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Previous release (v1)
2024-05-04 04:21:51, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_005954 406 bp mRNA linear PRI 10-APR-2023
DEFINITION Homo sapiens metallothionein 3 (MT3), mRNA.
ACCESSION NM_005954
VERSION NM_005954.4
KEYWORDS RefSeq; MANE Select.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 406)
AUTHORS Yuan AT, Korkola NC and Stillman MJ.
TITLE Apo-metallothionein-3 cooperatively forms tightly compact
structures under physiological conditions
JOURNAL J Biol Chem 299 (3), 102899 (2023)
PUBMED 36639030
REMARK GeneRIF: Apo-metallothionein-3 cooperatively forms tightly compact
structures under physiological conditions.
REFERENCE 2 (bases 1 to 406)
AUTHORS Kalyan G, Slusser-Nore A, Dunlevy JR, Bathula CS, Shabb JB, Muhonen
W, Somji S, Sens DA and Garrett SH.
TITLE Protein interactions with metallothionein-3 promote vectorial
active transport in human proximal tubular cells
JOURNAL PLoS One 17 (5), e0267599 (2022)
PUBMED 35503771
REMARK GeneRIF: Protein interactions with metallothionein-3 promote
vectorial active transport in human proximal tubular cells.
Publication Status: Online-Only
REFERENCE 3 (bases 1 to 406)
AUTHORS Rodrigo MAM, Michalkova H, Strmiska V, Casar B, Crespo P, de Los
Rios V, Ignacio Casal J, Haddad Y, Guran R, Eckschlager T, Pokorna
P, Heger Z and Adam V.
TITLE Metallothionein-3 promotes cisplatin chemoresistance remodelling in
neuroblastoma
JOURNAL Sci Rep 11 (1), 5496 (2021)
PUBMED 33750814
REMARK GeneRIF: Metallothionein-3 promotes cisplatin chemoresistance
remodelling in neuroblastoma.
Publication Status: Online-Only
REFERENCE 4 (bases 1 to 406)
AUTHORS Vasak M and Meloni G.
TITLE Mammalian Metallothionein-3: New Functional and Structural Insights
JOURNAL Int J Mol Sci 18 (6), 1117 (2017)
PUBMED 28538697
REMARK GeneRIF: In recent years, the roles of zinc dynamics and MT3
function in neurodegeneration are slowly emerging. This short
review focuses on the recent developments regarding the chemistry
and biology of MT3. [review]
Review article
Publication Status: Online-Only
REFERENCE 5 (bases 1 to 406)
AUTHORS Aschner M.
TITLE The functional significance of brain metallothioneins
JOURNAL FASEB J 10 (10), 1129-1136 (1996)
PUBMED 8751715
REMARK Review article
REFERENCE 6 (bases 1 to 406)
AUTHORS Amoureux MC, Wurch T and Pauwels PJ.
TITLE Modulation of metallothionein-III mRNA content and growth rate of
rat C6-glial cells by transfection with human 5-HT1D receptor genes
JOURNAL Biochem Biophys Res Commun 214 (2), 639-645 (1995)
PUBMED 7677777
REFERENCE 7 (bases 1 to 406)
AUTHORS Naruse S, Igarashi S, Furuya T, Kobayashi H, Miyatake T and Tsuji
S.
TITLE Structures of the human and mouse growth inhibitory factor-encoding
genes
JOURNAL Gene 144 (2), 283-287 (1994)
PUBMED 8039715
REFERENCE 8 (bases 1 to 406)
AUTHORS Tsuji S, Kobayashi H, Uchida Y, Ihara Y and Miyatake T.
TITLE Molecular cloning of human growth inhibitory factor cDNA and its
down-regulation in Alzheimer's disease
JOURNAL EMBO J 11 (13), 4843-4850 (1992)
PUBMED 1464312
REFERENCE 9 (bases 1 to 406)
AUTHORS Palmiter RD, Findley SD, Whitmore TE and Durnam DM.
TITLE MT-III, a brain-specific member of the metallothionein gene family
JOURNAL Proc Natl Acad Sci U S A 89 (14), 6333-6337 (1992)
PUBMED 1631128
REFERENCE 10 (bases 1 to 406)
AUTHORS Uchida Y, Takio K, Titani K, Ihara Y and Tomonaga M.
TITLE The growth inhibitory factor that is deficient in the Alzheimer's
disease brain is a 68 amino acid metallothionein-like protein
JOURNAL Neuron 7 (2), 337-347 (1991)
PUBMED 1873033
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from BP210917.1 and CB155600.1.
On Jun 2, 2019 this sequence version replaced NM_005954.3.
Summary: This gene is a member of the metallothionein family of
genes. Proteins encoded by this gene family are low in molecular
weight, are cysteine-rich, lack aromatic residues, and bind
divalent heavy metal ions. This gene family member displays
tissue-specific expression, and contains a threonine insert near
its N-terminus and a glutamate-rich hexapeptide insert near its
C-terminus relative to the proteins encoded by other gene family
members. It plays an important role in zinc and copper homeostasis,
and is induced under hypoxic conditions. The encoded protein is a
growth inhibitory factor, and reduced levels of the protein are
observed in the brains of individuals with some metal-linked
neurodegenerative disorders such as Alzheimer's disease. [provided
by RefSeq, Sep 2017].
