ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2024-04-29 07:56:06, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_026973 698 bp RNA linear PRI 03-SEP-2020
DEFINITION Homo sapiens HLA-F antisense RNA 1 (HLA-F-AS1), transcript variant
2, long non-coding RNA.
ACCESSION NR_026973
VERSION NR_026973.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 698)
AUTHORS Huang Y, Sun H, Ma X, Zeng Y, Pan Y, Yu D, Liu Z and Xiang Y.
TITLE HLA-F-AS1/miR-330-3p/PFN1 axis promotes colorectal cancer
progression
JOURNAL Life Sci. 254, 117180 (2020)
PUBMED 31863778
REFERENCE 2 (bases 1 to 698)
AUTHORS Tao S, Wang Z, Feng J, Hsu FC, Jin G, Kim ST, Zhang Z, Gronberg H,
Zheng LS, Isaacs WB, Xu J and Sun J.
TITLE A genome-wide search for loci interacting with known prostate
cancer risk-associated genetic variants
JOURNAL Carcinogenesis 33 (3), 598-603 (2012)
PUBMED 22219177
REFERENCE 3 (bases 1 to 698)
AUTHORS Barcellos LF, May SL, Ramsay PP, Quach HL, Lane JA, Nititham J,
Noble JA, Taylor KE, Quach DL, Chung SA, Kelly JA, Moser KL,
Behrens TW, Seldin MF, Thomson G, Harley JB, Gaffney PM and
Criswell LA.
TITLE High-density SNP screening of the major histocompatibility complex
in systemic lupus erythematosus demonstrates strong evidence for
independent susceptibility regions
JOURNAL PLoS Genet. 5 (10), e1000696 (2009)
PUBMED 19851445
REMARK GeneRIF: Observational study of gene-disease association. (HuGE
Navigator)
REFERENCE 4 (bases 1 to 698)
AUTHORS De Jager PL, Jia X, Wang J, de Bakker PI, Ottoboni L, Aggarwal NT,
Piccio L, Raychaudhuri S, Tran D, Aubin C, Briskin R, Romano S,
Baranzini SE, McCauley JL, Pericak-Vance MA, Haines JL, Gibson RA,
Naeglin Y, Uitdehaag B, Matthews PM, Kappos L, Polman C, McArdle
WL, Strachan DP, Evans D, Cross AH, Daly MJ, Compston A, Sawcer SJ,
Weiner HL, Hauser SL, Hafler DA and Oksenberg JR.
CONSRTM International MS Genetics Consortium
TITLE Meta-analysis of genome scans and replication identify CD6, IRF8
and TNFRSF1A as new multiple sclerosis susceptibility loci
JOURNAL Nat. Genet. 41 (7), 776-782 (2009)
PUBMED 19525953
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AK092748.1, BM726335.1 and AA868186.1.
Transcript Variant: This variant (2) lacks several internal exons,
compared to variant 1.
