ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2024-05-04 18:39:25, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001413015 7983 bp mRNA linear PRI 24-NOV-2023
DEFINITION Homo sapiens ATPase sarcoplasmic/endoplasmic reticulum Ca2+
transporting 2 (ATP2A2), transcript variant e, mRNA.
ACCESSION NM_001413015
VERSION NM_001413015.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7983)
AUTHORS Brini M and Cali T.
TITLE SERCA2 phosphorylation at the heart of the disease
JOURNAL Cell Calcium 115, 102784 (2023)
PUBMED 37572431
REMARK GeneRIF: SERCA2 phosphorylation at the heart of the disease.
REFERENCE 2 (bases 1 to 7983)
AUTHORS Yang JF, Xing X, Luo L, Zhou XW, Feng JX, Huang KB, Liu H, Jin S,
Liu YN, Zhang SH, Pan YH, Yu B, Yang JY, Cao YL, Cao Y, Yang CY,
Wang Y, Zhang Y, Li J, Xia X, Kang T, Xu RH, Lan P, Luo JH, Han H,
Bai F and Gao S.
TITLE Mitochondria-ER contact mediated by MFN2-SERCA2 interaction
supports CD8+ T cell metabolic fitness and function in tumors
JOURNAL Sci Immunol 8 (87), eabq2424 (2023)
PUBMED 37738362
REMARK GeneRIF: Mitochondria-ER contact mediated by MFN2-SERCA2
interaction supports CD8[+] T cell metabolic fitness and function
in tumors.
REFERENCE 3 (bases 1 to 7983)
AUTHORS Gonnot F, Boulogne L, Brun C, Dia M, Gouriou Y, Bidaux G, Chouabe
C, Crola Da Silva C, Ducreux S, Pillot B, Kaczmarczyk A, Leon C,
Chanon S, Perret C, Sciandra F, Dargar T, Gache V, Farhat F, Sebbag
L, Bochaton T, Thibault H, Ovize M, Paillard M and Gomez L.
TITLE SERCA2 phosphorylation at serine 663 is a key regulator of Ca2+
homeostasis in heart diseases
JOURNAL Nat Commun 14 (1), 3346 (2023)
PUBMED 37291092
REMARK GeneRIF: SERCA2 phosphorylation at serine 663 is a key regulator of
Ca[2+] homeostasis in heart diseases.
Publication Status: Online-Only
REFERENCE 4 (bases 1 to 7983)
AUTHORS Dode L, Andersen JP, Leslie N, Dhitavat J, Vilsen B and Hovnanian
A.
TITLE Dissection of the functional differences between sarco(endo)plasmic
reticulum Ca2+-ATPase (SERCA) 1 and 2 isoforms and characterization
of Darier disease (SERCA2) mutants by steady-state and transient
kinetic analyses
JOURNAL J Biol Chem 278 (48), 47877-47889 (2003)
PUBMED 12975374
REMARK GeneRIF: kinetic analysis of SERCA1 and SERCA2 isoforms and the
effects of mutation
REFERENCE 5 (bases 1 to 7983)
AUTHORS Gelebart P, Martin V, Enouf J and Papp B.
TITLE Identification of a new SERCA2 splice variant regulated during
monocytic differentiation
JOURNAL Biochem Biophys Res Commun 303 (2), 676-684 (2003)
PUBMED 12659872
REMARK GeneRIF: A new splice variant is identified that is regulated
during monocytic differentiation.
REFERENCE 6 (bases 1 to 7983)
AUTHORS Zarain-Herzberg A and Alvarez-Fernandez G.
TITLE Sarco(endo)plasmic reticulum Ca2+-ATPase-2 gene: structure and
transcriptional regulation of the human gene
JOURNAL ScientificWorldJournal 2, 1469-1483 (2002)
PUBMED 12805933
REMARK GeneRIF: Structure and transcriptional regulation of the SERCA2
gene.
Publication Status: Online-Only
REFERENCE 7 (bases 1 to 7983)
AUTHORS Sakuntabhai A, Burge S, Monk S and Hovnanian A.
