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Previous release (v1)
2024-04-28 00:00:16, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001410878 7684 bp mRNA linear PRI 04-JAN-2024
DEFINITION Homo sapiens tensin 3 (TNS3), transcript variant 2, mRNA.
ACCESSION NM_001410878 XM_011515477
VERSION NM_001410878.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7684)
AUTHORS Juilland M, Alouche N, Ubezzi I, Gonzalez M, Rashid HO, Scarpellino
L, Erdmann T, Grau M, Lenz G, Luther SA and Thome M.
TITLE Identification of Tensin-3 as a MALT1 substrate that controls B
cell adhesion and lymphoma dissemination
JOURNAL Proc Natl Acad Sci U S A 120 (52), e2301155120 (2023)
PUBMED 38109544
REMARK GeneRIF: Identification of Tensin-3 as a MALT1 substrate that
controls B cell adhesion and lymphoma dissemination.
REFERENCE 2 (bases 1 to 7684)
AUTHORS Zhang S, van de Peppel J, Koedam M, van Leeuwen JPTM and van der
Eerden BCJ.
TITLE Tensin-3 is involved in osteogenic versus adipogenic fate of human
bone marrow stromal cells
JOURNAL Cell Mol Life Sci 80 (9), 277 (2023)
PUBMED 37668682
REMARK GeneRIF: Tensin-3 is involved in osteogenic versus adipogenic fate
of human bone marrow stromal cells.
Publication Status: Online-Only
REFERENCE 3 (bases 1 to 7684)
AUTHORS Wu Y, Zhang HQ, Tang M, Guo C, Liu S, Li J, Wang Y, Xiao L and Yang
G.
TITLE Abnormal TNS3 gene methylation in patients with congenital
scoliosis
JOURNAL BMC Musculoskelet Disord 23 (1), 797 (2022)
PUBMED 35987623
REMARK GeneRIF: Abnormal TNS3 gene methylation in patients with congenital
scoliosis.
Publication Status: Online-Only
REFERENCE 4 (bases 1 to 7684)
AUTHORS Zuidema A, Atherton P, Kreft M, Hoekman L, Bleijerveld OB, Nagaraj
N, Chen N, Fassler R and Sonnenberg A.
TITLE PEAK1 Y635 phosphorylation regulates cell migration through
association with Tensin3 and integrins
JOURNAL J Cell Biol 221 (8) (2022)
PUBMED 35687021
REMARK GeneRIF: PEAK1 Y635 phosphorylation regulates cell migration
through association with Tensin3 and integrins.
REFERENCE 5 (bases 1 to 7684)
AUTHORS Park GC, Kim JM, Shin SC, Cheon YI, Sung ES, Lee M, Lee JC and Lee
BJ.
TITLE Tensin Regulates Fundamental Biological Processes by Interacting
with Integrins of Tonsil-Derived Mesenchymal Stem Cells
JOURNAL Cells 11 (15), 2333 (2022)
PUBMED 35954177
REMARK GeneRIF: Tensin Regulates Fundamental Biological Processes by
Interacting with Integrins of Tonsil-Derived Mesenchymal Stem
Cells.
Publication Status: Online-Only
REFERENCE 6 (bases 1 to 7684)
AUTHORS Liao YC, Si L, deVere White RW and Lo SH.
TITLE The phosphotyrosine-independent interaction of DLC-1 and the SH2
domain of cten regulates focal adhesion localization and growth
suppression activity of DLC-1
JOURNAL J Cell Biol 176 (1), 43-49 (2007)
PUBMED 17190795
REFERENCE 7 (bases 1 to 7684)
AUTHORS Maeda I, Takano T, Yoshida H, Matsuzuka F, Amino N and Miyauchi A.
TITLE Tensin3 is a novel thyroid-specific gene
JOURNAL J Mol Endocrinol 36 (1), R1-R8 (2006)
PUBMED 16461921
REMARK Review article
REFERENCE 8 (bases 1 to 7684)
AUTHORS Jones RB, Gordus A, Krall JA and MacBeath G.
TITLE A quantitative protein interaction network for the ErbB receptors
using protein microarrays
JOURNAL Nature 439 (7073), 168-174 (2006)
PUBMED 16273093
REFERENCE 9 (bases 1 to 7684)
AUTHORS Cui Y, Liao YC and Lo SH.
