2024-05-08 15:14:25, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_021104 561 bp mRNA linear PRI 02-JUL-2023 DEFINITION Homo sapiens ribosomal protein L41 (RPL41), transcript variant 1, mRNA. ACCESSION NM_021104 VERSION NM_021104.2 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 561) AUTHORS Geng W, Ren J, Shi H, Qin F, Xu X, Xiao S, Jiao Y and Wang A. TITLE RPL41 sensitizes retinoblastoma cells to chemotherapeutic drugs via ATF4 degradation JOURNAL J Cell Physiol 236 (3), 2214-2225 (2021) PUBMED 32783256 REMARK GeneRIF: RPL41 sensitizes retinoblastoma cells to chemotherapeutic drugs via ATF4 degradation. REFERENCE 2 (bases 1 to 561) AUTHORS Luck K, Kim DK, Lambourne L, Spirohn K, Begg BE, Bian W, Brignall R, Cafarelli T, Campos-Laborie FJ, Charloteaux B, Choi D, Cote AG, Daley M, Deimling S, Desbuleux A, Dricot A, Gebbia M, Hardy MF, Kishore N, Knapp JJ, Kovacs IA, Lemmens I, Mee MW, Mellor JC, Pollis C, Pons C, Richardson AD, Schlabach S, Teeking B, Yadav A, Babor M, Balcha D, Basha O, Bowman-Colin C, Chin SF, Choi SG, Colabella C, Coppin G, D'Amata C, De Ridder D, De Rouck S, Duran-Frigola M, Ennajdaoui H, Goebels F, Goehring L, Gopal A, Haddad G, Hatchi E, Helmy M, Jacob Y, Kassa Y, Landini S, Li R, van Lieshout N, MacWilliams A, Markey D, Paulson JN, Rangarajan S, Rasla J, Rayhan A, Rolland T, San-Miguel A, Shen Y, Sheykhkarimli D, Sheynkman GM, Simonovsky E, Tasan M, Tejeda A, Tropepe V, Twizere JC, Wang Y, Weatheritt RJ, Weile J, Xia Y, Yang X, Yeger-Lotem E, Zhong Q, Aloy P, Bader GD, De Las Rivas J, Gaudet S, Hao T, Rak J, Tavernier J, Hill DE, Vidal M, Roth FP and Calderwood MA. TITLE A reference map of the human binary protein interactome JOURNAL Nature 580 (7803), 402-408 (2020) PUBMED 32296183 REFERENCE 3 (bases 1 to 561) AUTHORS Yang G and Zong H. TITLE Overexpression of PDZK1IP1, EEF1A2 and RPL41 genes in intrahepatic cholangiocarcinoma JOURNAL Mol Med Rep 13 (6), 4786-4790 (2016) PUBMED 27082702 REMARK GeneRIF: Differential gene expression analysis demonstrated significant upregulation of PDZK1IP1, EEF1A2 and RPL41 (ENSG00000279483) genes in the intrahepatic cholangiocarcinoma samples when compared with the matched paratumor samples. REFERENCE 4 (bases 1 to 561) AUTHORS Behrmann E, Loerke J, Budkevich TV, Yamamoto K, Schmidt A, Penczek PA, Vos MR, Burger J, Mielke T, Scheerer P and Spahn CM. TITLE Structural snapshots of actively translating human ribosomes JOURNAL Cell 161 (4), 845-857 (2015) PUBMED 25957688 REFERENCE 5 (bases 1 to 561) AUTHORS Khatter H, Myasnikov AG, Natchiar SK and Klaholz BP. TITLE Structure of the human 80S ribosome JOURNAL Nature 520 (7549), 640-645 (2015) PUBMED 25901680 REFERENCE 6 (bases 1 to 561) AUTHORS Go H, Miyado K and Taniguchi S. TITLE Genomic structure of the human ribosomal protein L41 gene JOURNAL Biochem Mol Biol Int 46 (6), 1227-1231 (1998) PUBMED 9891856 REFERENCE 7 (bases 1 to 561) AUTHORS Kenmochi N, Kawaguchi T, Rozen S, Davis E, Goodman N, Hudson TJ, Tanaka T and Page DC. TITLE A map of 75 human ribosomal protein genes JOURNAL Genome Res 8 (5), 509-523 (1998) PUBMED 9582194 REFERENCE 8 (bases 1 to 561) AUTHORS Lee JH, Kim JM, Kim MS, Lee YT, Marshak DR and Bae YS. TITLE The highly basic ribosomal protein L41 interacts with the beta subunit of protein kinase CKII and stimulates phosphorylation of DNA topoisomerase IIalpha by CKII JOURNAL Biochem Biophys Res Commun 238 (2), 462-467 (1997) PUBMED 9299532 REFERENCE 9 (bases 1 to 561) AUTHORS Wool IG, Chan YL and Gluck A. TITLE Structure and evolution of mammalian ribosomal proteins JOURNAL Biochem Cell Biol 73 (11-12), 933-947 (1995) PUBMED 8722009 REMARK Review article REFERENCE 10 (bases 1 to 561) AUTHORS Klaudiny J, von der Kammer H and Scheit KH. TITLE Characterization by cDNA cloning of the mRNA of a highly basic human protein homologous to the yeast ribosomal protein YL41 JOURNAL Biochem Biophys Res Commun 187 (2), 901-906 (1992) PUBMED 1326959 COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff in collaboration with Francesco Amaldi. The reference sequence was derived from Z12962.1 and AC034102.32. On May 31, 2019 this sequence version replaced NM_021104.1. Summary: Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein, which shares sequence similarity with the yeast ribosomal protein YL41, belongs to the L41E family of ribosomal proteins. It is located in the cytoplasm. The protein can interact with the beta subunit of protein kinase CKII and can stimulate the phosphorylation of DNA topoisomerase II-alpha by CKII. Two alternative splice variants have been identified, both encoding the same protein. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]. Transcript Variant: This variant (1) represents the predominant transcript. Variants 1 and 2 encode the same protein. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BM830448.1, BM765079.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-426 Z12962.1 44-469 427-561 AC034102.32 43332-43466 c FEATURES Location/Qualifiers source 1..561 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="12" /map="12q13.2" gene 1..561 /gene="RPL41" /gene_synonym="eL41; L41" /note="ribosomal protein L41" /db_xref="GeneID:6171" /db_xref="HGNC:HGNC:10354" /db_xref="MIM:613315" exon 1..27 /gene="RPL41" /gene_synonym="eL41; L41" /inference="alignment:Splign:2.1.0" misc_feature 1 /gene="RPL41" /gene_synonym="eL41; L41" /note="predominant transcription initiation site" variation 1 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:562553476" variation 2 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:760065071" variation 3 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:555391078" variation 4 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869602679" variation 5..8 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="cggc" /db_xref="dbSNP:1198652177" variation 