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Previous release (v1)
2024-04-28 23:09:46, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001410877 7967 bp mRNA linear PRI 04-JAN-2024
DEFINITION Homo sapiens tensin 3 (TNS3), transcript variant 1, mRNA.
ACCESSION NM_001410877 XM_017012538
VERSION NM_001410877.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7967)
AUTHORS Juilland M, Alouche N, Ubezzi I, Gonzalez M, Rashid HO, Scarpellino
L, Erdmann T, Grau M, Lenz G, Luther SA and Thome M.
TITLE Identification of Tensin-3 as a MALT1 substrate that controls B
cell adhesion and lymphoma dissemination
JOURNAL Proc Natl Acad Sci U S A 120 (52), e2301155120 (2023)
PUBMED 38109544
REMARK GeneRIF: Identification of Tensin-3 as a MALT1 substrate that
controls B cell adhesion and lymphoma dissemination.
REFERENCE 2 (bases 1 to 7967)
AUTHORS Zhang S, van de Peppel J, Koedam M, van Leeuwen JPTM and van der
Eerden BCJ.
TITLE Tensin-3 is involved in osteogenic versus adipogenic fate of human
bone marrow stromal cells
JOURNAL Cell Mol Life Sci 80 (9), 277 (2023)
PUBMED 37668682
REMARK GeneRIF: Tensin-3 is involved in osteogenic versus adipogenic fate
of human bone marrow stromal cells.
Publication Status: Online-Only
REFERENCE 3 (bases 1 to 7967)
AUTHORS Wu Y, Zhang HQ, Tang M, Guo C, Liu S, Li J, Wang Y, Xiao L and Yang
G.
TITLE Abnormal TNS3 gene methylation in patients with congenital
scoliosis
JOURNAL BMC Musculoskelet Disord 23 (1), 797 (2022)
PUBMED 35987623
REMARK GeneRIF: Abnormal TNS3 gene methylation in patients with congenital
scoliosis.
Publication Status: Online-Only
REFERENCE 4 (bases 1 to 7967)
AUTHORS Zuidema A, Atherton P, Kreft M, Hoekman L, Bleijerveld OB, Nagaraj
N, Chen N, Fassler R and Sonnenberg A.
TITLE PEAK1 Y635 phosphorylation regulates cell migration through
association with Tensin3 and integrins
JOURNAL J Cell Biol 221 (8) (2022)
PUBMED 35687021
REMARK GeneRIF: PEAK1 Y635 phosphorylation regulates cell migration
through association with Tensin3 and integrins.
REFERENCE 5 (bases 1 to 7967)
AUTHORS Park GC, Kim JM, Shin SC, Cheon YI, Sung ES, Lee M, Lee JC and Lee
BJ.
TITLE Tensin Regulates Fundamental Biological Processes by Interacting
with Integrins of Tonsil-Derived Mesenchymal Stem Cells
JOURNAL Cells 11 (15), 2333 (2022)
PUBMED 35954177
REMARK GeneRIF: Tensin Regulates Fundamental Biological Processes by
Interacting with Integrins of Tonsil-Derived Mesenchymal Stem
Cells.
Publication Status: Online-Only
REFERENCE 6 (bases 1 to 7967)
AUTHORS Liao YC, Si L, deVere White RW and Lo SH.
TITLE The phosphotyrosine-independent interaction of DLC-1 and the SH2
domain of cten regulates focal adhesion localization and growth
suppression activity of DLC-1
JOURNAL J Cell Biol 176 (1), 43-49 (2007)
PUBMED 17190795
REFERENCE 7 (bases 1 to 7967)
AUTHORS Maeda I, Takano T, Yoshida H, Matsuzuka F, Amino N and Miyauchi A.
TITLE Tensin3 is a novel thyroid-specific gene
JOURNAL J Mol Endocrinol 36 (1), R1-R8 (2006)
PUBMED 16461921
REMARK Review article
REFERENCE 8 (bases 1 to 7967)
AUTHORS Jones RB, Gordus A, Krall JA and MacBeath G.
TITLE A quantitative protein interaction network for the ErbB receptors
using protein microarrays
JOURNAL Nature 439 (7073), 168-174 (2006)
PUBMED 16273093
REFERENCE 9 (bases 1 to 7967)
AUTHORS Cui Y, Liao YC and Lo SH.