TITLE Epidermal growth factor modulates tyrosine phosphorylation of a
novel tensin family member, tensin3
JOURNAL Mol Cancer Res 2 (4), 225-232 (2004)
PUBMED 15140944
REMARK GeneRIF: Tensin3 may function as a platform for the disassembly of
EGF-related signaling complexes at focal adhesions.
REFERENCE 10 (bases 1 to 7684)
AUTHORS Carson-Walter EB, Watkins DN, Nanda A, Vogelstein B, Kinzler KW and
St Croix B.
TITLE Cell surface tumor endothelial markers are conserved in mice and
humans
JOURNAL Cancer Res 61 (18), 6649-6655 (2001)
PUBMED 11559528
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AC092000.3 and AC073341.10.
On Aug 17, 2022 this sequence version replaced XM_011515477.3.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR14038191.2639813.1,
SRR14038194.252582.1 [ECO:0000332]
RNAseq introns :: mixed sample support SAMEA1965299,
SAMEA1966682 [ECO:0006172]
##Evidence-Data-END##
COMPLETENESS: full length.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-160 AC092000.3 134466-134625 c
161-272 AC092000.3 81075-81186 c
273-310 AC092000.3 58946-58983 c
311-349 AC092000.3 33142-33180 c
350-402 AC073341.10 177616-177668 c
403-574 AC073341.10 175100-175271 c
575-625 AC073341.10 172876-172926 c
626-748 AC073341.10 170895-171017 c
749-813 AC073341.10 163925-163989 c
814-897 AC073341.10 159714-159797 c
898-1010 AC073341.10 150707-150819 c
1011-1071 AC073341.10 149550-149610 c
1072-1147 AC073341.10 147340-147415 c
1148-1277 AC073341.10 136397-136526 c
1278-1343 AC073341.10 136005-136070 c
1344-1448 AC073341.10 132412-132516 c
1449-2705 AC073341.10 103977-105233 c
2706-2875 AC073341.10 81800-81969 c
2876-2990 AC073341.10 80537-80651 c
2991-3074 AC073341.10 80368-80451 c
3075-3246 AC073341.10 40445-40616 c
3247-3881 AC073341.10 38563-39197 c
3882-3968 AC073341.10 37799-37885 c
3969-4100 AC073341.10 32695-32826 c
4101-4196 AC073341.10 29346-29441 c
4197-4274 AC073341.10 28441-28518 c
4275-4352 AC073341.10 27568-27645 c
4353-4521 AC073341.10 19310-19478 c
4522-4590 AC073341.10 15899-15967 c
4591-4617 AC073341.10 15777-15803 c
4618-7684 AC073341.10 10767-13833 c
FEATURES Location/Qualifiers
source 1..7684
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="7"
/map="7p12.3"
gene 1..7684
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="tensin 3"
/db_xref="GeneID:64759"
/db_xref="HGNC:HGNC:21616"
/db_xref="MIM:606825"
exon 1..160
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
misc_feature 92..94
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="upstream in-frame stop codon"
CDS 116..4762
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="isoform 2 is encoded by transcript variant 2;
tensin-like SH2 domain containing 1; tumor endothelial
marker 6; thyroid specific PTB domain protein; tensin-like
SH2 domain-containing protein 1"
/codon_start=1
/product="tensin-3 isoform 2"
/protein_id="NP_001397807.1"
/db_xref="CCDS:CCDS94100.1"
/db_xref="GeneID:64759"
/db_xref="HGNC:HGNC:21616"
/db_xref="MIM:606825"
/translation="