5 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:903002806" variation 7 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:532862802" variation 8 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1277136308" variation 9 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1032835690" variation 10 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869603510" misc_feature 11..13 /gene="RPL41" /gene_synonym="eL41; L41" /note="upstream in-frame stop codon" variation 12 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:892878246" variation 13 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869603771" variation 14 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1869603856" variation 15 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1362465603" variation 17 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1381297790" variation 18 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:765683979" variation 19 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="t" /db_xref="dbSNP:1592238222" variation 20 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="t" /db_xref="dbSNP:1869604512" variation 21 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:996648064" variation 22 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1399837131" variation 23 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1028366836" variation 24 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:551486916" variation 25 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869605236" variation 26 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1592238231" variation 27 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:1869605449" exon 28..52 /gene="RPL41" /gene_synonym="eL41; L41" /inference="alignment:Splign:2.1.0" variation 28..31 /gene="RPL41" /gene_synonym="eL41; L41" /replace="" /replace="aaac" /db_xref="dbSNP:1869614775" variation 31 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869614889" variation 32 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1285907579" variation 37 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1869615086" variation 38 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869615193" variation 40 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:374904805" CDS 41..118 /gene="RPL41" /gene_synonym="eL41; L41" /note="60S ribosomal protein L41; homologue of yeast ribosomal protein YL41; HG12 protein" /codon_start=1 /product="large ribosomal subunit protein eL41" /protein_id="NP_066927.1" /db_xref="CCDS:CCDS44919.1" /db_xref="GeneID:6171" /db_xref="HGNC:HGNC:10354" /db_xref="MIM:613315" /translation="
MRAKWRKKRMRRLKRKRRKMRQRSK"
misc_feature 41..115 /gene="RPL41" /gene_synonym="eL41; L41" /note="propagated from UniProtKB/Swiss-Prot (P62945.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 41..112 /gene="RPL41" /gene_synonym="eL41; L41" /note="Ribosomal protein L41; Region: Ribosomal_L41; pfam05162" /db_xref="CDD:428342" variation 41 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869615443" variation 47 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1227641220" variation 49 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1258521100" variation 51 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869615857" exon 53..75 /gene="RPL41" /gene_synonym="eL41; L41" /inference="alignment:Splign:2.1.0" variation 55 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:750687265" variation 56 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1592238571" variation 58 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:756514713" variation 61 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1288742261" variation 67 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:780092588" variation 69 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:371635838" variation 71 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:749544631" variation 74 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:755027524" variation 75 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1171021945" exon 76..561 /gene="RPL41" /gene_synonym="eL41; L41" /inference="alignment:Splign:2.1.0" variation 79 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1310875762" variation 84 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:866843250" variation 90 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:764828764" variation 93 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:13283" variation 97 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1240144036" variation 100 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1335404974" variation 104 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869653759" variation 112 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1266489717" variation 114 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869653992" variation 115 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:775211037" variation 119 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:762558153" variation 122 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1267073419" variation 125 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1363789835" variation 126 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:1458424195" variation 127 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:767854248" variation 128..129 /gene="RPL41" /gene_synonym="eL41; L41" /replace="tt" /replace="ttt" /db_xref="dbSNP:1301260872" variation 133 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="gg" /db_xref="dbSNP:1366063143" variation 134 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:1592238763" variation 137 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1265091204" variation 138 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1236507678" variation 143 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:529277961" variation 