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Previous release (v1)
2024-04-27 02:42:51, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_005125 1066 bp mRNA linear PRI 27-NOV-2023
DEFINITION Homo sapiens copper chaperone for superoxide dismutase (CCS), mRNA.
ACCESSION NM_005125 XM_938909
VERSION NM_005125.2
KEYWORDS RefSeq; MANE Select.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1066)
AUTHORS Lu Y, Chan YT, Wu J, Feng Z, Yuan H, Li Q, Xing T, Xu L, Zhang C,
Tan HY, Lee TK, Feng Y and Wang N.
TITLE CRISPR/Cas9 screens unravel miR-3689a-3p regulating sorafenib
resistance in hepatocellular carcinoma via suppressing
CCS/SOD1-dependent mitochondrial oxidative stress
JOURNAL Drug Resist Updat 71, 101015 (2023)
PUBMED 37924725
REMARK GeneRIF: CRISPR/Cas9 screens unravel miR-3689a-3p regulating
sorafenib resistance in hepatocellular carcinoma via suppressing
CCS/SOD1-dependent mitochondrial oxidative stress.
REFERENCE 2 (bases 1 to 1066)
AUTHORS Grasso M, Bond GJ, Kim YJ, Boyd S, Matson Dzebo M, Valenzuela S,
Tsang T, Schibrowsky NA, Alwan KB, Blackburn NJ, Burslem GM,
Wittung-Stafshede P, Winkler DD, Marmorstein R and Brady DC.
TITLE The copper chaperone CCS facilitates copper binding to MEK1/2 to
promote kinase activation
JOURNAL J Biol Chem 297 (6), 101314 (2021)
PUBMED 34715128
REMARK GeneRIF: The copper chaperone CCS facilitates copper binding to
MEK1/2 to promote kinase activation.
REFERENCE 3 (bases 1 to 1066)
AUTHORS Boyd SD, Ullrich MS, Calvo JS, Behnia F, Meloni G and Winkler DD.
TITLE Mutations in Superoxide Dismutase 1 (Sod1) Linked to Familial
Amyotrophic Lateral Sclerosis Can Disrupt High-Affinity
Zinc-Binding Promoted by the Copper Chaperone for Sod1 (Ccs)
JOURNAL Molecules 25 (5), 1086 (2020)
PUBMED 32121118
REMARK GeneRIF: Mutations in Superoxide Dismutase 1 (Sod1) Linked to
Familial Amyotrophic Lateral Sclerosis Can Disrupt High-Affinity
Zinc-Binding Promoted by the Copper Chaperone for Sod1 (Ccs).
Publication Status: Online-Only
REFERENCE 4 (bases 1 to 1066)
AUTHORS Skopp A, Boyd SD, Ullrich MS, Liu L and Winkler DD.
TITLE Copper-zinc superoxide dismutase (Sod1) activation terminates
interaction between its copper chaperone (Ccs) and the cytosolic
metal-binding domain of the copper importer Ctr1
JOURNAL Biometals 32 (4), 695-705 (2019)
PUBMED 31292775
REFERENCE 5 (bases 1 to 1066)
AUTHORS Karginova O, Weekley CM, Raoul A, Alsayed A, Wu T, Lee SS, He C and
Olopade OI.
TITLE Inhibition of Copper Transport Induces Apoptosis in Triple-Negative
Breast Cancer Cells and Suppresses Tumor Angiogenesis
JOURNAL Mol Cancer Ther 18 (5), 873-885 (2019)
PUBMED 30824611
REMARK GeneRIF: Here, we show that DCAC50, a recently developed
small-molecule inhibitor of the intracellular copper chaperones,
ATOX1 and CCS, reduces cell proliferation and elevates oxidative
stress, triggering apoptosis in a panel of triple-negative breast
cancer (TNBC) cells.
REFERENCE 6 (bases 1 to 1066)
AUTHORS Lamb AL, Wernimont AK, Pufahl RA, O'Halloran TV and Rosenzweig AC.