MNWLCRNQDPNPPPQPEELTSSLHAFKNKAFKKSKVCGVCKQIIDGQGISCRACKYSCHKKCEAKVVIPCGVQVRLEQAPGSSTLSSSLCRDKPLRPVILSPTMEEGHGLDLTYITERIIAVSFPAGCSEESYLHNLQEVTRMLKSKHGDNYLVLNLSEKRYDLTKLNPKIMDVGWPELHAPPLDKMCTICKAQESWLNSNLQHVVVIHCRGGKGRIGVVISSYMHFTNVSASADQALDRFAMKKFYDDKVSALMQPSQKRYVQFLSGLLSGSVKMNASPLFLHFVILHGTPNFDTGGVCRPFLKLYQAMQPVYTSGIYNVGPENPSRICIVIEPAQLLKGDVMVKCYHKKYRSATRDVIFRLQFHTGAVQGYGLVFGKEDLDNASKDDRFPDYGKVELVFSATPEKIQGSEHLYNDHGVIVDYNTTDPLIRWDSYENLSADGEVLHTQGPVDGSLYAKVRKKSSSDPGIPGGPQAIPATNSPDHSDHTLSVSSDSGHSTASARTDKTEERLAPGTRRGLSAQEKAELDQLLSGFGLEDPGSSLKEMTDARSKYSGTRHVVPAQVHVNGDAALKDRETDILDDEMPHHDLHSVDSLGTLSSSEGPQSAHLGPFTCHKSSQNSLLSDGFGSNVGEDPQGTLVPDLGLGMDGPYERERTFGSREPKQPQPLLRKPSVSAQMQAYGQSSYSTQTWVRQQQMVVAHQYSFAPDGEARLVSRCPADNPGLVQAQPRVPLTPTRGTSSRVAVQRGVGSGPHPPDTQQPSPSKAFKPRFPGDQVVNGAGPELSTGPSPGSPTLDIDQSIEQLNRLILELDPTFEPIPTHMNALGSQANGSVSPDSVGGGLRASSRLPDTGEGPSRATGRQGSSAEQPLGGRLRKLSLGQYDNDAGGQLPFSKCAWGKAGVDYAPNLPPFPSPADVKETMTPGYPQDLDIIDGRILSSKESMCSTPAFPVSPETPYVKTALRHPPFSPPEPPLSSPASQHKGGREPRSCPETLTHAVGMSESPIGPKSTMLRADASSTPSFQQAFASSCTISSNGPGQRRESSSSAERQWVESSPKPMVSLLGSGRPTGSPLSAEFSGTRKDSPVLSCFPPSELQAPFHSHELSLAEPPDSLAPPSSQAFLGFGTAPVGSGLPPEEDLGALLANSHGASPTPSIPLTATGAADNGFLSHNFLTVAPGHSSHHSPGLQGQGVTLPGQPPLPEKKRASEGDRSLGSVSPSSSGFSSPHSGSTISIPFPNVLPDFSKASEAASPLPDSPGDKLVIVKFVQDTSKFWYKADISREQAIAMLKDKEPGSFIVRDSHSFRGAYGLAMKVATPPPSVLQLNKKAGDLANELVRHFLIECTPKGVRLKGCSNEPYFGSLTALVCQHSITPLALPCKLLIPERDPLEEIAESSPQTAANSAAELLKQGAACNVWYLNSVEMESLTGHQAIQKALSITLVQEPPPVSTVVHFKVSAQGITLTDNQRKLFFRRHYPVNSVIFCALDPQDRKWIKDGPSSKVFGFVARKQGSATDNVCHLFAEHDPEQPASAIVNFVSKVMIGSPKKV"
misc_feature 179..346
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="protein kinase C conserved region 1 (C1 domain)
found in tensin-3 (TNS3) variant and similar proteins;
Region: C1_TNS3_v; cd20889"
/db_xref="CDD:410439"
misc_feature 446..922
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="protein tyrosine phosphatase-like domain of
tensin-3; Region: PTP_tensin-3; cd14561"
/db_xref="CDD:350409"
misc_feature 941..1321
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="C2 domain of PTEN tumor-suppressor protein; Region:
PTEN_C2; pfam10409"
/db_xref="CDD:431265"
misc_feature <2294..3598
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="large tegument protein UL36; Provisional; Region:
PHA03247"
/db_xref="CDD:223021"
misc_feature 3926..4276
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="Src homology 2 domain found in Tensin-like
proteins; Region: SH2_Tensin_like; cd09927"
/db_xref="CDD:198181"
misc_feature order(3959..3961,4013..4015,4130..4132,4136..4138)
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="phosphotyrosine binding pocket [polypeptide
binding]; other site"
/db_xref="CDD:198181"
misc_feature order(4133..4135,4223..4225)
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="hydrophobic binding pocket [polypeptide binding];
other site"
/db_xref="CDD:198181"
misc_feature 4346..4741
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="Tensin Phosphotyrosine-binding (PTB) domain;
Region: PTB_tensin; cd01213"
/db_xref="CDD:269924"
misc_feature order(4364..4366,4616..4618,4679..4681)
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="putative phosphoinositide binding site [chemical
binding]; other site"
/db_xref="CDD:269924"
misc_feature order(4556..4573,4637..4639,4706..4708,4718..4720)
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="putative peptide binding site [polypeptide
binding]; other site"
/db_xref="CDD:269924"
exon 161..272
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 273..310
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 311..349