149 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869656135" variation 151 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1158304643" variation 152 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:1198695839" variation 154 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:187497064" variation 155 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:907882240" variation 160 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869656743" variation 161 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:906718215" variation 162 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:555977573" variation 166 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869657103" variation 169..170 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="cc" /db_xref="dbSNP:1221023921" variation 171 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1490664916" variation 173 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869657413" variation 175 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1348516660" variation 176 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1210154393" variation 177 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1592238789" variation 178..181 /gene="RPL41" /gene_synonym="eL41; L41" /replace="gggg" /replace="ggggg" /db_xref="dbSNP:1869657866" variation 179 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869657967" variation 182 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869658082" variation 183 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869658183" variation 184 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1277924942" variation 187 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:999536490" variation 190 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1869658521" variation 191 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:1031061196" variation 197 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1280427314" variation 203 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1448563885" variation 205 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1193429638" variation 212 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:944677251" variation 213 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1282757357" variation 222 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:1869659322" variation 224 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1040476800" variation 228 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1346077466" variation 229 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="t" /db_xref="dbSNP:1325426763" variation 231..232 /gene="RPL41" /gene_synonym="eL41; L41" /replace="" /replace="aa" /db_xref="dbSNP:1398800381" variation 232 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:376833166" variation 234 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1158832127" variation 238 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:574317207" variation 239 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869660668" variation 240 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:1050053264" variation 242 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1198071629" variation 244 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:904348671" variation 246 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="t" /db_xref="dbSNP:13799" variation 247 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:1869661244" variation 251 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1191659547" variation 254 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1446827309" variation 255 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869661458" variation 259 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1435877887" variation 261 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1031558113" variation 262 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1029449314" variation 264 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:953949668" variation 265 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1210923548" variation 268 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:985791743" variation 270 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1262676937" variation 274 /gene="RPL41" /gene_synonym="eL41; L41" /replace="t" /replace="tt" /db_xref="dbSNP:1173604004" variation 275 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869662774" variation 278..280 /gene="RPL41" /gene_synonym="eL41; L41" /replace="" /replace="acc" /db_xref="dbSNP:573142473" variation 279 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:891479385" variation 282 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:1869663102" variation 283 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1592238864" variation 285..286 /gene="RPL41" /gene_synonym="eL41; L41" /replace="t" /replace="tt" /db_xref="dbSNP:1869663333" variation 288 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1013904574" variation 290 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:912371469" variation 291 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:2136851120" variation 294 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869663656" variation 300 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1318761532" variation 302 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:943871031" variation 303 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869663975" variation 306 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:1592238877" variation 309 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869664183" variation 310 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:972584989" variation 311..312 /gene="RPL41" /gene_synonym="eL41; L41" /replace="gg" /replace="ggg" /db_xref="dbSNP:1869664386" variation 314 