TITLE Crystal structure of the second domain of the human copper
chaperone for superoxide dismutase
JOURNAL Biochemistry 39 (7), 1589-1595 (2000)
PUBMED 10677207
REFERENCE 7 (bases 1 to 1066)
AUTHORS Rae TD, Schmidt PJ, Pufahl RA, Culotta VC and O'Halloran TV.
TITLE Undetectable intracellular free copper: the requirement of a copper
chaperone for superoxide dismutase
JOURNAL Science 284 (5415), 805-808 (1999)
PUBMED 10221913
REFERENCE 8 (bases 1 to 1066)
AUTHORS Rothstein JD, Dykes-Hoberg M, Corson LB, Becker M, Cleveland DW,
Price DL, Culotta VC and Wong PC.
TITLE The copper chaperone CCS is abundant in neurons and astrocytes in
human and rodent brain
JOURNAL J Neurochem 72 (1), 422-429 (1999)
PUBMED 9886096
REFERENCE 9 (bases 1 to 1066)
AUTHORS Casareno RL, Waggoner D and Gitlin JD.
TITLE The copper chaperone CCS directly interacts with copper/zinc
superoxide dismutase
JOURNAL J Biol Chem 273 (37), 23625-23628 (1998)
PUBMED 9726962
REFERENCE 10 (bases 1 to 1066)
AUTHORS Culotta VC, Klomp LW, Strain J, Casareno RL, Krems B and Gitlin JD.
TITLE The copper chaperone for superoxide dismutase
JOURNAL J Biol Chem 272 (38), 23469-23472 (1997)
PUBMED 9295278
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from AP001157.4 and AF002210.1.
This sequence is a reference standard in the RefSeqGene project.
On Nov 22, 2018 this sequence version replaced NM_005125.1.
Summary: Copper chaperone for superoxide dismutase specifically
delivers Cu to copper/zinc superoxide dismutase and may activate
copper/zinc superoxide dismutase through direct insertion of the Cu
cofactor. [provided by RefSeq, Jul 2008].
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR1163655.638477.1,
SRR1163655.337609.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA1965299, SAMEA1966682
[ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
MANE Ensembl match :: ENST00000533244.6/ ENSP00000436318.1
RefSeq Select criteria :: based on single protein-coding transcript
##RefSeq-Attributes-END##
COMPLETENESS: full length.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-34 AP001157.4 12289-12322
35-1066 AF002210.1 1-1032
FEATURES Location/Qualifiers
source 1..1066
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="11"
/map="11q13.2"
gene 1..1066
/gene="CCS"
/note="copper chaperone for superoxide dismutase"
/db_xref="GeneID:9973"
/db_xref="HGNC:HGNC:1613"
/db_xref="MIM:603864"
exon 1..116
/gene="CCS"
/inference="alignment:Splign:2.1.0"
variation 1
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1858409449"
variation 3..32
/gene="CCS"
/replace="tccccgcgacgccgcgctggttggtgctcc"
/replace="tccccgcgacgccgcgctggttggtgctccccgcgacgccgcgctggt
tggtgctcc"
/db_xref="dbSNP:1858409543"
variation 3
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1858409490"
variation 4
/gene="CCS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:896047999"
variation 5
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:529841224"
variation 6
/gene="CCS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:950332829"
variation 7
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858409769"
variation 10
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1044682980"
variation 12
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1489745811"
variation 13
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:757854559"
variation 14
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1858409989"
variation 15
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:376005966"
variation 17
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1333093133"
variation 18
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:112782649"
variation 21
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:550245855"
variation 22
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858410696"
variation 23
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1858410750"
variation 24
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1317376720"
variation 25
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1293522486"
variation 28
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:772007611"
variation 31
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:759603666"
variation 32
/gene="CCS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:752579107"
variation 33
/gene="CCS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1251401041"
variation 34
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:148810781"
variation 35
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:2134976114"
variation 37..38
/gene="CCS"
/replace="c"
/replace="cc"
/db_xref="dbSNP:1858411342"
variation 37
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:763826407"
variation 38
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:751129288"
variation 39..45
/gene="CCS"
/replace="ggag"
/replace="ggaggag"
/db_xref="dbSNP:1858411491"
variation 39
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1858411436"
variation 40
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1477900898"
variation 41
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1169053556"
variation 43
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1019175597"
variation 48
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:111984469"
variation 49
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1858411773"
variation 50
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:780512810"
variation 51
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1306834296"
variation 52
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:532915835"
variation 54
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858412038"
variation 55
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:369185929"
variation 56
/gene="CCS"
/replace=""
/replace="c"
/db_xref="dbSNP:1193502346"
variation 56
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1406335589"
variation 57
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:373408934"
variation 58
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1330371783"
variation 60
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1028948765"
variation 61
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1590826774"
variation 62
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1271907455"
variation 64
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1339927313"
variation 66
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1226303520"
variation 71
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:377577328"
variation 72
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858412682"
variation 75
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:75550902"
CDS 78..902
/gene="CCS"
/note="superoxide dismutase copper chaperone"
/codon_start=1
/product="copper chaperone for superoxide dismutase"
/protein_id="NP_005116.1"
/db_xref="CCDS:CCDS8146.1"
/db_xref="GeneID:9973"
/db_xref="HGNC:HGNC:1613"
/db_xref="MIM:603864"
/translation="
MASDSGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQLQNLGAAVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVWDVIGRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGIIARSAGLFQNPKQICSCDGLTIWEERGRPIAGKGRKESAQPPAHL"
misc_feature 117..836
/gene="CCS"
/note="copper, zinc superoxide dismutase; Region:
PLN02957"
/db_xref="CDD:215516"
misc_feature 339..779
/gene="CCS"