##Evidence-Data-START##
Transcript exon combination :: BM726335.1, HY154195.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA1966682, SAMEA2144333
[ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-42 AK092748.1 1-42
43-581 BM726335.1 1-539
582-698 AA868186.1 1-117 c
FEATURES Location/Qualifiers
source 1..698
/organism="Homo sapiens"
/mol_type="transcribed RNA"
/db_xref="taxon:9606"
/chromosome="6"
/map="6p22.1"
gene 1..698
/gene="HLA-F-AS1"
/note="HLA-F antisense RNA 1"
/db_xref="GeneID:285830"
/db_xref="HGNC:HGNC:26645"
ncRNA 1..698
/ncRNA_class="lncRNA"
/gene="HLA-F-AS1"
/product="HLA-F antisense RNA 1, transcript variant 2"
/db_xref="GeneID:285830"
/db_xref="HGNC:HGNC:26645"
exon 1..150
/gene="HLA-F-AS1"
/inference="alignment:Splign:2.1.0"
variation 3
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1254425609"
variation 4
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1232629199"
variation 10
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1778000859"
variation 11
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1778000659"
variation 12..13
/gene="HLA-F-AS1"
/replace="g"
/replace="gg"
/db_xref="dbSNP:1778000459"
variation 22
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:114419664"
variation 25
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1485888292"
variation 29
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1210540542"
variation 30
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1777999511"
variation 31
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1246057462"
variation 34
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1303479728"
variation 35
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:2127613455"
variation 36
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1184041825"
variation 38
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:2127613447"
variation 44
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1777998580"
variation 45
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1036876334"
variation 46
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:972487408"
variation 48..49
/gene="HLA-F-AS1"
/replace="tt"
/replace="ttt"
/db_xref="dbSNP:775561315"
variation 51
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1364490878"
variation 53
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1319682723"
variation 54
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:962537597"
variation 57
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1777996791"
variation 59
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1777996598"
variation 60
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1388636502"
variation 62
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1453977366"
variation 64
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1015027151"
variation 68
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1435487428"
variation 72
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1386705862"
variation 77
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:115897579"
variation 81
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1049527751"
variation 87
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:952289558"
variation 88
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:1311512118"
variation 89
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1777994135"
variation 97
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:1385020750"
variation 99
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1777993789"
variation 102
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1317004797"
variation 104
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1229631447"
variation 105
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1777993251"
variation 107
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1777993022"
variation 110
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:932378801"
variation 114
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1265687570"
variation 115
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:113360778"
variation 116
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:527610000"
variation 118
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1204193144"
variation 119
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1377756916"
variation 120
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:996580882"
variation 121..123
/gene="HLA-F-AS1"
/replace="cc"
/replace="ccc"
/db_xref="dbSNP:765463596"
variation 121
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:2127613339"
variation 122
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1777991303"
variation 123
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1777990866"
variation 124..128
/gene="HLA-F-AS1"
/replace="tttt"
/replace="ttttt"
/db_xref="dbSNP:1777990428"
variation 127
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:1777990667"
variation 133
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1777990218"
variation 134
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:901817980"
variation 139
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:561946120"
variation 142
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1251438967"
variation 146
/gene="HLA-F-AS1"
/replace="t"
/replace="tt"
/db_xref="dbSNP:934787050"
exon 151..689
/gene="HLA-F-AS1"
/inference="alignment:Splign:2.1.0"
variation 152
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1776189701"
variation 154
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1583270183"
variation 156
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:1283733969"
variation 157
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:781610268"
variation 158
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1357941523"
variation 159
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:2127591226"
variation 161
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:893466052"
variation 164
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:755734764"
variation 165
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:553341245"
variation 167
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1020774297"
variation 168
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1013519509"
variation 171
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1313022601"
variation 174
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1776185483"
variation 179
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:376803788"
variation 182
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:756735878"
variation 183
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:372375149"
variation 185
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1386360390"
variation 187
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1157788219"
variation 190
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:536601549"
variation 192
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1426859417"
variation 193
/gene="HLA-F-AS1"
/replace=""
/replace="g"
/db_xref="dbSNP:761841615"
variation 195
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:758244137"
variation 196
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:752475415"