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:970239081" variation 315 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869664635" variation 319 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869664732" variation 320 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869664803" variation 322 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1319178732" variation 327 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869665036" variation 332 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1869665147" variation 334 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869665256" variation 336 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:2371352" variation 338 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:918328150" variation 341 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:1869665560" variation 342 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1344831934" variation 343 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869665775" variation 345 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869665869" variation 349 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:1166712704" variation 350 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1432913196" variation 351 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:1869666096" variation 352..356 /gene="RPL41" /gene_synonym="eL41; L41" /replace="t" /replace="tgttt" /db_xref="dbSNP:1869666203" variation 353 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869666316" variation 354..360 /gene="RPL41" /gene_synonym="eL41; L41" /replace="ttt" /replace="tttattt" /db_xref="dbSNP:1869666425" variation 356 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="t" /db_xref="dbSNP:1475389486" variation 357 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:1243163167" variation 358 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1190917604" variation 362 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869666751" variation 366 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:569225203" variation 367 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:556834319" variation 369 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1371908975" variation 371 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869667238" variation 372 /gene="RPL41" /gene_synonym="eL41; L41" /replace="t" /replace="tt" /db_xref="dbSNP:1242834457" variation 375 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:1204510596" variation 378 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:1869667553" variation 384..390 /gene="RPL41" /gene_synonym="eL41; L41" /replace="aat" /replace="aataaat" /db_xref="dbSNP:1314066278" variation 390 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869667786" variation 391 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1270993728" variation 393 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1214020926" variation 394..397 /gene="RPL41" /gene_synonym="eL41; L41" /replace="ct" /replace="ctct" /db_xref="dbSNP:1233438303" variation 394 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1048054975" variation 396 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:894805756" variation 399..400 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="cc" /db_xref="dbSNP:1298171110" variation 399 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:1230411820" variation 400 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:4016501" variation 401..413 /gene="RPL41" /gene_synonym="eL41; L41" /replace="gctg" /replace="gctgttttagctg" /db_xref="dbSNP:1869668868" variation 401 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:948295715" variation 404 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:4016502" variation 407 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869669176" variation 408 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1047099998" variation 412 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="t" /db_xref="dbSNP:1452887493" variation 413..418 /gene="RPL41" /gene_synonym="eL41; L41" /replace="gaa" /replace="gaagaa" /db_xref="dbSNP:1739822948" variation 417 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:1869669362" regulatory 418..423 /regulatory_class="polyA_signal_sequence" /gene="RPL41" /gene_synonym="eL41; L41" /note="hexamer: ATTAAA" variation 418 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:952173579" variation 421..423 /gene="RPL41" /gene_synonym="eL41; L41" /replace="aaa" /replace="aaaaa" /db_xref="dbSNP:1869669570" variation 423 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869669664" variation 424 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="t" /db_xref="dbSNP:1592238931" variation 425 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1326320648" polyA_site 426 /gene="RPL41" /gene_synonym="eL41; L41" /note="major polyA site" variation 428 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1205536593" variation 430 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869670111" variation 432 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1283037722" variation 433 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869670303" variation 434..436 /gene="RPL41" /gene_synonym="eL41; L41" /replace="t" /replace="tat" /db_xref="dbSNP:752600610" variation 435 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:908107591" variation 436..445 /gene="RPL41" /gene_synonym="eL41; L41" /replace="tt" /replace="ttatgttttt" /db_xref="dbSNP:2136851328" variation 436 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1215248920" variation 439 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:944729696" variation 442 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:538339877" variation 444 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869670876" variation 445 