/note="propagated from UniProtKB/Swiss-Prot (O14618.1);
Region: Superoxide dismutase-like"
misc_feature 876..878
/gene="CCS"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:24275569; propagated from
UniProtKB/Swiss-Prot (O14618.1); phosphorylation site"
variation 78
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:978740750"
variation 79
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1225082492"
variation 80
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:866521646"
variation 81
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:2134976193"
variation 82
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1265517169"
variation 85
/gene="CCS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1451439150"
variation 91
/gene="CCS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:868824969"
variation 92
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1244368874"
variation 94
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1448156238"
variation 98..99
/gene="CCS"
/replace="c"
/replace="cc"
/db_xref="dbSNP:1167431997"
variation 101
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858413398"
variation 103
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1385243784"
variation 104
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1425999785"
variation 105
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:199967551"
variation 106
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1389539698"
variation 108
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858413670"
variation 109
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1858413736"
variation 110
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:779228954"
variation 112
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1319985135"
variation 115
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:534912458"
variation 116
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:772323037"
exon 117..189
/gene="CCS"
/inference="alignment:Splign:2.1.0"
variation 120
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:771093151"
variation 121
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:775571378"
variation 124..125
/gene="CCS"
/replace=""
/replace="g"
/db_xref="dbSNP:772522566"
variation 125..126
/gene="CCS"
/replace=""
/replace="aactt"
/db_xref="dbSNP:773421206"
variation 125
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:749120332"
variation 131
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1590827056"
variation 140
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:959133362"
variation 144
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1290499608"
variation 145
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858422519"
variation 148
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1348825349"
variation 151
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1228198720"
variation 152
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1284262232"
variation 155
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:768626429"
variation 156
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1319398432"
variation 157
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:774081476"
variation 158
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:543925670"
variation 159
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:767210418"
variation 160
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:113810834"
variation 161
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:563806954"
variation 165
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1430719934"
variation 166
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:760212307"
variation 173
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:967951335"
variation 179
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:765810923"
variation 180
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:377031211"
variation 184
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:753372996"
variation 186
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:755501132"
variation 187
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1555064224"
variation 188
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:765740277"
variation 189
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1462599106"
exon 190..327
/gene="CCS"
/inference="alignment:Splign:2.1.0"
variation 191
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:919963984"
variation 196
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:753207517"
variation 198
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:758837178"
variation 200
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:2134981511"
variation 203
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858528827"
variation 204
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:375013920"
variation 208
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1590829557"
variation 213
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:376196971"
variation 215
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858529056"
variation 216
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1261036540"
variation 219
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1391233822"
variation 220
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:751957472"
variation 223
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1186656903"
variation 225
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:757621525"
variation 233
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1448977810"
variation 236
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:572549240"
variation 239
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858529598"
variation 241
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:931376573"
variation 244
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:756170953"
variation 245
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:778751146"
variation 248
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:771870101"
variation 252
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:777609216"
variation 254
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1858529924"
variation 256
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1858530088"
variation 257..258
/gene="CCS"
/replace="g"
/replace="gg"
/db_xref="dbSNP:766499383"
variation 257
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1565060472"
variation 259
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1480989311"
variation 260
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:746772329"
variation 266
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:974123207"
variation 270
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:770615243"
variation 273
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:148223729"
variation 276
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1251428681"
variation 279..280
/gene="CCS"
/replace="g"
/replace="gg"
/db_xref="dbSNP:773282636"
variation 282
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:541530482"
variation 283
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1331010335"
variation 284
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1206554592"
variation 285
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:61731812"
variation 286