TITLE Epidermal growth factor modulates tyrosine phosphorylation of a
novel tensin family member, tensin3
JOURNAL Mol Cancer Res 2 (4), 225-232 (2004)
PUBMED 15140944
REMARK GeneRIF: Tensin3 may function as a platform for the disassembly of
EGF-related signaling complexes at focal adhesions.
REFERENCE 10 (bases 1 to 7967)
AUTHORS Carson-Walter EB, Watkins DN, Nanda A, Vogelstein B, Kinzler KW and
St Croix B.
TITLE Cell surface tumor endothelial markers are conserved in mice and
humans
JOURNAL Cancer Res 61 (18), 6649-6655 (2001)
PUBMED 11559528
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AC092000.3 and AC073341.10.
On Aug 17, 2022 this sequence version replaced XM_017012538.2.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR14038197.1110870.1,
SRR14372080.1790880.1 [ECO:0000332]
RNAseq introns :: mixed sample support SAMEA1965299,
SAMEA1966682 [ECO:0006172]
##Evidence-Data-END##
COMPLETENESS: full length.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-443 AC092000.3 89069-89511 c
444-555 AC092000.3 81075-81186 c
556-593 AC092000.3 58946-58983 c
594-632 AC092000.3 33142-33180 c
633-685 AC073341.10 177616-177668 c
686-857 AC073341.10 175100-175271 c
858-908 AC073341.10 172876-172926 c
909-1031 AC073341.10 170895-171017 c
1032-1096 AC073341.10 163925-163989 c
1097-1180 AC073341.10 159714-159797 c
1181-1293 AC073341.10 150707-150819 c
1294-1354 AC073341.10 149550-149610 c
1355-1430 AC073341.10 147340-147415 c
1431-1560 AC073341.10 136397-136526 c
1561-1626 AC073341.10 136005-136070 c
1627-1731 AC073341.10 132412-132516 c
1732-2988 AC073341.10 103977-105233 c
2989-3158 AC073341.10 81800-81969 c
3159-3273 AC073341.10 80537-80651 c
3274-3357 AC073341.10 80368-80451 c
3358-3529 AC073341.10 40445-40616 c
3530-4164 AC073341.10 38563-39197 c
4165-4251 AC073341.10 37799-37885 c
4252-4383 AC073341.10 32695-32826 c
4384-4479 AC073341.10 29346-29441 c
4480-4557 AC073341.10 28441-28518 c
4558-4635 AC073341.10 27568-27645 c
4636-4804 AC073341.10 19310-19478 c
4805-4873 AC073341.10 15899-15967 c
4874-4900 AC073341.10 15777-15803 c
4901-7967 AC073341.10 10767-13833 c
FEATURES Location/Qualifiers
source 1..7967
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="7"
/map="7p12.3"
gene 1..7967
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="tensin 3"
/db_xref="GeneID:64759"
/db_xref="HGNC:HGNC:21616"
/db_xref="MIM:606825"
exon 1..443
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
misc_feature 150..152
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="upstream in-frame stop codon"
CDS 366..5045
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="isoform 1 is encoded by transcript variant 1;
tensin-like SH2 domain containing 1; tumor endothelial
marker 6; thyroid specific PTB domain protein; tensin-like
SH2 domain-containing protein 1"
/codon_start=1
/product="tensin-3 isoform 1"
/protein_id="NP_001397806.1"
/db_xref="CCDS:CCDS94098.1"
/db_xref="GeneID:64759"
/db_xref="HGNC:HGNC:21616"
/db_xref="MIM:606825"
/translation="
