2024-04-25 13:24:30, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_125890 535 bp RNA linear PRI 19-JUL-2023 DEFINITION Homo sapiens uncharacterized LOC101928198 (LOC101928198), non-coding RNA. ACCESSION NR_125890 VERSION NR_125890.2 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 535) AUTHORS Otowa T, Maher BS, Aggen SH, McClay JL, van den Oord EJ and Hettema JM. TITLE Genome-wide and gene-based association studies of anxiety disorders in European and African American samples JOURNAL PLoS One 9 (11), e112559 (2014) PUBMED 25390645 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 535) AUTHORS Lou X, Kang B, Zhang J, Hao C, Tian X, Li W, Xu N, Lu Y and Liu S. TITLE MFAP3L activation promotes colorectal cancer cell invasion and metastasis JOURNAL Biochim Biophys Acta 1842 (9), 1423-1432 (2014) PUBMED 24735981 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC031941.1. On Jun 1, 2019 this sequence version replaced NR_125890.1. ##Evidence-Data-START## Transcript exon combination :: BC031941.1, BG718733.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2151119 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-535 BC031941.1 29-563 FEATURES Location/Qualifiers source 1..535 /organism="Homo sapiens" /mol_type="transcribed RNA" /db_xref="taxon:9606" /chromosome="4" /map="4q33" gene 1..535 /gene="LOC101928198" /note="uncharacterized LOC101928198" /db_xref="GeneID:101928198" misc_RNA 1..535 /gene="LOC101928198" /product="uncharacterized LOC101928198" /db_xref="GeneID:101928198" exon 1..220 /gene="LOC101928198" /inference="alignment:Splign:2.1.0" variation 1 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1433511239" variation 2 /gene="LOC101928198" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1286364997" variation 4..21 /gene="LOC101928198" /replace="gtg" /replace="gtgaggcctctcacggtg" /db_xref="dbSNP:1383445180" variation 6 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1375276284" variation 9 /gene="LOC101928198" /replace="c" /replace="g" /db_xref="dbSNP:1730681566" variation 10 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730681523" variation 11 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:1581548234" variation 12 /gene="LOC101928198" /replace="a" /replace="t" /db_xref="dbSNP:1730681445" variation 17..27 /gene="LOC101928198" /replace="c" /replace="cggtgggaccc" /db_xref="dbSNP:1464429436" variation 17 /gene="LOC101928198" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:556921849" variation 18 /gene="LOC101928198" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:929415687" variation 19 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1416718210" variation 23 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1001196715" variation 25 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730681111" variation 29 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1190893269" variation 31 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730680911" variation 35 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1472647562" variation 40 /gene="LOC101928198" /replace="g" /replace="t" /db_xref="dbSNP:920661939" variation 44 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1239087552" variation 45 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1473015119" variation 47 /gene="LOC101928198" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1730680690" variation 50 /gene="LOC101928198" /replace="a" /replace="t" /db_xref="dbSNP:973432650" variation 57 /gene="LOC101928198" /replace="c" /replace="g" /db_xref="dbSNP:1185406934" variation 58 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:1474742874" variation 60 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730680514" variation 62 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730680474" variation 64 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:965087619" variation 68 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:559436838" variation 69 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:988134987" variation 70 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730680320" variation 71..75 /gene="LOC101928198" /replace="ag" /replace="agcag" /db_xref="dbSNP:544789402" variation 75 /gene="LOC101928198" /replace="c" /replace="g" /db_xref="dbSNP:1730680207" variation 76 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730680166" variation 82 /gene="LOC101928198" /replace="g" /replace="t" /db_xref="dbSNP:1561001213" variation 85..87 /gene="LOC101928198" /replace="c" /replace="ccc" /db_xref="dbSNP:2111108451" variation 86 /gene="LOC101928198" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:568337227" variation 97 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730680053" variation 99 /gene="LOC101928198" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:112443992" variation 100 /gene="LOC101928198" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:187392973" variation 105 /gene="LOC101928198" /replace="a" /replace="t" /db_xref="dbSNP:1730679893" variation 107 /gene="LOC101928198" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1730679828" variation 110 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1283492026" variation 116 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1360191846" variation 123 /gene="LOC101928198" /replace="g" /replace="t" /db_xref="dbSNP:1208131349" variation 124 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1329964583" variation 128 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:1730679586" variation 130 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:1031837245" variation 132 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1447765719" variation 137..139 /gene="LOC101928198" /replace="gg" /replace="ggg" /db_xref="dbSNP:1730679441" variation 138 /gene="LOC101928198" /replace="c" /replace="g" /db_xref="dbSNP:1291815744" variation 