variation 200
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1190898667"
variation 203
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1463966811"
variation 206
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:766518094"
variation 207
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:57486551"
variation 212
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:750494083"
variation 218
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1276778972"
variation 219
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1776177791"
variation 220
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:557722203"
variation 221
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:1044612012"
variation 231
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1343123307"
variation 235
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:111228498"
variation 236
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1436973202"
variation 245
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1359845166"
variation 246
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:775067770"
variation 247
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:769273221"
variation 249
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:763424447"
variation 250
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1374792938"
variation 251
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:571857872"
variation 257..264
/gene="HLA-F-AS1"
/replace="aaaaaaaa"
/replace="aaaaaaaaa"
/db_xref="dbSNP:17875385"
variation 258
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1433782786"
variation 260
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1357059628"
variation 262
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:551676527"
variation 264
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1170927482"
variation 265
/gene="HLA-F-AS1"
/replace=""
/replace="c"
/db_xref="dbSNP:763709122"
variation 271
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1278849021"
variation 274
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1583269445"
variation 275..276
/gene="HLA-F-AS1"
/replace=""
/replace="at"
/db_xref="dbSNP:762436685"
variation 275
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1776168026"
variation 276
/gene="HLA-F-AS1"
/replace="a"
/replace="t"
/db_xref="dbSNP:745582087"
variation 277
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:780676207"
variation 279
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:202177346"
variation 281
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:184987617"
variation 285
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1776165776"
variation 286
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:777697040"
variation 290
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:17875384"
variation 291
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:752469158"
variation 292
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:778725087"
variation 293
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:548431137"
variation 294
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:767849078"
variation 298
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1776163191"
variation 299
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:934278649"
variation 300
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:2127590986"
variation 305
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1479242026"
variation 306
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:762043333"
variation 313
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1776161856"
variation 314
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:372820182"
variation 315
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:764703767"
variation 322
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1370808961"
variation 323
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1776160436"
variation 324
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1309427511"
variation 327
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:529606821"
variation 334
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1776159495"
variation 336
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:775838425"
variation 338
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1776158898"
variation 341
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1165913325"
variation 342
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:770232041"
variation 343
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:759812556"
variation 345..349
/gene="HLA-F-AS1"
/replace="cccc"
/replace="ccccc"
/db_xref="dbSNP:1562295209"
variation 345
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:770508890"
variation 347
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:746523064"
variation 350
/gene="HLA-F-AS1"
/replace="a"
/replace="t"
/db_xref="dbSNP:1254287782"
variation 351
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1401911132"
variation 352
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1776156250"
variation 363
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:2127590885"
variation 368
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1203211448"
variation 386..388
/gene="HLA-F-AS1"
/replace="tt"
/replace="ttt"
/db_xref="dbSNP:879678270"
variation 386..387
/gene="HLA-F-AS1"
/replace="ag"
/replace="tt"
/db_xref="dbSNP:386698422"
variation 386..387
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="tt"
/db_xref="dbSNP:1554227864"
variation 386
/gene="HLA-F-AS1"
/replace="a"
/replace="t"
/db_xref="dbSNP:3734815"
variation 387
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:3734814"
variation 388
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1776152657"
variation 390
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:758336948"
variation 391
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:778687923"
variation 399..400
/gene="HLA-F-AS1"
/replace=""
/replace="ct"
/db_xref="dbSNP:1776151961"
variation 401
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1776151648"
variation 402..406
/gene="HLA-F-AS1"
/replace="agtag"
/replace="agtagtag"
/db_xref="dbSNP:1232181609"
variation 402
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1291306674"
variation 404
/gene="HLA-F-AS1"
/replace="a"
/replace="t"
/db_xref="dbSNP:893695497"
variation 408
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1776149723"
variation 410
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1438348518"
variation 415
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1350494584"
variation 418
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:1776149024"
variation 420
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:754870695"
variation 424
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1389378158"
variation 433..434
/gene="HLA-F-AS1"
/replace="c"
/replace="cc"
/db_xref="dbSNP:2127590812"
variation 433
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1053881619"
variation 434
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:753564853"
variation 439..443
/gene="HLA-F-AS1"
/replace="tgt"
/replace="tgtgt"
/db_xref="dbSNP:1392951635"
variation 441
/gene="HLA-F-AS1"
/replace="a"