MRLRALTPGPPGGFARGTRSRRRRRQPEELTSSLHAFKNKAFKKSKVCGVCKQIIDGQGISCRACKYSCHKKCEAKVVIPCGVQVRLEQAPGSSTLSSSLCRDKPLRPVILSPTMEEGHGLDLTYITERIIAVSFPAGCSEESYLHNLQEVTRMLKSKHGDNYLVLNLSEKRYDLTKLNPKIMDVGWPELHAPPLDKMCTICKAQESWLNSNLQHVVVIHCRGGKGRIGVVISSYMHFTNVSASADQALDRFAMKKFYDDKVSALMQPSQKRYVQFLSGLLSGSVKMNASPLFLHFVILHGTPNFDTGGVCRPFLKLYQAMQPVYTSGIYNVGPENPSRICIVIEPAQLLKGDVMVKCYHKKYRSATRDVIFRLQFHTGAVQGYGLVFGKEDLDNASKDDRFPDYGKVELVFSATPEKIQGSEHLYNDHGVIVDYNTTDPLIRWDSYENLSADGEVLHTQGPVDGSLYAKVRKKSSSDPGIPGGPQAIPATNSPDHSDHTLSVSSDSGHSTASARTDKTEERLAPGTRRGLSAQEKAELDQLLSGFGLEDPGSSLKEMTDARSKYSGTRHVVPAQVHVNGDAALKDRETDILDDEMPHHDLHSVDSLGTLSSSEGPQSAHLGPFTCHKSSQNSLLSDGFGSNVGEDPQGTLVPDLGLGMDGPYERERTFGSREPKQPQPLLRKPSVSAQMQAYGQSSYSTQTWVRQQQMVVAHQYSFAPDGEARLVSRCPADNPGLVQAQPRVPLTPTRGTSSRVAVQRGVGSGPHPPDTQQPSPSKAFKPRFPGDQVVNGAGPELSTGPSPGSPTLDIDQSIEQLNRLILELDPTFEPIPTHMNALGSQANGSVSPDSVGGGLRASSRLPDTGEGPSRATGRQGSSAEQPLGGRLRKLSLGQYDNDAGGQLPFSKCAWGKAGVDYAPNLPPFPSPADVKETMTPGYPQDLDIIDGRILSSKESMCSTPAFPVSPETPYVKTALRHPPFSPPEPPLSSPASQHKGGREPRSCPETLTHAVGMSESPIGPKSTMLRADASSTPSFQQAFASSCTISSNGPGQRRESSSSAERQWVESSPKPMVSLLGSGRPTGSPLSAEFSGTRKDSPVLSCFPPSELQAPFHSHELSLAEPPDSLAPPSSQAFLGFGTAPVGSGLPPEEDLGALLANSHGASPTPSIPLTATGAADNGFLSHNFLTVAPGHSSHHSPGLQGQGVTLPGQPPLPEKKRASEGDRSLGSVSPSSSGFSSPHSGSTISIPFPNVLPDFSKASEAASPLPDSPGDKLVIVKFVQDTSKFWYKADISREQAIAMLKDKEPGSFIVRDSHSFRGAYGLAMKVATPPPSVLQLNKKAGDLANELVRHFLIECTPKGVRLKGCSNEPYFGSLTALVCQHSITPLALPCKLLIPERDPLEEIAESSPQTAANSAAELLKQGAACNVWYLNSVEMESLTGHQAIQKALSITLVQEPPPVSTVVHFKVSAQGITLTDNQRKLFFRRHYPVNSVIFCALDPQDRKWIKDGPSSKVFGFVARKQGSATDNVCHLFAEHDPEQPASAIVNFVSKVMIGSPKKV"
misc_feature 462..629
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="protein kinase C conserved region 1 (C1 domain)
found in tensin-3 (TNS3) variant and similar proteins;
Region: C1_TNS3_v; cd20889"
/db_xref="CDD:410439"
misc_feature 729..1205
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="protein tyrosine phosphatase-like domain of
tensin-3; Region: PTP_tensin-3; cd14561"
/db_xref="CDD:350409"
misc_feature 1224..1604
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="C2 domain of PTEN tumor-suppressor protein; Region:
PTEN_C2; pfam10409"
/db_xref="CDD:431265"
misc_feature <2577..3881
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="large tegument protein UL36; Provisional; Region:
PHA03247"
/db_xref="CDD:223021"
misc_feature 4209..4559
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="Src homology 2 domain found in Tensin-like
proteins; Region: SH2_Tensin_like; cd09927"
/db_xref="CDD:198181"
misc_feature order(4242..4244,4296..4298,4413..4415,4419..4421)
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="phosphotyrosine binding pocket [polypeptide
binding]; other site"
/db_xref="CDD:198181"
misc_feature order(4416..4418,4506..4508)
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="hydrophobic binding pocket [polypeptide binding];
other site"
/db_xref="CDD:198181"
misc_feature 4629..5024
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="Tensin Phosphotyrosine-binding (PTB) domain;
Region: PTB_tensin; cd01213"
/db_xref="CDD:269924"
misc_feature order(4647..4649,4899..4901,4962..4964)
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="putative phosphoinositide binding site [chemical
binding]; other site"
/db_xref="CDD:269924"
misc_feature order(4839..4856,4920..4922,4989..4991,5001..5003)
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="putative peptide binding site [polypeptide
binding]; other site"
/db_xref="CDD:269924"
exon 444..555
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 556..593
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 594..632
