORD141A"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1588453665"
variation 53
/gene="SNORD141A"
/replace="a"
/replace="c"
/db_xref="dbSNP:1271452087"
variation 54
/gene="SNORD141A"
/replace="a"
/replace="c"
/db_xref="dbSNP:1849582953"
variation 55
/gene="SNORD141A"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1588453669"
variation 56
/gene="SNORD141A"
/replace="a"
/replace="c"
/db_xref="dbSNP:1588453674"
variation 59
/gene="SNORD141A"
/replace="a"
/replace="g"
/db_xref="dbSNP:1849583015"
variation 61
/gene="SNORD141A"
/replace="a"
/replace="g"
/db_xref="dbSNP:1468229975"
variation 62
/gene="SNORD141A"
/replace="c"
/replace="g"
/db_xref="dbSNP:1369558864"
variation 65
/gene="SNORD141A"
/replace="a"
/replace="g"
/db_xref="dbSNP:1287206943"
variation 67
/gene="SNORD141A"
/replace="a"
/replace="t"
/db_xref="dbSNP:1588453681"
variation 71
/gene="SNORD141A"
/replace="a"
/replace="g"
/db_xref="dbSNP:1430050403"
variation 72
/gene="SNORD141A"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1849583136"
variation 73
/gene="SNORD141A"
/replace="a"
/replace="c"
/db_xref="dbSNP:1849583169"
variation 74
/gene="SNORD141A"
/replace="c"
/replace="t"
/db_xref="dbSNP:1849583187"
variation 76
/gene="SNORD141A"
/replace="c"
/replace="t"
/db_xref="dbSNP:1588453689"
variation 77
/gene="SNORD141A"
/replace="a"
/replace="g"
/db_xref="dbSNP:1389702580"
variation 78
/gene="SNORD141A"
/replace="c"
/replace="t"
/db_xref="dbSNP:1322856048"
variation 79
/gene="SNORD141A"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1849583260"
variation 80
/gene="SNORD141A"
/replace="c"
/replace="g"
/db_xref="dbSNP:1468414268"
variation 81
/gene="SNORD141A"
/replace="a"
/replace="c"
/db_xref="dbSNP:1849583563"
variation 82
/gene="SNORD141A"
/replace="g"
/replace="t"
/db_xref="dbSNP:1588453696"
variation 86
/gene="SNORD141A"
/replace="a"
/replace="g"
/db_xref="dbSNP:1429102470"
variation 88
/gene="SNORD141A"
/replace="g"
/replace="t"
/db_xref="dbSNP:1588453701"
variation 94
/gene="SNORD141A"
/replace="c"
/replace="t"
/db_xref="dbSNP:1177244382"
variation 96
/gene="SNORD141A"
/replace="c"
/replace="t"
/db_xref="dbSNP:1199280599"
variation 100
/gene="SNORD141A"
/replace="a"
/replace="c"
/db_xref="dbSNP:200773990"
variation 102
/gene="SNORD141A"
/replace="a"
/replace="t"
/db_xref="dbSNP:1184276939"
variation 103
/gene="SNORD141A"
/replace="c"
/replace="t"
/db_xref="dbSNP:999321414"
variation 104
/gene="SNORD141A"
/replace="c"
/replace="t"
/db_xref="dbSNP:1453349451"
ORIGIN
gtctgtcaaggatgttcgtcgtggcaacgttgctggtgacagcaaaaatgacccaccaatggaagcagctggcttcactgctcaggtgattatcctgaaccatcc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]