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2024-04-29 00:58:34, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_001422082            1129 bp    mRNA    linear   PRI 10-OCT-2023
DEFINITION  Homo sapiens testis-specific Y-encoded protein 1 (LOC124909015),
            mRNA.
ACCESSION   NM_001422082 XM_047447224
VERSION     NM_001422082.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from CP086569.2.
            
            On Jun 1, 2023 this sequence version replaced XM_047447224.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2148093 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-500               CP086569.2         9633555-9634054
            501-578             CP086569.2         9634662-9634739
            579-690             CP086569.2         9634868-9634979
            691-836             CP086569.2         9635081-9635226
            837-918             CP086569.2         9635333-9635414
            919-1129            CP086569.2         9636109-9636319
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="Y"
                     /map="Y"
     gene            1..1129
                     /gene="LOC124909015"
                     /note="testis-specific Y-encoded protein 1"
                     /db_xref="GeneID:124909015"
     exon            1..500
                     /gene="LOC124909015"
                     /inference="alignment:Splign:2.1.0"
     CDS             15..941
                     /gene="LOC124909015"
                     /codon_start=1
                     /product="testis-specific Y-encoded protein 1"
                     /protein_id="NP_001409011.1"
                     /db_xref="GeneID:124909015"
                     /translation="
MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS"
     misc_feature    390..878
                     /gene="LOC124909015"
                     /note="Nucleosome assembly protein (NAP); Region: NAP;
                     cl08298"
                     /db_xref="CDD:447601"
     exon            501..578
                     /gene="LOC124909015"
                     /inference="alignment:Splign:2.1.0"
     exon            579..690
                     /gene="LOC124909015"
                     /inference="alignment:Splign:2.1.0"
     exon            691..836
                     /gene="LOC124909015"
                     /inference="alignment:Splign:2.1.0"
     exon            837..918
                     /gene="LOC124909015"
                     /inference="alignment:Splign:2.1.0"
     exon            919..1129
                     /gene="LOC124909015"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
tggaagcccggcgcatgcgccctgagggctcgctgacctaccgggtgccagagaggctgcggcagggtttctgtggcgtgggtcgggcagcacaggccttggtgtgtgcgagtgccaaggagggcaccgccttcaggatggaggctgtgcaggagggggcggccggggtggagagtgagcaggcggctttgggggaggaggcggtgctgctgttggatgacataatggcggaggtggaggtggtggcggaggaggagggcctcgtggagcggcgggaggaggcccagcgggcacagcaggctgtgcctggccctgggcccatgaccccagagtctgcaccggaggagctgctggccgttcaggtggagctggagccggttaatgcccaagccaggaaggccttttctcggcagcgggaaaagatggagcggaggcgcaagccccacctagaccgcagaggcgccgtcatccagagcgtccctggcttctgggccaatgttattgcaaaccacccccagatgtcagccctgatcactgacgaagatgaagacatgctgagctacatggtcagcctggaggtggaagaagagaagcatcctgttcatctctgcaagatcatgttgttctttcggagtaacccctacttccagaataaagtgattaccaaggaatatctggtgaacatcacagaatacagggcttctcattccactccaattgagtggtatccggattatgaagtggaggcctatcgccgcagacaccacaacagcagccttaacttcttcaactggttctctgaccacaacttcgcaggatctaacaagattgctgagatcctatgtaaggacctgtggcgcaatcccctgcaatactacaagaggatgaagccacctgaagagggaacagagacgtcaggggactcccagttgttgagttgaatatgatggagcatcagattttacctaatacagcagaactcctaaaaagttacagccatatgcaggacggcagtactcagcatggtcttatgcacaggaactaaaggaaaaagagatcgagtcacaaaaattcaggaagagggggtaaatgtggattgtatggaatgaaaaataaacattctcaagga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]