139 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1353237645" variation 140 /gene="LOC101928198" /replace="a" /replace="t" /db_xref="dbSNP:369082030" variation 147 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1288478163" variation 154 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:1231750911" variation 155 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730679233" variation 158 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:2111108411" variation 160 /gene="LOC101928198" /replace="c" /replace="g" /db_xref="dbSNP:1730679196" variation 169 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730679161" variation 171 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730679060" variation 173 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:771971689" variation 176 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:748422727" variation 177 /gene="LOC101928198" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:570682442" variation 178 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1442868682" variation 179 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730678873" variation 184 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730678832" variation 188 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730678786" variation 189 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:552670516" variation 193 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1036535500" variation 195 /gene="LOC101928198" /replace="a" /replace="t" /db_xref="dbSNP:72702360" variation 200 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:2111108389" variation 203 /gene="LOC101928198" /replace="c" /replace="g" /db_xref="dbSNP:1183201096" variation 204 /gene="LOC101928198" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:563487268" variation 207 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:1730678411" variation 212 /gene="LOC101928198" /replace="c" /replace="g" /db_xref="dbSNP:894805631" variation 215 /gene="LOC101928198" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1411447652" variation 219 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730678306" exon 221..410 /gene="LOC101928198" /inference="alignment:Splign:2.1.0" variation 223..228 /gene="LOC101928198" /replace="aac" /replace="aacaac" /db_xref="dbSNP:1176184880" variation 227 /gene="LOC101928198" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1025947710" variation 228 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730669315" variation 232 /gene="LOC101928198" /replace="" /replace="t" /db_xref="dbSNP:1730669276" variation 232 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:78572691" variation 234 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730669177" variation 243 /gene="LOC101928198" /replace="c" /replace="g" /db_xref="dbSNP:1468734603" variation 249 /gene="LOC101928198" /replace="g" /replace="t" /db_xref="dbSNP:2111107986" variation 251 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1174221383" variation 253 /gene="LOC101928198" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:913254785" variation 255 /gene="LOC101928198" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1730668935" variation 261 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1432646132" variation 263 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:899077984" variation 266 /gene="LOC101928198" /replace="g" /replace="t" /db_xref="dbSNP:1037960283" variation 273..275 /gene="LOC101928198" /replace="a" /replace="aca" /db_xref="dbSNP:1730668519" variation 274 /gene="LOC101928198" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1371465118" variation 275 /gene="LOC101928198" /replace="a" /replace="t" /db_xref="dbSNP:1441718530" variation 278 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1007377410" variation 279 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1478968082" variation 285 /gene="LOC101928198" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:570619695" variation 286 /gene="LOC101928198" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1730668215" variation 287 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1051874855" variation 289 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:933366723" variation 296 /gene="LOC101928198" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:924622102" variation 297 /gene="LOC101928198" /replace="g" /replace="t" /db_xref="dbSNP:1730667923" variation 300 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1041693977" variation 301 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1275783775" variation 304 /gene="LOC101928198" /replace="c" /replace="g" /db_xref="dbSNP:1730667793" variation 305..311 /gene="LOC101928198" /replace="tcat" /replace="tcatcat" /db_xref="dbSNP:1730667681" variation 308 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:552402991" variation 312 /gene="LOC101928198" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1278774734" variation 315 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730667592" variation 319 /gene="LOC101928198" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:370462550" variation 320 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:914808337" variation 323 /gene="LOC101928198" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1203341723" variation 325..328 /gene="LOC101928198" /replace="ca" /replace="caca" /db_xref="dbSNP:935922955" variation 329 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730667306" variation 330 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1249221381" variation 337 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730667263" variation 338 /gene="LOC101928198" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:927108534" variation 339 /gene="LOC101928198" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:151117045" variation 