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 350..402
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 403..574
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 575..625
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 626..748
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 749..813
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 814..897
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 898..1010
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1011..1071
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1072..1147
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1148..1277
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1278..1343
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1344..1448
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1449..2705
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 2706..2875
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 2876..2990
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 2991..3074
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 3075..3246
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 3247..3881
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 3882..3968
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 3969..4100
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4101..4196
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4197..4274
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4275..4352
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4353..4521
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4522..4590
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4591..4617
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4618..7684
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
regulatory 7663..7668
/regulatory_class="polyA_signal_sequence"
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="hexamer: AATAAA"
polyA_site 7684
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="major polyA site"
ORIGIN
ccggagcggctgtgctcctttatgtatgcgcgactcccactaggctatgagctacaggagggagggtaggtcttgctcccggagagcaccttaatcacaggcgctgaatgaaagaatgaactggttgtgcaggaaccaggatccgaacccgcctccccagccggaagaattaacctcgagtctgcacgcttttaagaacaaggcctttaaaaaatccaaagtgtgtggagtttgcaaacaaattattgacggtcaaggtatttcatgccgagcctgcaagtattcctgccacaagaaatgtgaagccaaggtggtgattccctgcggtgtgcaagtccgactggaacaggctccagggagttccacgctgtccagttctctctgccgtgataaacctctgcggcccgtcatcctgagtcccaccatggaggagggccatgggctggacctcacttacatcacggagcgcatcatcgctgtgtccttccctgccggctgctctgaggagtcctacctgcacaacctacaggaggtcacgcgcatgctcaagtccaagcacggggacaactacctggtattaaacctttcagaaaagagatatgaccttacgaagcttaacccaaagatcatggatgtgggctggccagagctccacgcaccgcccctggataagatgtgtaccatatgcaaggcgcaggagtcctggctgaacagcaacctccagcatgtggtcgtcattcactgcaggggcgggaaaggacgcataggagtggtcatatcatcctacatgcatttcaccaacgtctcagccagcgccgaccaggcccttgacaggtttgcaatgaagaagttttatgatgacaaagtttcagctttaatgcagccttcccaaaaacggtatgttcagttcctcagtgggctcctgtccggatcggtgaaaatgaatgcctctcccctgttcctgcattttgtcatcctccacggcacccccaacttcgacacaggtggagtgtgccggccctttctgaagctctaccaagccatgcagcctgtgtacacctccgggatctacaacgttggcccagaaaaccccagcaggatctgcatcgtcatcgagccggcccagcttctgaagggagatgtcatggtgaaatgctaccacaagaaataccgctcggccacccgtgacgtcattttccgcctgcagtttcacactggggctgtgcagggctacgggctggtgtttgggaaggaggatctggacaatgccagcaaagatgaccgttttcctgactatgggaaggttgaattagtcttctctgccacgcctgagaagattcaagggtccgaacacttgtacaacgaccacggtgtgattgtggactacaacacaacagacccactgatacgctgggactcgtacgagaacctcagtgcagatggagaagtgctacacacgcagggccctgtcgatggcagcctttacgcgaaggtgaggaagaaaagctcctcggatcctggcatcccaggtggcccccaggcaatcccggccaccaacagcccagaccacagtgaccacaccttgtctgtcagcagtgactccggccactctacagcctctgccaggacggataagacggaagagcgcctggccccaggaaccaggaggggcctgagtgcccaggagaaggcagagttggaccagctgctcagtggctttggcctggaagatcctggaagctccctcaaggaaatgactgatgctcgaagcaagtacagtgggacccgccacgtggtgccagcccaggttcacgtgaatggagacgctgctctgaaggatcgggagacagacattctggatgacgagatgccccaccacgacctgcacagtgtggacagccttgggaccctgtcctcctcggaagggcctcagtcggcccacctgggtcccttcacctgccacaagagcagccagaactcactcctatctgacggttttggcagcaacgttggtgaagatccgcagggcaccctcgttccggacctgggccttggcatggacggcccctatgagcgggagcggacttttgggagtcgagagcccaagcagccccagcccctgctgagaaagccctcagtgtccgcccagatgcaggcctatgggcagagcagctactccacacagacctgggtgcgccagcagcagatggttgtagctcaccagtatagcttcgccccagatggggaggcccggctggtgagccgctgccctgcagacaatcctggcctcgtccaggcccagcccagagtgccactcacccccacccgagggaccagcagtagggtggctgtccagaggggtgtaggcagtgggccacatccccctgacacacagcagccctctcccagcaaagcgttcaaacccaggtttccaggagaccaggttgtgaatggagccggcccagagctgagcacaggcccctccccaggctcgcccaccctggacatcgaccagtccatcgagcagctcaacaggctgatcctggagctggatcccaccttcgagcccatccctacccacatgaacgccctcggtagccaggccaatggctctgtgtctccagacagcgtgggaggtgggctccgggcaagcagcaggctgcctgacacaggagagggccccagcagggccaccgggcggcaaggctcctctgctgaacagcccctgggcgggagactcaggaagctgagcctggggcagtacgacaacgatgctggggggcagctgcccttctccaaatgtgcatggggaaaggctggtgtggactatgccccaaacctgccgccattcccctcaccagcggacgtcaaagagacgatgacccctggctatccccaggacctcgatattatcgatggcagaattttaagtagcaaggagtccatgtgttcaactccagcatttcctgtgtctccagagacaccgtatgtgaaaacagcgctgcgccatcctccgttcagcccacctgagcccccgctgagcagcccagccagtcagcacaaaggaggacgtgaaccacgaagctgccctgagacgctcactcacgctgtggggatgtcagagagccccatcggacccaaatccacgatgctccgggctgatgcgtcctcgacgccctcctttcagcaggcttttgcttcttcctgcaccatttccagcaacggccctgggcagaggagagagagctcctcttctgcagaacgccagtgggtggagagcagccccaagcccatggtttccctgctggggagcggccggcccaccggaagtcccctcagcgctgagttctccggtaccaggaaggactccccagtgctgtcctgcttcccgccgtcagagctccaggctcctttccacagccatgagctgtccctagcagagccaccggactccctggcgcctcccagcagccaggccttcctgggcttcggcaccgccccagtgggaagtggccttccgcccgaggaggacctgggggccttgctggccaattctcatggagcgtcaccgacccccagcatcccgctgacagcgacaggggctgccgacaatggcttcctgtcccacaactttctcacggtggcgcctggacacagcagccaccacagtccaggcctgcagggccagggtgtgaccctgcccgggcagccacccctccctgagaagaagcgggcctcggagggggatcgttctttgggctcagtctctccctcctccagtggcttctccagcccgcacagcgggagcaccatcagtatccccttcccaaatgtccttcccgacttttccaaggcttcagaagcggcctcacctctgccagatagtccaggtgataaacttgtgatcgtgaaatttgttcaagacacttccaagttctggtacaaggcggatatttcaagagaacaagccatcgccatgttgaaggacaaggagccgggctcattcattgttcgagacagccattccttccgaggggcctatggcctggccatgaaggtggccacgcccccaccttcagtcctgcagctgaacaagaaagctggagatttggccaatgaactcgtccggcactttttgatcgagtgtaccccgaagggagtgcggttgaaagggtgctcgaatgaaccatatttcgggagcctgacggccttggtgtgccagcattccatcacgcccttggccttgccgtgcaagctgcttatcccagagagagatccattggaggaaatagcagaaagttctccccagacggcagccaattcagcagctgagctgttgaagcagggggcagcctgcaatgtgtggtacttgaactctgtggagatggagtccctcaccggccaccaggcgatccagaaggccctgagcatcaccctggtccaggagcctccacctgtgtccacagttgtgcacttcaaggtgtcagcccagggcatcaccctgacagacaatcagaggaagctcttcttccggaggcattaccccgtgaacagtgtgattttctgtgccttggacccacaagacaggaagtggatcaaagatggcccttcctcaaaagtctttggatttgtggcccggaagcagggcagtgccacggataatgtgtgccacctgtttgcagagcatgaccctgagcagcctgccagtgccattgtcaacttcgtatcaaaggtcatgattggttccccaaagaaggtctgagaactcccctccctccctggacccaccgatgcctctcgaagccctggagacagccgttgggtgagggtggggcccccactttttaccaaactagtaaacctgacattccaggcccatgaggggaaagaggatcttccagctctgcaaaaacaagaacaaacaacatcaccgtgaattggcctttcctgaaagtgacttatctgacacatctctgtagccacatgctttttgggtagaagaagctgggcatgggtgcaccccaccccctagggtccccatgggaaagggacatgcaaggaaacagcacagaacacgaggtggtccccatgtccctggcacactagcattccgggggatgaggaatccccagcccttgaggcagaggtgccgagtgactgccatgcttcgcccgtccgcatgggcgcttctgtccagctgcacccgaggccgggggtttccctcacctcggtcttcccaagatggagatgctaacgaaactgagaagggggcgtatgtttgacgaaggtttgtgcaagtcaggcccttctggaacacagcagggcctacaacgaggggcctttgcgatgggctgtgaggatgggggtggtgggaagaattggccacgttggagaccccatgccaccccaccatggtgagtgctctgtgcctcctgctcacctgtggtgagctgggcgagctgggcgagctgggcgagctgggctggggagagcctgtgaggaccgagaggagaaatgagaagaaggaacaaaaatattatttctatgtaatttatattttacttatgccaaattatttatgataatttgccattgctatactgtaccagtgtcaaatgctgcagcctgccaagctgtgattttgtgaggcttgtccctatgtaggatgcaccgcaggcccctggccactgaaagagtgtgcagtggactgtgggtctcccatatgcggtgccgcccaaaggtggctttgcctcaagcaacctaccctgatgttttactcattggaatgtttttccccgattgtggatgacttcttttctgatggagagagtccaggagggatggaaaactcctggatttaagctcagcatcccccacatgggcttttcgatcatcttcaggcctgaagctgcacgacctgaagttcgcctgcatttatcagccctctttgtgctgctccttgccaccttggggttcctgctggggaccatgtgtggttgtggcatgtgtgagcagaagggaggatgaggaaaaagagaagaaaccccggtactgacaagctgtttttgagtgccactgtttgccatcatctaagccactgaatcaagtgtatttcaggcttatttcaacattccaatgccctggttttcctgcttgaatctgttcgtggtcaaaggtttgggggaatttgtgaccctggaacatccccagagtgaaagatggagctgggccacatcagaataaggccttggccccatcctctcacagcctaggtgctctgcaggcatgctgactgtcctgattgcgatccagcccgaaattccctcctctgctttcaaaagtcaaatcccccattcttaggccacactggtgtcacaagctcctgtcagggagctggggtttgggaatgtgctttgtgaactctgctttaaagtgaggggccgaggaaaacttagaaacaggcagagttggaagcagccaaatcacagtgggtgttgtgtgtgtgtgcgtgtgtgcatgcgtgcgtgtatgcgtgtgtgaaagcaggtggaccattccactttttagctcctattgatgcaccaaaccaagtgcctcatttctgtgccaaatgtttgccttggtcgttgtggacctccttctctaacttgcggtggcatgactgtcaggaggtgctggcattttcagcagatcctcatgtgttgaccctgatgtctttagcagaggcctctagcatctcggtttttcatccactgcaggaatgtggccacagggagcagaggtttgtactttccccaagaggtcctcatcctgagacggtctctacccatgtttaacccaaagagtgcaggccaggttccttatccttctgatgaaggatgagagagctcatttagaagtcagagcaaactagggtctcagtattgagaaacgcagcctgccagggaatcacagagacatcggggtgcccgcgatggccctcatgaagccatgcctcgacggcattcaggaagccctgcaaacgtgctttttgaactcattggccaggtgtgatttttacacaaggtaaacgtggtcaagggcatcggggaatttgctccaagcagatagctccctctgaggaaccaaaggaagcaagtttccacgatttctgaagagctggtataggaagtttctttcttccttttgtgttacatgtgcattaaacagaacaagctgtgtgtcatcacagattgtactgtgggctcagaaaccgtgagagagcccccaccgtggacaccggctctagggccacaggaaaaggaacgtttccaggcattttgtctccagggctcccgctggacaggcacgtactgccctggggagtaaatgcggagagttcacgaactgtgcccaacgcatgttatagccagggtcctactaactactcagtaaaagaacgtattgttgtattcctccagtgttaagctatagccatgttaaaagtcactgtgcatttattctcagcatcaaataccttgtaacgtcttctctgccttgttagtgcatatttttacttttctgatactgtaaagaatatatccagtatgtaaatgaatgttctataaatcttttgtatagtcattttctctgctccttaaatatcatctctattcagagtataataaaattatgaacttggtaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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