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869670951" variation 447 /gene="RPL41" /gene_synonym="eL41; L41" /replace="" /replace="a" /db_xref="dbSNP:1184536052" variation 448 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869671120" variation 450 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1565867593" variation 453..454 /gene="RPL41" /gene_synonym="eL41; L41" /replace="cc" /replace="ccc" /db_xref="dbSNP:35934945" variation 454 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:2136851361" variation 457 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869671299" variation 458 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:577517731" variation 459 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869671533" variation 463 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:976514712" variation 464 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869671680" variation 465 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1869671797" variation 466 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:373838431" variation 467 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1453318319" variation 470 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:2136851386" variation 472 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="t" /db_xref="dbSNP:1869672055" variation 474..475 /gene="RPL41" /gene_synonym="eL41; L41" /replace="" /replace="tc" /db_xref="dbSNP:2136851396" variation 474 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1438451221" variation 476..479 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="atta" /db_xref="dbSNP:760637102" variation 479..482 /gene="RPL41" /gene_synonym="eL41; L41" /replace="ag" /replace="agag" /db_xref="dbSNP:1869672448" variation 479 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="aa" /db_xref="dbSNP:1193504710" variation 481 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:867148871" variation 483 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:906684071" variation 486 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:932093125" variation 487 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:2136851422" variation 488 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:999627940" variation 490 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1380901187" variation 494 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:1869673164" variation 495..500 /gene="RPL41" /gene_synonym="eL41; L41" /replace="ctacct" /replace="ctacctacct" /db_xref="dbSNP:1869673353" variation 495 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /db_xref="dbSNP:1031155838" variation 496 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:935790340" variation 501 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:1370600382" variation 504 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:544997843" variation 505..507 /gene="RPL41" /gene_synonym="eL41; L41" /replace="tat" /replace="tatat" /db_xref="dbSNP:1869673767" variation 506 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1423314121" variation 507 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869673932" variation 511..513 /gene="RPL41" /gene_synonym="eL41; L41" /replace="gg" /replace="ggg" /replace="gggg" /db_xref="dbSNP:1365457795" variation 513 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1164612935" variation 514 /gene="RPL41" /gene_synonym="eL41; L41" /replace="g" /replace="t" /db_xref="dbSNP:1592238959" variation 515 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1869674360" variation 517 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:559756685" polyA_site 520 /gene="RPL41" /gene_synonym="eL41; L41" regulatory 523..528 /regulatory_class="polyA_signal_sequence" /gene="RPL41" /gene_synonym="eL41; L41" /note="hexamer: TATAAA" variation 524 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1053041753" variation 531 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:893882798" variation 534 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1470577188" variation 535 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1869674829" variation 536 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1011412739" variation 538 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1220286800" variation 542 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="g" /db_xref="dbSNP:1014158662" variation 544 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1290866576" variation 545 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1024422715" variation 546 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1869676455" variation 548 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1028961905" variation 551 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:905523075" variation 552 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:1222825042" variation 553 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1001692193" variation 560 /gene="RPL41" /gene_synonym="eL41; L41" /replace="c" /replace="t" /db_xref="dbSNP:1455842731" polyA_site 561 /gene="RPL41" /gene_synonym="eL41; L41" variation 561 /gene="RPL41" /gene_synonym="eL41; L41" /replace="a" /replace="g" /db_xref="dbSNP:953518939" ORIGIN
ctctcggccttagcgccatttttttggaaacctctgcgccatgagagccaagtggaggaagaagcgaatgcgcaggctgaagcgcaaaagaagaaagatgaggcagaggtccaagtaaaccgctagcttgttgcaccgtggaggccacaggagcagaaacatggaatgccagacgctggggatgctggtacaagttgtgggactgcatgctactgtctagagcttgtctcaatggatctagaacttcatcgccctctgatcgccgatcacctctgagacccaccttgctcataaacaaaatgcccatgttggtcctctgccctggacctgtgacattctggactatttctgtgtttatttgtggccgagtgtaacaaccatataataaatcacctcttccgctgttttagctgaagaattaaatcatcttgtctattatgttttttatggttccatcgggtgggggttttctgtcattagagtttgccctgtcactacctgtgctatggagggtatcaaagctataaaggcaacagcccgggttacgtggtgtggtttgca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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