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BP211991.1, CK001163.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA1966682, SAMEA1968540
[ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
MANE Ensembl match :: ENST00000200691.5/ ENSP00000200691.5
RefSeq Select criteria :: based on single protein-coding transcript
##RefSeq-Attributes-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-405 BP210917.1 161-565
406-406 CB155600.1 437-437
FEATURES Location/Qualifiers
source 1..406
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="16"
/map="16q13"
gene 1..406
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/note="metallothionein 3"
/db_xref="GeneID:4504"
/db_xref="HGNC:HGNC:7408"
/db_xref="MIM:139255"
exon 1..94
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/inference="alignment:Splign:2.1.0"
variation 1
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:1419466472"
variation 2
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959794098"
variation 3
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1461893103"
variation 4
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:1959794177"
variation 5
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:760137007"
variation 6
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:765484622"
variation 8
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1567334487"
variation 9
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:753170471"
variation 9
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="cc"
/db_xref="dbSNP:770622388"
variation 10
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1363056132"
variation 12
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:756841829"
variation 13
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1247386538"
variation 14
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:781000891"
variation 15
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:755721409"
variation 19
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:1959794620"
variation 20
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:969050945"
variation 21
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:780093277"
variation 23
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:749161533"
variation 24
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959794774"
variation 26
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:754984330"
variation 28
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1351128675"
variation 29..31
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="cc"
/replace="ccc"
/db_xref="dbSNP:1325911664"
variation 30
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:778569590"
variation 31
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:748033231"
variation 35
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:773452940"
variation 36
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:200460196"
variation 37
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1261735122"
variation 38
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1959795170"
variation 39
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959795202"
variation 41
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:747041781"
variation 43
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:1597053780"
variation 47
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:1959795315"
variation 49
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:770974726"
variation 51
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1959795396"
variation 52
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959795425"
variation 53
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:776730360"
variation 54
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:759953895"
variation 56
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:2144276762"
variation 60
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:376911485"
variation 61
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:775654833"
variation 62
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="t"
/db_xref="dbSNP:1959795588"
variation 63
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:1032007443"
CDS 64..270
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/note="metallothionein 3 (growth inhibitory factor
(neurotrophic)); metallothionein-III"
/codon_start=1
/product="metallothionein-3"
/protein_id="NP_005945.1"
/db_xref="CCDS:CCDS10762.1"
/db_xref="GeneID:4504"
/db_xref="HGNC:HGNC:7408"
/db_xref="MIM:139255"
/translation="
MDPETCPCPSGGSCTCADSCKCEGCKCTSCKKSCCSCCPAECEKCAKDCVCKGGEAAEAEAEKCSCCQ"
misc_feature 64..267
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/note="Metallothionein; Region: Metallothio; pfam00131"
/db_xref="CDD:395080"
misc_feature 64..153
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/note="propagated from UniProtKB/Swiss-Prot (P25713.1);
Region: Beta"
misc_feature 64..66
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/note="N-acetylmethionine.
/evidence=ECO:0000269|PubMed:1873033; propagated from
UniProtKB/Swiss-Prot (P25713.1); acetylation site"
misc_feature 154..267
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/note="propagated from UniProtKB/Swiss-Prot (P25713.1);
Region: Alpha"
misc_feature 160..162
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:P28184; propagated from
UniProtKB/Swiss-Prot (P25713.1); phosphorylation site"
variation 64
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:763377633"
variation 65
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1477131347"
variation 66
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959795722"
variation 69
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1959795760"
variation 70
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:767241740"
variation 71
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1959795840"
variation 72
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1344448976"
variation 77
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:1959795952"
variation 78
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1419323015"
variation 81
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1296506106"
variation 86
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:199629919"
variation 87
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1959796362"
variation 89
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1472219981"
variation 92
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1567334543"
variation 93
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace=""
/replace="t"
/db_xref="dbSNP:773937129"
exon 95..160
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/inference="alignment:Splign:2.1.0"
variation 96
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1180588893"
variation 103
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:749437781"
variation 104
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:1959800640"
variation 108
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:553331211"
variation 112
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1215465645"
variation 113
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:779568909"
variation 117
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:748484416"
variation 119
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:772459593"
variation 122
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:2144277275"
variation 123
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:773486667"
variation 126
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:373869777"
variation 128
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1161816268"
variation 129
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1410704279"
variation 130
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1401658785"
variation 135
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="t"
/db_xref="dbSNP:536513187"
variation 137
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1452181715"
variation 138
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1239080210"
variation 141
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:554920606"
variation 142
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1310536869"
variation 143
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959801410"
variation 144
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:762450778"
variation 145
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="t"
/db_xref="dbSNP:763977123"
variation 146
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:1355869258"
variation 148
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:201877805"
variation 149
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:1317234710"
variation 151
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="t"
/db_xref="dbSNP:761790374"
variation 152
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1399661271"
variation 155
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:147656753"
variation 159
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:377749886"
exon 161..406
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/inference="alignment:Splign:2.1.0"
variation 165
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1361434239"
variation 167
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:757824995"
variation 170
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:781535156"
variation 171
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1381942893"
variation 177
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:750849515"
variation 178
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:1959813206"
variation 182
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:754570773"
variation 183
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:764974356"
variation 186
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:747654895"
variation 188
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1242798078"
variation 192
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:771506813"
variation 193
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="t"
/db_xref="dbSNP:1959813494"
variation 195
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959813536"
variation 197
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1388642034"
variation 199
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1237766983"
variation 200
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:575531391"
variation 201
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:1309145570"
variation 204
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:746914083"
variation 206
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959813774"
variation 208
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1959813809"
variation 210
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:771048118"
variation 213
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:546185397"
variation 218
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="t"
/db_xref="dbSNP:759409375"
variation 220
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1181139727"
variation 221
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1567334825"
variation 222
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="cctcc"
/db_xref="dbSNP:753702040"
variation 222
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:770097333"
variation 223
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:376369913"
variation 229
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1959814216"
variation 230
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1159056583"
variation 231
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:2144278331"
variation 232
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959814297"
variation 234
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1597054253"
variation 235
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959814379"
variation 237
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1381116960"
variation 238
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:763280981"
variation 239
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace=""
/replace="c"
/db_xref="dbSNP:1567334834"
variation 239
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1419381075"
variation 241
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959814543"
variation 243
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:2144278377"
variation 247
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:1959814601"
variation 251
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:1959814654"
variation 255
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:374052108"
variation 257
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1360899571"
variation 259
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="t"
/db_xref="dbSNP:1377551776"
variation 261
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:369569576"
variation 263
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:142343514"
variation 268
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:2144278423"
variation 269
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:762297545"
variation 275
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:199840778"
variation 276
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:768028559"
variation 277
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:750723110"
variation 278
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:756503118"
variation 279
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:1420129860"
variation 281
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:778489348"
variation 283
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:752272567"
variation 284
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1280297641"
variation 285
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:367643214"
variation 287
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1208841045"
variation 295
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:115372685"
variation 296
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1459066630"
variation 299
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:982364228"
variation 300
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:1959815357"
variation 301
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1237401657"
variation 305
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1204186279"
variation 307
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:746541143"
variation 311
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:770925338"
variation 315
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1427555205"
variation 317
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:938238217"
variation 320
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:2066841"
variation 322
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:1959815848"
variation 323
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1334022081"
variation 324
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1959815902"
variation 327
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:566721019"
variation 329
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="t"
/db_xref="dbSNP:1959815985"
variation 330
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1959816015"
variation 335
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1406618596"
variation 339
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:11555838"
variation 342
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1355849453"
variation 343
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959816150"
variation 347
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1048970"
variation 348
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1048972"
variation 349
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:747084155"
variation 352
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="g"
/db_xref="dbSNP:1294195810"
variation 353
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1201195915"
variation 354
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959816358"
variation 355
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="g"
/replace="t"
/db_xref="dbSNP:1959816395"
variation 356
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1048973"
variation 359
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:145772442"
variation 365
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1042504797"
variation 366
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1597054337"
variation 367
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1959816609"
variation 369
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1959816638"
variation 372
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:138441018"
variation 373
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:922292364"
variation 378
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:2144278585"
variation 379
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1394454690"
variation 381
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:1597054347"
variation 383
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1959816797"
regulatory 387..392
/regulatory_class="polyA_signal_sequence"
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/note="hexamer: AATAAA"
variation 387
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:933622714"
variation 388
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/db_xref="dbSNP:537309913"
variation 395
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1470411594"
variation 402
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="c"
/replace="t"
/db_xref="dbSNP:1463408594"
variation 405
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="c"
/db_xref="dbSNP:1959816953"
polyA_site 406
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/note="major polyA site"
variation 406
/gene="MT3"
/gene_synonym="GIF; GIFB; GRIF; ZnMT3"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:112319740"
ORIGIN
aagccgcgcgtccagttgcttggagaagcccgttcaccgcctccagctgctgctctcctcgacatggaccctgagacctgcccctgcccttctggtggctcctgcacctgcgcggactcctgcaagtgcgagggatgcaaatgcacctcctgcaagaagagctgctgctcctgctgccctgcggagtgtgagaagtgtgccaaggactgtgtgtgcaaaggcggagaggcagctgaggcagaagcagagaagtgcagctgctgccagtgagaaggcacccctccgtgtggagcacgtggagatagtgccaggtggctcagtgccacctatgcctgtggtgaagtgtggctggtgtccccttcccctgctgaccttggaggaatgacaataaatcccatgaacagca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]