TITLE Spectrum of novel ATP2A2 mutations in patients with Darier's
disease
JOURNAL Hum Mol Genet 8 (9), 1611-1619 (1999)
PUBMED 10441323
REFERENCE 8 (bases 1 to 7983)
AUTHORS Toyofuku T, Curotto Kurzydlowski K, Narayanan N and MacLennan DH.
TITLE Identification of Ser38 as the site in cardiac sarcoplasmic
reticulum Ca(2+)-ATPase that is phosphorylated by
Ca2+/calmodulin-dependent protein kinase
JOURNAL J Biol Chem 269 (42), 26492-26496 (1994)
PUBMED 7929371
REFERENCE 9 (bases 1 to 7983)
AUTHORS Otsu K, Fujii J, Periasamy M, Difilippantonio M, Uppender M, Ward
DC and MacLennan DH.
TITLE Chromosome mapping of five human cardiac and skeletal muscle
sarcoplasmic reticulum protein genes
JOURNAL Genomics 17 (2), 507-509 (1993)
PUBMED 8406504
REFERENCE 10 (bases 1 to 7983)
AUTHORS Lytton J and MacLennan DH.
TITLE Molecular cloning of cDNAs from human kidney coding for two
alternatively spliced products of the cardiac Ca2+-ATPase gene
JOURNAL J Biol Chem 263 (29), 15024-15031 (1988)
PUBMED 2844796
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from AC006088.1.
Summary: This gene encodes one of the SERCA Ca(2+)-ATPases, which
are intracellular pumps located in the sarcoplasmic or endoplasmic
reticula of the skeletal muscle. This enzyme catalyzes the
hydrolysis of ATP coupled with the translocation of calcium from
the cytosol into the sarcoplasmic reticulum lumen, and is involved
in regulation of the contraction/relaxation cycle. Mutations in
this gene cause Darier-White disease, also known as keratosis
follicularis, an autosomal dominant skin disorder characterized by
loss of adhesion between epidermal cells and abnormal
keratinization. Other types of mutations in this gene have been
associated with various forms of muscular dystrophies. Alternative
splicing results in multiple transcript variants encoding different
isoforms. [provided by RefSeq, Dec 2019].
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR18074969.1906424.1,
SRR14038193.2291133.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA1968540, SAMEA2144835
[ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: full length.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-349 AC006088.1 41263-41611
350-367 AC006088.1 43251-43268
368-450 AC006088.1 43360-43442
451-555 AC006088.1 52667-52771
556-694 AC006088.1 57246-57384
695-775 AC006088.1 83639-83719
776-861 AC006088.1 87037-87122
862-1326 AC006088.1 88200-88664
1327-1415 AC006088.1 93244-93332
1416-1518 AC006088.1 93828-93930
1519-1650 AC006088.1 94659-94790
1651-1773 AC006088.1 99928-100050
1774-1992 AC006088.1 100150-100368
1993-2328 AC006088.1 101306-101641
2329-2549 AC006088.1 102875-103095
2550-2752 AC006088.1 103879-104081
2753-2838 AC006088.1 105533-105618
2839-2972 AC006088.1 105896-106029
2973-3090 AC006088.1 106648-106765
3091-7983 AC006088.1 106848-111740
FEATURES Location/Qualifiers
source 1..7983
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="12"
/map="12q24.11"
gene 1..7983
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/note="ATPase sarcoplasmic/endoplasmic reticulum Ca2+