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:775873249"
variation 288
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:763610047"
variation 289
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:150675115"
variation 290
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:2134981615"
variation 292
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:752012956"
variation 295
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:200810443"
variation 296
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:750621987"
variation 299
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858531380"
variation 300
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1590829614"
variation 302
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:377031880"
variation 309
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:756157198"
variation 311
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:780127005"
variation 314
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:370094773"
variation 317
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:565700050"
variation 318
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:140920411"
variation 321
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:532214069"
variation 325
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1021695433"
variation 327
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:777662396"
exon 328..505
/gene="CCS"
/inference="alignment:Splign:2.1.0"
variation 329
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1369482120"
variation 335..339
/gene="CCS"
/replace="gggg"
/replace="ggggg"
/db_xref="dbSNP:1858535627"
variation 336
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1273050957"
variation 338
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:144968320"
variation 340
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1386105144"
variation 345
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1858535861"
variation 347
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1158303822"
variation 355
/gene="CCS"
/replace=""
/replace="t"
/db_xref="dbSNP:776919671"
variation 356..362
/gene="CCS"
/replace="gggggg"
/replace="ggggggg"
/replace="gggggggg"
/db_xref="dbSNP:759691599"
variation 356
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:61731811"
variation 361
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:185900251"
variation 362
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:745643257"
variation 363
/gene="CCS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:755832884"
variation 366
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1201410621"
variation 367
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:779831247"
variation 368
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858536796"
variation 370
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858536855"
variation 371
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:140142704"
variation 372
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:149989199"
variation 375
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858537074"
variation 377
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1858537106"
variation 379
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:552779599"
variation 380
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:748612840"
variation 381
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:182830642"
variation 382
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858537349"
variation 384
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:201630725"
variation 385
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:773695641"
variation 387
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:371247817"
variation 388
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:375835478"
variation 389
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1271419732"
variation 392
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1435644135"
variation 395
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858537842"
variation 399
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:932871572"
variation 401
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1327491339"
variation 403..406
/gene="CCS"
/replace="cccc"
/replace="ccccc"
/db_xref="dbSNP:36016381"
variation 403
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1043318773"
variation 409
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:893430352"
variation 411
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:776789603"
variation 412
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:759613252"
variation 414
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1423666174"
variation 415
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1858538910"
variation 416
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858538954"
variation 418..422
/gene="CCS"
/replace="tc"
/replace="tcatc"
/db_xref="dbSNP:1858539004"
variation 419
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858539049"
variation 420
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:765242047"
variation 422
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:946018387"
variation 423
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:202148109"
variation 426
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1212014528"
variation 427
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:535153686"
variation 437
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:145161523"
variation 438
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:750283280"
variation 440
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:755818904"
variation 441
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1447182412"
variation 442
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1192682564"
variation 444
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1187346032"
variation 446
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:186651111"
variation 447
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:573428621"
variation 448
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:748883006"
variation 451
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:754553140"
variation 455
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858540084"
variation 457
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1457561971"
variation 467
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:574904327"
variation 468
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:368191906"
variation 471
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:907258856"
variation 472
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1305192085"
variation 475
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1733081233"
variation 476
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:772680331"
variation 479
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:773541450"
variation 480
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:747428310"
variation 481
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1858540619"
variation 483
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1247340250"
variation 485
/gene="CCS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:201708896"
variation 486
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1565060776"
variation 487
