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2024-05-01 03:59:33, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_022573               1166 bp    mRNA    linear   PRI 31-DEC-2022
DEFINITION  Homo sapiens testis specific protein Y-linked 2 (TSPY2), mRNA.
ACCESSION   NM_022573
VERSION     NM_022573.4
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Luck K, Kim DK, Lambourne L, Spirohn K, Begg BE, Bian W, Brignall
            R, Cafarelli T, Campos-Laborie FJ, Charloteaux B, Choi D, Cote AG,
            Daley M, Deimling S, Desbuleux A, Dricot A, Gebbia M, Hardy MF,
            Kishore N, Knapp JJ, Kovacs IA, Lemmens I, Mee MW, Mellor JC,
            Pollis C, Pons C, Richardson AD, Schlabach S, Teeking B, Yadav A,
            Babor M, Balcha D, Basha O, Bowman-Colin C, Chin SF, Choi SG,
            Colabella C, Coppin G, D'Amata C, De Ridder D, De Rouck S,
            Duran-Frigola M, Ennajdaoui H, Goebels F, Goehring L, Gopal A,
            Haddad G, Hatchi E, Helmy M, Jacob Y, Kassa Y, Landini S, Li R, van
            Lieshout N, MacWilliams A, Markey D, Paulson JN, Rangarajan S,
            Rasla J, Rayhan A, Rolland T, San-Miguel A, Shen Y, Sheykhkarimli
            D, Sheynkman GM, Simonovsky E, Tasan M, Tejeda A, Tropepe V,
            Twizere JC, Wang Y, Weatheritt RJ, Weile J, Xia Y, Yang X,
            Yeger-Lotem E, Zhong Q, Aloy P, Bader GD, De Las Rivas J, Gaudet S,
            Hao T, Rak J, Tavernier J, Hill DE, Vidal M, Roth FP and Calderwood
            MA.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 1166)
  AUTHORS   Ratti A, Stuppia L, Gatta V, Fogh I, Calabrese G, Pizzuti A and
            Palka G.
  TITLE     Characterization of a new TSPY gene family member in Yq (TSPYq1)
  JOURNAL   Cytogenet Cell Genet 88 (1-2), 159-162 (2000)
   PUBMED   10773691
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC006335.2.
            
            On Dec 30, 2020 this sequence version replaced NM_022573.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK307425.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000320701.9/ ENSP00000314077.4
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-532               AC006335.2         10324-10855
            533-610             AC006335.2         11457-11534
            611-722             AC006335.2         11663-11774
            723-868             AC006335.2         11876-12021
            869-950             AC006335.2         12128-12209
            951-1166            AC006335.2         12904-13119
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="Y"
                     /map="Yp11.2"
     gene            1..1166
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /note="testis specific protein Y-linked 2"
                     /db_xref="GeneID:64591"
                     /db_xref="HGNC:HGNC:23924"
     exon            1..532
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /inference="alignment:Splign:2.1.0"
     variation       3
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace=""
                     /replace="c"
                     /db_xref="dbSNP:759713067"
     variation       4
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1404079424"
     variation       18..20
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="ccc"
                     /replace="cccc"
                     /db_xref="dbSNP:1162145295"
     variation       20
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1355738209"
     variation       21
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:754865271"
     variation       24..28
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="ggggg"
                     /replace="gggggg"
                     /db_xref="dbSNP:765511988"
     variation       26
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1348409621"
     variation       30
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:778789374"
     variation       32
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:2053860176"
     variation       38
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:747982594"
     variation       39
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:758202829"
     variation       40
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:781339283"
     variation       41
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1226514848"
     variation       42
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:746039520"
     variation       44
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1308113141"
     CDS             47..973
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /note="testis-specific Y-encoded protein Q1"
                     /codon_start=1
                     /product="testis-specific Y-encoded protein 2"
                     /protein_id="NP_072095.2"
                     /db_xref="CCDS:CCDS35465.1"
                     /db_xref="GeneID:64591"
                     /db_xref="HGNC:HGNC:23924"
                     /translation="
MRPEGSLTYRVPERLRQGSCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS"
     misc_feature    422..910
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /note="Nucleosome assembly protein (NAP); Region: NAP;
                     cl08298"
                     /db_xref="CDD:447601"
     variation       51
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:769780868"
     variation       52
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:775663160"
     variation       54
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:749845353"
     variation       58
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:1189163821"
     variation       59
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:769328393"
     variation       63
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1472117203"
     variation       70
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:774978220"
     variation       73
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1602996353"
     variation       74
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:762333216"
     variation       77
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1409980208"
     variation       81
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:767853882"
     variation       83
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:772752542"
     variation       87
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:760325274"
     variation       88
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1313315312"
     variation       89
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:1569356229"
     variation       92
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2053860836"
     variation       93
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1339622459"
     variation       102
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1445777547"
     variation       110
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1271808876"
     variation       117
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:765832868"
     variation       119
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1227850351"
     variation       120
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2124033004"
     variation       123
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2053861024"
     variation       124
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1295479292"
     variation       128
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:753382316"
     variation       141
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:1211825972"
     variation       149
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:879191568"
     variation       160
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1440999539"
     variation       165
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:1218568948"
     variation       174
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1243129373"
     variation       181
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1449394173"
     variation       184
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1187454926"
     variation       197
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1387764602"
     variation       224
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1455338610"
     variation       258..284
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="tggcggaggtggaggtggtggcggagg"
                     /replace="tggcggaggtggaggtggtggcggaggtggaggtggtggcggagg"
                     /db_xref="dbSNP:1173833231"
     variation       267
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1602996407"
     variation       280
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1401261212"
     variation       284
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:1412485967"
     variation       298
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1569356269"
     variation       300
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201475959"
     variation       303
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1556038038"
     variation       305
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:1602996421"
     variation       334
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:1602996426"
     variation       370
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1602996430"
     variation       372
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1345774443"
     variation       382
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1434249213"
     variation       383
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:1318664248"
     variation       397
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1373233344"