transporting 2"
/db_xref="GeneID:488"
/db_xref="HGNC:HGNC:812"
/db_xref="MIM:108740"
exon 1..349
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
misc_feature 325..327
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/note="upstream in-frame stop codon"
exon 350..367
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 368..450
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 451..555
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 556..694
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
CDS 607..3360
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/note="isoform e is encoded by transcript variant e;
ATPase, Ca++ dependent, slow-twitch, cardiac muscle-2;
sarcoplasmic/endoplasmic reticulum calcium ATPase 2;
calcium pump 2; SR Ca(2+)-ATPase 2; endoplasmic reticulum
class 1/2 Ca(2+) ATPase; cardiac Ca2+ ATPase; ATPase Ca++
transporting cardiac muscle slow twitch 2"
/codon_start=1
/product="sarcoplasmic/endoplasmic reticulum calcium
ATPase 2 isoform e"
/protein_id="NP_001399944.1"
/db_xref="GeneID:488"
/db_xref="HGNC:HGNC:812"
/db_xref="MIM:108740"
/translation="
MGKVYRQDRKSVQRIKAKDIVPGDIVEIAVGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVVATGVNTEIGKIRDEMVATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFILDRVEGDTCSLNEFTITGSTYAPIGEVHKDDKPVNCHQYDGLVELATICALCNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTELKGLSKIERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPNKPSRTSMSKMFVKGAPEGVIDRCTHIRVGSTKVPMTSGVKQKIMSVIREWGSGSDTLRCLALATHDNPLRREEMHLEDSANFIKYETNLTFVGCVGMLDPPRIEVASSVKLCRQAGIRVIMITGDNKGTAVAICRRIGIFGQDEDVTSKAFTGREFDELNPSAQRDACLNARCFARVEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPDFEGVDCAIFESPYPMTMALSVLVTIEMCNALNSLSENQSLLRMPPWENIWLVGSICLSMSLHFLILYVEPLPLIFQITPLNVTQWLMVLKISLPVILMDETLKFVARNYLEPGKECVQPATKSCSFSACTDGISWPFVLLIMPLVIWVYSTDTNFSDMFWS"
misc_feature 607..3195
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/note="sarco/endoplasmic reticulum Ca(2+)-ATPase (SERCA),
similar to mammalian ATP2A1-3/SERCA1-3; Region:
P-type_ATPase_SERCA; cd02083"
/db_xref="CDD:319778"
misc_feature order(1156..1158,2614..2616,2626..2628)
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/note="Ca binding site [ion binding]; other site"
/db_xref="CDD:319778"
misc_feature order(1282..1290,1555..1557,1690..1692,1696..1698,
1705..1707,1711..1713,1771..1779,1906..1908,1912..1914,
2101..2109,2260..2262,2278..2280,2335..2337,2344..2346)
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:319778"
misc_feature order(2530..2532,2539..2541,2623..2628,2950..2952)
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/note="Ca binding site [ion binding]; other site"
/db_xref="CDD:319778"
exon 695..775
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 776..861
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 862..1326
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 1327..1415
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 1416..1518
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 1519..1650