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:759811702"
variation 491
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:200506331"
variation 492
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1209720592"
variation 494
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1858541039"
variation 497
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:765438439"
variation 498
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:199717297"
variation 499
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1463899910"
variation 500
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:775586150"
variation 502
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1256162047"
variation 505
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858541379"
exon 506..566
/gene="CCS"
/inference="alignment:Splign:2.1.0"
variation 508
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858554933"
variation 509
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:778343149"
variation 510
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1237426833"
variation 511
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1291577431"
variation 514
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858556171"
variation 515
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:2134982666"
variation 516
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:747412790"
variation 524
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:771414162"
variation 526
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1457266419"
variation 529
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:781602860"
variation 530
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:901108390"
variation 531
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1472132891"
variation 535
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1273026506"
variation 536
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858556570"
variation 540
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:367757609"
variation 541
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1379269105"
variation 545
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:746198055"
variation 546
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:934899550"
variation 547
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1441790843"
variation 548..552
/gene="CCS"
/replace="ccccc"
/replace="cccccc"
/db_xref="dbSNP:1375089490"
variation 548
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1410596348"
variation 549
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:989474920"
variation 551
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:149172285"
variation 553
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:775527758"
variation 556
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1391159087"
variation 558
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1273929029"
variation 559
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:763126852"
variation 560
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:371482988"
variation 563
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858557533"
variation 564
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:142340643"
variation 565
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:146737817"
exon 567..644
/gene="CCS"
/inference="alignment:Splign:2.1.0"
variation 568
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:755199781"
variation 569
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:779176053"
variation 570
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:140345138"
variation 571
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:772209003"
variation 572
/gene="CCS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:200121959"
variation 573
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:745854670"
variation 579..580
/gene="CCS"
/replace=""
/replace="ct"
/db_xref="dbSNP:1189669219"
variation 579
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1168513397"
variation 581
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1238152007"
variation 585
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:951105505"
variation 586
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:769765686"
variation 587
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1177548511"
variation 588
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:775188180"
variation 589
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:986521418"
variation 590
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858637347"
variation 591
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:375633567"
variation 592
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:773748375"
variation 593
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:773953643"
variation 594
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:145400974"
variation 596
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:766956703"
variation 598
/gene="CCS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858637751"
variation 601
/gene="CCS"
/replace=""
/replace="c"
/db_xref="dbSNP:1219899061"
variation 605
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:372097218"
variation 606
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:146522916"
variation 608
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1858638031"
variation 609
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:140863701"
variation 610
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:150097654"
variation 611
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:755325271"
variation 612
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:367642079"
variation 613
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858638331"
variation 614
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1590832456"
variation 615
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858638433"
variation 621
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1305672429"
variation 622
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858638538"
variation 624
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1590832465"
variation 625
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1232835580"
variation 628
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1478603087"
variation 631
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1193419706"
variation 634
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:375174622"
variation 644
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:200644962"
exon 645..748
/gene="CCS"
/inference="alignment:Splign:2.1.0"
variation 645
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1473015445"
variation 647
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1453301076"
variation 651
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:760212703"
variation 652
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1391644547"
variation 659
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:766821533"
variation 660
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:754333716"
variation 663
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:201766493"
variation 664
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:373460235"
variation 665
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1323859066"
variation 666