340 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:937540444" variation 345 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1252371454" variation 348 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1452485229" variation 350 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:928775041" variation 352 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1419925598" variation 356 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:1312249774" variation 362 /gene="LOC101928198" /replace="c" /replace="g" /db_xref="dbSNP:2111107896" variation 369 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730666828" variation 371..372 /gene="LOC101928198" /replace="" /replace="ct" /db_xref="dbSNP:1409111108" variation 376 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730666745" variation 387 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:2111107888" variation 388..389 /gene="LOC101928198" /replace="c" /replace="cc" /db_xref="dbSNP:1351771884" variation 388 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:187044762" variation 390 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730666606" variation 393 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:970433450" variation 397 /gene="LOC101928198" /replace="a" /replace="t" /db_xref="dbSNP:1730666540" variation 398 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730666502" variation 399 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1221591485" variation 402 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:548425098" variation 408 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:2111107873" variation 409 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:1730666340" exon 411..535 /gene="LOC101928198" /inference="alignment:Splign:2.1.0" variation 419 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730664041" variation 420 /gene="LOC101928198" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:532671989" variation 422 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730663921" variation 423 /gene="LOC101928198" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1255921459" variation 425 /gene="LOC101928198" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1181645335" variation 426 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730663743" variation 428 /gene="LOC101928198" /replace="a" /replace="t" /db_xref="dbSNP:1229635736" variation 429 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730663639" variation 434 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730663607" variation 436 /gene="LOC101928198" /replace="g" /replace="t" /db_xref="dbSNP:1730663577" variation 437 /gene="LOC101928198" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1041725207" variation 441 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:2111107736" variation 442 /gene="LOC101928198" /replace="a" /replace="t" /db_xref="dbSNP:1730663554" variation 447 /gene="LOC101928198" /replace="" /replace="c" /db_xref="dbSNP:1213458039" variation 448 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:186122342" variation 452 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730663462" variation 457 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1486146124" variation 459..460 /gene="LOC101928198" /replace="c" /replace="cc" /db_xref="dbSNP:1730663411" variation 466..468 /gene="LOC101928198" /replace="aaa" /replace="aaaa" /db_xref="dbSNP:1730663380" variation 467 /gene="LOC101928198" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1040414450" variation 470 /gene="LOC101928198" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1483831521" variation 472 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730663308" variation 474 /gene="LOC101928198" /replace="a" /replace="t" /db_xref="dbSNP:1730663276" variation 476 /gene="LOC101928198" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:181759116" variation 477..484 /gene="LOC101928198" /replace="aagaa" /replace="aagaagaa" /replace="aagaagaagaa" /db_xref="dbSNP:142588219" variation 482 /gene="LOC101928198" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1212984637" variation 485 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:1399440115" variation 490 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1730662834" variation 496 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:2111107695" variation 501 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1268341657" variation 502 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1229907628" variation 503 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:543989954" variation 508 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:764745305" variation 510 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1054866545" variation 511 /gene="LOC101928198" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1311905561" variation 516 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1353102244" variation 531 /gene="LOC101928198" /replace="a" /replace="g" /db_xref="dbSNP:1730662526" variation 532 /gene="LOC101928198" /replace="c" /replace="t" /db_xref="dbSNP:1581547397" variation 534 /gene="LOC101928198" /replace="a" /replace="c" /db_xref="dbSNP:1730662460" ORIGIN
actgtgaggcctctcacggtgggacccaggctttgggtagctggctccatgctctagcaaagcctcacttagcagtggggaggtcccaagaagagaagcgagatacccatataaagcaagcctgcttagccttccagggtccttcaaatcttaccaaatgaaagccagcttgctccacctactgtcaagccagcatctcattctccccattcttgtctcttaaacaactactcaaaaaaggagagccatgaaagtcaccagcctagaaaattacagtcgacttcatgagcttcatttggatttctcatcatgcaatagcaaagtcacagttattcctactgagatcacaatgatgctgccagagcctcccctgagcttgagagccctcctcttctaagcagcatttggagcatcctccattgtatagtgggaaagtggatatctggctttccttccttcctgaggaaattatgaacaagaagaacaaactccaagctaaatacaagtcacgacttttccagaatccaaaagtaaa
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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