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 1651..1773
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 1774..1992
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 1993..2328
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 2329..2549
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 2550..2752
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 2753..2838
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 2839..2972
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 2973..3090
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
exon 3091..7983
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/inference="alignment:Splign:2.1.0"
regulatory 4184..4189
/regulatory_class="polyA_signal_sequence"
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/note="hexamer: AATAAA"
polyA_site 4213
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/note="major polyA site"
regulatory 7962..7967
/regulatory_class="polyA_signal_sequence"
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/note="hexamer: AATAAA"
polyA_site 7983
/gene="ATP2A2"
/gene_synonym="ATP2B; DAR; DD; SERCA2"
/note="major polyA site"
ORIGIN
agaacccgctggggaagaatcggggctggcgtgcgaaggagctggcggcagggggtgtaggatgcggtgttcccgaggcgacagatgaaggatttgggttgtgtgggaagtgaactgcggaattcctccccttggtttctgaggggggctctgaaggagccagattaggatgcagagcgcagcccgggcgaccgagggcgaggaggcgagccaaggacatcagcccgagggcgcctcgagacgccccgcgtggaccgcgctcccagctcctcggcctcgccttccaaccatccgcccaccggccccagagcagcgtgcccactgtgagcgccccaccctgcgtctgcagagttaccggctgaagaaggaaaaaccttgctggaacttgtgattgagcagtttgaagacttgctagttaggattttattactggcagcatgtatatcttttgttttggcttggtttgaagaaggtgaagaaacaattacagcctttgtagaaccttttgtaattttactcatattagtagccaatgcaattgtgggtgtatggcaggaaagaaatgctgaaaatgccatcgaagcccttaaggaatatgagcctgaaatgggcaaagtgtatcgacaggacagaaagagtgtgcagcggattaaagctaaagacatagttcctggtgatattgtagaaattgctgttggtgacaaagttcctgctgatataaggttaacttccatcaaatctaccacactaagagttgaccagtcaattctcacaggtgaatctgtctctgtcatcaagcacactgatcccgtccctgacccacgagctgtcaaccaagataaaaagaacatgctgttttctggtacaaacattgctgctgggaaagctatgggagtggtggtagcaactggagttaacaccgaaattggcaagatccgggatgaaatggtggcaacagaacaggagagaacaccccttcagcaaaaactagatgaatttggggaacagctttccaaagtcatctcccttatttgcattgcagtctggatcataaatattgggcacttcaatgacccggttcatggagggtcctggatcagaggtgctatttactactttaaaattgcagtggccctggctgtagcagccattcctgaaggtctgcctgcagtcatcaccacctgcctggctcttggaactcgcagaatggcaaagaaaaatgccattgttcgaagcctcccgtctgtggaaacccttggttgtacttctgttatctgctcagacaagactggtacacttacaacaaaccagatgtcagtctgcaggatgttcattctggacagagtggaaggtgatacttgttcccttaatgagtttaccataactggatcaacttatgcacctattggagaagtgcataaagatgataaaccagtgaattgtcaccagtatgatggtctggtagaattagcaacaatttgtgctctttgtaatgactctgctttggattacaatgaggcaaagggtgtgtatgaaaaagttggagaagctacagagactgctctcacttgcctagtagagaagatgaatgtatttgataccgaattgaagggtctttctaaaatagaacgtgcaaatgcctgcaactcagtcattaaacagctgatgaaaaaggaattcactctagagttttcacgtgacagaaagtcaatgtcggtttactgtacaccaaataaaccaagcaggacatcaatgagcaagatgtttgtgaagggtgctcctgaaggtgtcattgacaggtgcacccacattcgagttggaagtactaaggttcctatgacctctggagtcaaacagaagatcatgtctgtcattcgagagtggggtagtggcagcgacacactgcgatgcctggccctggccactcatgacaacccactgagaagagaagaaatgcaccttgaggactctgccaactttattaaatatgagaccaatctgaccttcgttggctgcgtgggcatgctggatcctccgagaatcgaggtggcctcctccgtgaagctgtgccggcaagcaggcatccgggtcatcatgatcactggggacaacaagggcactgctgtggccatctgtcgccgcatcggcatcttcgggcaggatgaggacgtgacgtcaaaagctttcacaggccgggagtttgatgaactcaacccctccgcccagcgagacgcctgcctgaacgcccgctgttttgctcgagttgaaccctcccacaagtctaaaatcgtagaatttcttcagtcttttgatgagattacagctatgactggcgatggcgtgaacgatgctcctgctctgaagaaagccgagattggcattgctatgggctctggcactgcggtggctaaaaccgcctctgagatggtcctggcggatgacaacttctccaccattgtggctgccgttgaggaggggcgggcaatctacaacaacatgaaacagttcatccgctacctcatctcgtccaacgtcggggaagttgtctgtattttcctgacagcagcccttggatttcccgaggctttgattcctgttcagctgctctgggtcaatctggtgacagatggcctgcctgccactgcactggggttcaaccctcctgatctggacatcatgaataaacctccccggaacccaaaggaaccattgatcagcgggtggctctttttccgttacttggctattggctgttacgtcggcgctgctaccgtgggtgctgctgcatggtggttcattgctgctgacggtggtccaagagtgtccttctaccagctgagtcatttcctacagtgtaaagaggacaacccggactttgaaggcgtggattgtgcaatctttgaatccccatacccgatgacaatggcgctctctgttctagtaactatagaaatgtgtaacgccctcaacagcttgtccgaaaaccagtccttgctgaggatgcccccctgggagaacatctggctcgtgggctccatctgcctgtccatgtcactccacttcctgatcctctatgtcgaacccttgccactcatcttccagatcacaccgctgaacgtgacccagtggctgatggtgctgaaaatctccttgcccgtgattctcatggatgagacgctcaagtttgtggcccgcaactacctggaacctggtaaagagtgtgtgcagcctgccaccaaatcctgctcgttctcggcatgcaccgatgggatttcctggccgtttgtgctgctcataatgcccctggtgatctgggtctatagcacagacactaactttagcgatatgttctggtcttgactgacagttttccataaagaagatgtttaacttaatcaattaatttttttattgtttaaagcaactgtctatttctgctgaattttcacatgaacatactggctggtgatggaggtttcatactctagattttgttttgctttttctgactccagtggggcaagattttccttttttatacacataattaaagtgtccattgacatgtacagagaactaacactattttatgcaaatatttttttgtagatgaaaaagcatgtacagtgttctgtttaatactcatccttgtataaaaaaaatagttgagccagcagacattgtcagcaaattaattggcagcagattttaggaaatgaatgtgtgtggttttttttctaaaactaaatagcatgtattgtgtcttttgcatgatgatccggatttaatttgatatcacagtctaatttttattcataagccaatttttctgcactgagcagagtcttgctacctcagtcagtattgttttggtttgctacttccctcacccactttggcctccgttcaccccaccccaccccacctctccccaccttacccccgccccgcttggcttcttctttaggattgtgatggttcgttctgtttacatcagttttaacgagaggtatgcctgtactcgcttgtgcagaaaacattgttccagattcaatcgactgggtttatgtcccttcacatagtttttaaggttatttatttaaatgtctaatgtattttattgtaacagacattgttttgccaacattgcctatttcagtggcacgtcatctagttttaaaaaaataaaacattttaaatggacagagaaaaataactgtcttgtctttaactcgtaagtggcttacctgggactaacagacatgtccaactttctctccagttcttagctcagaactttagttgtactctgcttgaggggaagaaggctcctgctctgctgtgtaggtagtcataggaattgtattcttaatgtacaggcactaattgtcatctgtgatgtacattttatgcaagtttctgctggcctggtatagagaacataagggcaagtgtgtatgtgtgtgtatgtgtgtgttttgtaaaatctgtaaatagcacatgaccaaatgaacatattgtatagaactatttttatttgaatgtggcactaaccaccaccaccgttactacgatcaatgtttgcgcatgttcgagatgagtctcaccaacagtgtgtaagtcattaacagtcctaactgtggtgttttcctccaatgccttccaacatccatcaactaacgtgagtattttcttcctgggatttggatgctttagcctaaaggtgactgccaccaagtgagataactgtatgtcactaacttataagccgcctccatggcagatgctgctgtgctccctgatgccctgtgagcaccggggttgcctgtggcgcctgccatgtgactcgggcgcagcatcagctggctggaggtgtggctttcatagacctccacaggctgcctaggacaagatgaccaggagggcccaagccagacaaaagccggagtggggagagaggcatttcagccagaccaacaggctgaaggagctgtgcagactattgctaaaatgagggttcgcagctgccaggagtcatcccagaacattgctacttatttattaaaaagctaaaaactagtgaaagcaagtaactgaaccagtgaactctgggtatcgataggttcgtcttaaataggccacttccccactcccccacccccccttgcttggtcttgtccttggtggctaagacttagctctgcaggggatgttaaagcacagttagtaggacgtggctctgcacagcccaaaaaccagcttactccttagccagggtgtgaggcctcgactatattcttcaaaatgtacttaggctctggttactgggatggccagtagatgtaatgcagatggttggagtttggggagggttaggaggcatcaagcaggacaaggtgctgctgagttcagagggcccacgttcaagggatggaggtggaacctggagaccgactcttaaaagcacagtccgtggttgggtgtggtggctcatgcctgtaagtaagtctcagccctttggaggccacagcagaaggattgcttgagcccaggtactcaaaccagcctgggcaacagagtgaggccctgtcaaaaaaaaatcagccttactgtgaagcctccaaggctgctcgcaggcagctgtggctctcgggaagggaggctgctttgcccagcagggaacatttggggcagggggtaaattttgccagtttgagcatcatgaggtgtaacaagaaatgggttgaatgggccaaatgcaaggagtgcatctctgggctgcaaactgacttgagtgctgcactattgctattccgtgcaaacaaaactcagcttttcctgactcagttccttgacttagtggcctttacaaaaaaagttgagtagtgtgtggcctgctgtcgcacagcccctagttagcttcatggtttctcagcttcagacccctccagcccacagaggagcccatggagggacccacttcccttggtccagacagctgggagtgggttaggcccactgctgttttgagcagggccacttgctccatttcactgaaggctttgctgggtgaaaacacttcagcatctcctcctcaggtcaacccataaagaccaggtccagcaccgtggtcttggcacatccctggcctcaggccctcacctaacagtgaggcagcagctgcccagccccgcaatgtgcctgctgtcaggcagctcttgcctgaaacttacttccacattctttcctgatgggcaggtggctgaaggcccagccatcagtgtcgcttgttgccaccccgtgcctcccttggcctctctgagctttgcccagaagaccaacaatcatacataccctaactgggacaccactctgcagaatgcagatgatccattctggaggaagctgtcccttgagctcagtgagctcccaggcaagcagggcatctggccgacttccctcacaacagctgctcccacatcccctcggactggagcttcagccctgactgaggtgggcagacctaagacctgagaccacaagattagctcagtgtctaccaagcatctagccactgtccagggccagagcataccacgtctgcagtgcctgtgagcagagccagcagttgccctgtgactgtaaccaccaaattgtccaaacacccgctgcagttagcaagaagggtaggcttcaccctcctttactgaggagaatgatgcggaggagtttcctctccagggctaggcaaggcaggcgagcagccagaagccgggtgcccacagggcagggacaggaaggctgtgctgctactggctgctcacttctccatcaacctcaccctctgcaccactaaccaagaccttgtcctcttgcctgtctcgctgctttcacagctgcaacgattgtgtctgcctcatggggttttcctccagagcctttattctgtagccagacgacacgaggagtctgtgtcactgagccagtgcttctagatgctaccctgtgtgggcggcacctcagggacagtaaatcagaaatgctggtcttgaaaccttgaaaagatcaagctgaatgttccttttcatctgtcgctgttgatcttcatctatttaaataggtattctaacgtttcctctctgtatttcatgaagctgatttcctctctctttccttttcagcaatactggagtaaccgcttcctaaaccattttgcagaaatgtaagggtgttcggttgcgtgcatgtgcgtttttagcaacacatctaccaaccctgtgcatgactgatgttggggaaaaagaaaagtaaaaaacttcccaactcactttgtgttatgtggaggaaatgtgtattaccaatggggttgttagcttttaaatcaaaatactgattacagatgtacaatttagcttaatcagaaagcctctccagagaagtttggtttctttgctgcaagaggaatgaggctctgtaaccttatctaagaacttggaagccgtcagccaagtcgccacatttctctgcaaaatgtcatagcttatataaatgtacagtattcaattgtaatgcatgccttcggttgtaagtagccagatccctctccagtgacattggaacatgctactttttaattggccctgtacagtttgcttatttataaattcattaaaaacactacaggtgttgaatggttaaaatgtaggcctccagttcattttcagttattttctgagtgtgcagacagctatttcgcactgtattaaatgtaacttatttaatgaaatcagaagcagtagacagatgttggtgcaatacaaatattgtgatgcatttatcttaataaaatgctaaatgtcaatttatcactgcgcatgtttgactttagactgtaaatagagatcagtttgtttctttctgtgctggtaacaatgagcgtcgcacagacatggtttcaggtaaataaatctattctatgataaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]