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:779434367"
variation 667
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:765752116"
variation 671
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1298352017"
variation 676
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1279347900"
variation 677
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:753104213"
variation 681
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:761126838"
variation 682
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:758732809"
variation 683
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1590832578"
variation 685
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:778116806"
variation 686
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:536515042"
variation 687
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:751710858"
variation 689
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:201296030"
variation 690
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1271851594"
variation 692
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858642000"
variation 698
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1468382994"
variation 700
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1565063023"
variation 701
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:779860835"
variation 702
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1565063055"
variation 703..706
/gene="CCS"
/replace="ggg"
/replace="gggg"
/db_xref="dbSNP:753056942"
variation 703
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858642313"
variation 704
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1249423611"
variation 708
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:749192348"
variation 713
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1192088102"
variation 714
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1368654282"
variation 715
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:768467295"
variation 716
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:2134987024"
variation 719
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1858642761"
variation 723
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1858642816"
variation 724
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1162473097"
variation 726
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858642915"
variation 728
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1858642966"
variation 731
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1417100062"
variation 734
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:377383808"
variation 736
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1457644812"
variation 737
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:778748665"
variation 738
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1387294260"
variation 739
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:747910396"
variation 740
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1185600202"
variation 741
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:576527998"
variation 746
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:772807257"
exon 749..1066
/gene="CCS"
/inference="alignment:Splign:2.1.0"
variation 749
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:763414106"
variation 754
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1430828366"
variation 756
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:996714499"
variation 758
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1394977685"
variation 760
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:138370847"
variation 762
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1021893681"
variation 763
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:968590662"
variation 766
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858647089"
variation 769
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:977341120"
variation 770
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1372587590"
variation 771
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:774566620"
variation 772
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1302260691"
variation 775
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858647371"
variation 776
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:767604410"
variation 777
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:10061"
variation 778
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:750568458"
variation 783
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:756139724"
variation 784
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1858647588"
variation 785
/gene="CCS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1210411614"
variation 789
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:765194748"
variation 791
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:923937645"
variation 792
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858647839"
variation 793
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:752568011"
variation 794
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858647968"
variation 795
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:992639743"
variation 796
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1858648075"
variation 799
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1047957280"
variation 801
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:908148014"
variation 805
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:944659445"
variation 806
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1040413982"
variation 809
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:758314066"
variation 810
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858648421"
variation 813
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:561125812"
variation 815
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:201606373"
variation 816
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:149284164"
variation 818
/gene="CCS"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:756979792"
variation 819
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:2134987307"
variation 820
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:920101011"
variation 824
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858648845"
variation 829
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858648894"
variation 830
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1127141"
variation 837
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1324559395"
variation 840
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:745413014"
variation 841
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:769362989"
variation 846
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1292967871"
variation 847
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:373751466"
variation 848
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1245199841"
variation 851
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1275000196"
variation 852
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:143494418"
variation 854
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:886764512"
variation 855
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:769281643"
variation 860
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:137970813"
variation 865
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:143215772"
variation 867
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:767806191"
variation 868
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:147502080"
variation 872
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1166028704"
variation 879
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:760753625"
variation 880
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:554910347"
variation 881
/gene="CCS"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1127145"
variation 882
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1388793900"
variation 885..889
/gene="CCS"
/replace="cccc"
/replace="ccccc"
/db_xref="dbSNP:748697782"
variation 885
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:867758567"
variation 886
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1021421444"
variation 887
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1286789446"
variation 888
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:201533764"
variation 889
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1396407088"
variation 890
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1294831181"
variation 893
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1858651081"
variation 894
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1332411066"
variation 899
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1232666141"
variation 909..910
/gene="CCS"
/replace="c"
/replace="cc"
/db_xref="dbSNP:1858651388"
variation 909
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:763913397"
variation 910
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858651438"
variation 912
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:551837298"
variation 915
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858651538"
variation 918
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:201822594"
variation 921
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:780901578"
variation 922
/gene="CCS"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:745458704"
variation 925
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1250013956"
variation 927
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:968581206"
variation 933
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:755815575"
variation 935
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858651834"
variation 937
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:971734484"
variation 940
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:779777761"
variation 941
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1282895165"
variation 942
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:773363948"
variation 944
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858652069"
variation 953
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1590832939"
variation 955
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1352433334"
variation 960
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:956673986"
variation 962
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1308695596"
variation 963
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1303447066"
variation 966
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1395680359"
variation 969
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:747225308"
variation 972
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858652413"
variation 977..979
/gene="CCS"
/replace="tt"
/replace="ttt"
/replace="tttt"
/db_xref="dbSNP:1467405865"
variation 979
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1033983953"
variation 980
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1367186809"
variation 981
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858652655"
variation 985
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1175302988"
variation 986
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858652750"
variation 990
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1479223261"
variation 1005
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1590832969"
variation 1008
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858652882"
variation 1010..1012
/gene="CCS"
/replace="gg"
/replace="ggg"
/db_xref="dbSNP:1858652927"
variation 1011
/gene="CCS"
/replace="c"
/replace="g"
/db_xref="dbSNP:1413594531"
variation 1013
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1858653038"
variation 1014
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1858653086"
variation 1015
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858653135"
variation 1019
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:958398936"
variation 1021
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1419068765"
variation 1022
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1389505234"
variation 1031
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:2134987485"
variation 1033
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1327974797"
variation 1036
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1336230801"
variation 1037
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:1858653419"
regulatory 1041..1046
/regulatory_class="polyA_signal_sequence"
/gene="CCS"
/note="hexamer: AATGAA"
variation 1043
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:973789740"
variation 1045
/gene="CCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:558948617"
variation 1048
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:2134987495"
variation 1049..1052
/gene="CCS"
/replace="tt"
/replace="tttt"
/db_xref="dbSNP:952231144"
variation 1049
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:969464081"
variation 1051
/gene="CCS"
/replace="g"
/replace="t"
/db_xref="dbSNP:1858653692"
variation 1053
/gene="CCS"
/replace="a"
/replace="t"
/db_xref="dbSNP:1858653740"
variation 1058
/gene="CCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:908092681"
variation 1059
/gene="CCS"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1289143310"
variation 1064
/gene="CCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:771207391"
polyA_site 1066
/gene="CCS"
/note="major polyA site"
ORIGIN
agtccccgcgacgccgcgctggttggtgctcctgcgccggaggagttctgcgtctcggggtggtgactgggtccagaatggcttcggattcggggaaccaggggaccctctgcacgttggagttcgcggtgcagatgacctgtcagagctgtgtggacgcggtgcgcaaatccctgcaaggggtggcaggtgtccaggatgtggaggtgcacttggaggaccagatggtcttggtacacaccactctacccagccaggaggtgcaggctctcctggaaggcacggggcggcaggcggtactcaagggcatgggcagcggccagttgcagaatctgggggcagcagtggccatcctgggggggcctggcaccgtgcagggggtggtgcgcttcctacagctgacccctgagcgctgcctcatcgagggaactattgacggcctggagcctgggctgcatggactccacgtccatcagtacggggaccttacaaacaactgcaacagctgtgggaatcactttaaccctgatggagcatctcatgggggcccccaggactctgaccggcaccgcggagacctgggcaatgtccgtgctgatgctgacggccgcgccatcttcagaatggaggatgagcagctgaaggtgtgggatgtgattggccgcagcctgattattgatgagggagaagatgacctgggccggggaggccatcccttatccaagatcacagggaactccggggagaggttggcctgtggcatcattgcacgctccgctggccttttccagaaccccaagcagatctgctcttgcgatggcctcaccatctgggaggagcgaggccggcccatcgctggcaagggccgaaaggagtcagcgcagccccctgcccacctttgagcaggacctcaccttggctctgttgctgtcctccagggcgagcactttccacttccagagggggccagagggactttgcctgcccagtctttggagagctcagtacagggcaggagctgctgtggtgttcccttggcaaatgaaagttttattttcgtttggga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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