/replace="t"
/db_xref="dbSNP:1459751949"
variation 446
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1219528817"
variation 449
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1280305066"
variation 452
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:781579085"
variation 455
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1472963897"
variation 460
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1316215656"
variation 461
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1001857636"
variation 463
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1195290224"
variation 466
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1291237353"
variation 472
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:977548677"
variation 475
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1776142730"
variation 484
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1776142369"
variation 485
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:867238137"
variation 488
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1156412126"
variation 490
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1268567390"
variation 493
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1478342320"
variation 496
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:144568882"
variation 497
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:3734813"
variation 497
/gene="HLA-F-AS1"
/replace="t"
/replace="tggcctgtt"
/db_xref="dbSNP:1776140342"
variation 498..499
/gene="HLA-F-AS1"
/replace=""
/replace="ga"
/replace="gcctgtttga"
/db_xref="dbSNP:1776139108"
variation 498
/gene="HLA-F-AS1"
/replace="g"
/replace="t"
/db_xref="dbSNP:1776139454"
variation 505
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1776138743"
variation 506
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1046176534"
variation 511
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:370001662"
variation 513
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:949075953"
variation 515
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:2127590690"
variation 518
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1776137376"
variation 522
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1233008660"
variation 527..530
/gene="HLA-F-AS1"
/replace="ct"
/replace="ctct"
/db_xref="dbSNP:1776136330"
variation 527
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1776136680"
variation 530
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1776136033"
variation 532
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1474146191"
variation 539
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1020836467"
variation 541
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:917411750"
variation 543
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:896429431"
variation 548
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1033584989"
variation 549
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1776133851"
variation 556
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1364775592"
variation 557
/gene="HLA-F-AS1"
/replace=""
/replace="c"
/db_xref="dbSNP:1776133146"
variation 558
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1047861283"
variation 559
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:764907073"
variation 560
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1280400783"
variation 565
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:929564159"
variation 566
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:761413239"
variation 567
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1002503465"
variation 570
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1359110864"
variation 579
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1214730252"
variation 581
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1227157920"
variation 582
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:544834811"
variation 583
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1776129049"
variation 584
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1038404181"
variation 585
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1219171670"
variation 590
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1776128021"
variation 595
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1776127673"
variation 599
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:572652752"
variation 602
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1444879809"
variation 605
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1776126629"
variation 606
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:113779148"
variation 608
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:2127590535"
variation 610
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1776125985"
variation 611
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:573289257"
variation 612
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/db_xref="dbSNP:1776125237"
variation 623
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1368589605"
variation 624
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:62391801"
variation 627
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1776124070"
variation 631
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:886851020"
variation 633
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1776123346"
variation 635
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1384522486"
variation 638
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:41550620"
variation 640
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1059174"
variation 654
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1021220032"
variation 655
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1009379801"
variation 656
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1335081137"
variation 658
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1776119779"
variation 659
/gene="HLA-F-AS1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1776119405"
variation 665
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1776119090"
variation 668
/gene="HLA-F-AS1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1776118747"
variation 675
/gene="HLA-F-AS1"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1776118267"
variation 679
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:568136717"
variation 682
/gene="HLA-F-AS1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1776116961"
ORIGIN
aggaaatttctggtgggccttcgcggctccgctgggttggcagccgcttgagccactgcgaggaaagcaaagtctgggccatggagatgagcctagtcctgctgttcctgatccgcactgccctttttgcaccccagggagctgctgctgatggtgccaagaacgaagaaggaagctcctgcccctcctaaagccgaagccaaagcgaaggctttgcaaggccaagaaggcagtgttgaaagatgtccacagccacaaaaaaaacaagatccacatgtcacccaccttccggcggcccaagacactgtgactccggaggcagcccaaatatccttggaagagcacccccaggagaaataagcttgaccaccatgttatcatcaagtttccgctgaccactgagtaggctgtgaagaagatagaaaacaacagcctacttgtgttcactgtggatgttaaagccaacaagcaccagatcaaacaggctgtgaagaagtttgtgacattgatgtggccaaagtcaacactctgattcagtctgatggagagaggaaggcatatgttcgactggctcctgactacgatgctttggttgttgccaccaaaattgggatcacctaaactgagtcaagctggctagttccaaatatatgtatatcttttcaccattaaaagaatcttaatctctcaaaaaaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]