     variation       417
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1235324462"
     variation       425
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1274422620"
     variation       437
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:1556038048"
     variation       438
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:765215141"
     variation       442
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:1225903910"
     variation       447
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:752629587"
     variation       453
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:758136878"
     variation       460
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:777571248"
     variation       468
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1245702473"
     variation       469
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:1469382335"
     variation       478
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:750633057"
     variation       483
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1376651301"
     variation       485
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1556038064"
     variation       493
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:756320520"
     variation       496
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:780393699"
     variation       507..509
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="gcg"
                     /db_xref="dbSNP:753130956"
     variation       507
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1456667841"
     variation       516
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:768850301"
     variation       519
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1569356324"
     variation       525
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:1396799660"
     variation       527
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:779566633"
     variation       528
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:748630006"
     variation       529
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:772345074"
     exon            533..610
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /inference="alignment:Splign:2.1.0"
     variation       539
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:752647910"
     variation       545
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1458337988"
     variation       571
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1162794549"
     variation       572
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:763827329"
     variation       584
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:751412552"
     variation       598
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:756980852"
     exon            611..722
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /inference="alignment:Splign:2.1.0"
     variation       611
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:771277609"
     variation       614
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:776272126"
     variation       615
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:3893640"
     variation       619
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:769320679"
     variation       622
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:879124149"
     variation       626
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:775025974"
     variation       627
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:762339126"
     variation       629
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace=""
                     /replace="c"
                     /db_xref="dbSNP:1424371037"
     variation       629
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:764142471"
     variation       630
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:3876328"
     variation       632
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:761671869"
     variation       636
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:767361972"
     variation       637
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:754134309"
     variation       641
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:755210630"
     variation       649
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:765520155"
     variation       650
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:752867873"
     variation       658
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:758391161"
     variation       662
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:778408411"
     variation       663
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:747410560"
     variation       666
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:757635172"
     variation       670
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:781492056"
     variation       671
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:769476323"
     variation       679..680
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="cc"
                     /db_xref="dbSNP:763350007"
     variation       688
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:774985468"
     variation       692
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:748889251"
     variation       699
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:768048592"
     variation       703
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:774357997"
     exon            723..868
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /inference="alignment:Splign:2.1.0"
     variation       750
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1428039424"
     variation       757
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1556038166"
     variation       770
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:1315229974"
     variation       781
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:1403307373"
     variation       785
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1395980346"
     variation       822
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1311129230"
     variation       826
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1338193090"
     variation       829
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1229059379"
     variation       836
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1297675725"
     variation       852
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1556038180"
     exon            869..950
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /inference="alignment:Splign:2.1.0"
     variation       884
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1199817483"
     variation       890
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1602996814"
     variation       909
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1253912433"
     variation       945
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1602996821"
     variation       946
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1556038189"
     exon            951..1166
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /inference="alignment:Splign:2.1.0"
     variation       952
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1602996853"
     variation       957
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1556038199"
     variation       968
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:2053865281"
     variation       983
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:2053865312"
     variation       990
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:1267706803"
     variation       1003
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1602996862"
     variation       1004
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1430236721"
     variation       1009
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1189361916"
     variation       1012..1016
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="ct"
                     /replace="ctcct"
                     /db_xref="dbSNP:2053865415"
     variation       1019
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1389597630"
     variation       1031
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:2053865456"
     variation       1036
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2053865473"
     variation       1042
                     /gene="TSPY2"
                     /gene_synonym="TSPYQ1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:4027969"
ORIGIN      
ggctcttcgcgcgcagtcccttagggggcgcctggaagcccggcgcatgcgccctgagggctcgctgacctaccgggtgccagagaggctgcggcagggttcctgtggcgtgggtcgggcagcacaggccttggtgtgtgcgagtgccaaggagggcaccgccttcaggatggaggctgtgcaggagggggcggccggggtggagagtgagcaggcggctttgggggaggaggcggtgctgctgttggatgacataatggcggaggtggaggtggtggcggaggaggagggcctcgtggagcggcgggaggaggcccagcgggcacagcaggctgtgcctggccctgggcccatgaccccagagtctgcactggaggagctgctggccgttcaggtggagctggagccggttaatgcccaagccaggaaggccttttctcggcagcgggaaaagatggagcggaggcgcaagccccacctagaccgcagaggcgccgtcatccagagcgtccctggcttctgggccaatgttattgcaaaccacccccagatgtcagccctgatcactgacgaagatgaagacatgctgagctacatggtcagcctggaggtggaagaagagaagcatcgtgttcatctctgcaagatcatgttgttctttcggagtaacccctacttccagaataaagtgattaccaaggaatatctggtgaacatcacagaatacagggcttctcattccactccaattgagtggtatccggattatgaagtggaggcctatcgccgcagacaccacaacagcagccttaacttcttcaactggttctctgaccacaacttcgcaggatctaacaagattgctgagatcctatgtaaggacctgtggcgcaatcccctgcaatactacaagaggatgaagccacctgaagagggaacagagacgtcaggggactcccagttgttgagttgaatatgatggagcatcagattttacctaatacagcagaactcctaaaaagttacagccatatgcaggacagcagtactcagcatggtcttatgcacaggaactaaaggaaaaagagatcgagtcacaaaaattcaggaagagggggtaaatgtggattgtatggaatgaaaaataaacattctcaaggatgtgt
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]