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 633..685
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 686..857
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 858..908
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 909..1031
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1032..1096
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1097..1180
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1181..1293
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1294..1354
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1355..1430
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1431..1560
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1561..1626
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1627..1731
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 1732..2988
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 2989..3158
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 3159..3273
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 3274..3357
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 3358..3529
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 3530..4164
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4165..4251
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4252..4383
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4384..4479
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4480..4557
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4558..4635
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4636..4804
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4805..4873
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4874..4900
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
exon 4901..7967
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/inference="alignment:Splign:2.1.0"
regulatory 7946..7951
/regulatory_class="polyA_signal_sequence"
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="hexamer: AATAAA"
polyA_site 7967
/gene="TNS3"
/gene_synonym="TEM6; TENS1"
/note="major polyA site"
ORIGIN
agtgtttggcggctcagcctgtgcctccgcgctcgctcggagctgcggttggggcgggcgggggagggagggctaattcgtgtcagatggagggacgccgtgcgggaccgtgcgctcgcgcctggcttttgttcccggcgtctgacttctgacgggcaggagtggccgtggaggctgcggcgcgcggctgggacctgggccggcggccacggagagcccttggcccctcccgtgttggccatttcctgggacttgtgtccgcaggggactcgggaggcatcctccccccagatagccgctggggaggggtcagcggccaccctcgcccggccgagcccggctccccgcgggcggcaggggcagccatgaggctgcgcgccctgacccctgggccaccgggagggttcgcgcgcggaacccggtcgcgccggcgccggcgccagccggaagaattaacctcgagtctgcacgcttttaagaacaaggcctttaaaaaatccaaagtgtgtggagtttgcaaacaaattattgacggtcaaggtatttcatgccgagcctgcaagtattcctgccacaagaaatgtgaagccaaggtggtgattccctgcggtgtgcaagtccgactggaacaggctccagggagttccacgctgtccagttctctctgccgtgataaacctctgcggcccgtcatcctgagtcccaccatggaggagggccatgggctggacctcacttacatcacggagcgcatcatcgctgtgtccttccctgccggctgctctgaggagtcctacctgcacaacctacaggaggtcacgcgcatgctcaagtccaagcacggggacaactacctggtattaaacctttcagaaaagagatatgaccttacgaagcttaacccaaagatcatggatgtgggctggccagagctccacgcaccgcccctggataagatgtgtaccatatgcaaggcgcaggagtcctggctgaacagcaacctccagcatgtggtcgtcattcactgcaggggcgggaaaggacgcataggagtggtcatatcatcctacatgcatttcaccaacgtctcagccagcgccgaccaggcccttgacaggtttgcaatgaagaagttttatgatgacaaagtttcagctttaatgcagccttcccaaaaacggtatgttcagttcctcagtgggctcctgtccggatcggtgaaaatgaatgcctctcccctgttcctgcattttgtcatcctccacggcacccccaacttcgacacaggtggagtgtgccggccctttctgaagctctaccaagccatgcagcctgtgtacacctccgggatctacaacgttggcccagaaaaccccagcaggatctgcatcgtcatcgagccggcccagcttctgaagggagatgtcatggtgaaatgctaccacaagaaataccgctcggccacccgtgacgtcattttccgcctgcagtttcacactggggctgtgcagggctacgggctggtgtttgggaaggaggatctggacaatgccagcaaagatgaccgttttcctgactatgggaaggttgaattagtcttctctgccacgcctgagaagattcaagggtccgaacacttgtacaacgaccacggtgtgattgtggactacaacacaacagacccactgatacgctgggactcgtacgagaacctcagtgcagatggagaagtgctacacacgcagggccctgtcgatggcagcctttacgcgaaggtgaggaagaaaagctcctcggatcctggcatcccaggtggcccccaggcaatcccggccaccaacagcccagaccacagtgaccacaccttgtctgtcagcagtgactccggccactctacagcctctgccaggacggataagacggaagagcgcctggccccaggaaccaggaggggcctgagtgcccaggagaaggcagagttggaccagctgctcagtggctttggcctggaagatcctggaagctccctcaaggaaatgactgatgctcgaagcaagtacagtgggacccgccacgtggtgccagcccaggttcacgtgaatggagacgctgctctgaaggatcgggagacagacattctggatgacgagatgccccaccacgacctgcacagtgtggacagccttgggaccctgtcctcctcggaagggcctcagtcggcccacctgggtcccttcacctgccacaagagcagccagaactcactcctatctgacggttttggcagcaacgttggtgaagatccgcagggcaccctcgttccggacctgggccttggcatggacggcccctatgagcgggagcggacttttgggagtcgagagcccaagcagccccagcccctgctgagaaagccctcagtgtccgcccagatgcaggcctatgggcagagcagctactccacacagacctgggtgcgccagcagcagatggttgtagctcaccagtatagcttcgccccagatggggaggcccggctggtgagccgctgccctgcagacaatcctggcctcgtccaggcccagcccagagtgccactcacccccacccgagggaccagcagtagggtggctgtccagaggggtgtaggcagtgggccacatccccctgacacacagcagccctctcccagcaaagcgttcaaacccaggtttccaggagaccaggttgtgaatggagccggcccagagctgagcacaggcccctccccaggctcgcccaccctggacatcgaccagtccatcgagcagctcaacaggctgatcctggagctggatcccaccttcgagcccatccctacccacatgaacgccctcggtagccaggccaatggctctgtgtctccagacagcgtgggaggtgggctccgggcaagcagcaggctgcctgacacaggagagggccccagcagggccaccgggcggcaaggctcctctgctgaacagcccctgggcgggagactcaggaagctgagcctggggcagtacgacaacgatgctggggggcagctgcccttctccaaatgtgcatggggaaaggctggtgtggactatgccccaaacctgccgccattcccctcaccagcggacgtcaaagagacgatgacccctggctatccccaggacctcgatattatcgatggcagaattttaagtagcaaggagtccatgtgttcaactccagcatttcctgtgtctccagagacaccgtatgtgaaaacagcgctgcgccatcctccgttcagcccacctgagcccccgctgagcagcccagccagtcagcacaaaggaggacgtgaaccacgaagctgccctgagacgctcactcacgctgtggggatgtcagagagccccatcggacccaaatccacgatgctccgggctgatgcgtcctcgacgccctcctttcagcaggcttttgcttcttcctgcaccatttccagcaacggccctgggcagaggagagagagctcctcttctgcagaacgccagtgggtggagagcagccccaagcccatggtttccctgctggggagcggccggcccaccggaagtcccctcagcgctgagttctccggtaccaggaaggactccccagtgctgtcctgcttcccgccgtcagagctccaggctcctttccacagccatgagctgtccctagcagagccaccggactccctggcgcctcccagcagccaggccttcctgggcttcggcaccgccccagtgggaagtggccttccgcccgaggaggacctgggggccttgctggccaattctcatggagcgtcaccgacccccagcatcccgctgacagcgacaggggctgccgacaatggcttcctgtcccacaactttctcacggtggcgcctggacacagcagccaccacagtccaggcctgcagggccagggtgtgaccctgcccgggcagccacccctccctgagaagaagcgggcctcggagggggatcgttctttgggctcagtctctccctcctccagtggcttctccagcccgcacagcgggagcaccatcagtatccccttcccaaatgtccttcccgacttttccaaggcttcagaagcggcctcacctctgccagatagtccaggtgataaacttgtgatcgtgaaatttgttcaagacacttccaagttctggtacaaggcggatatttcaagagaacaagccatcgccatgttgaaggacaaggagccgggctcattcattgttcgagacagccattccttccgaggggcctatggcctggccatgaaggtggccacgcccccaccttcagtcctgcagctgaacaagaaagctggagatttggccaatgaactcgtccggcactttttgatcgagtgtaccccgaagggagtgcggttgaaagggtgctcgaatgaaccatatttcgggagcctgacggccttggtgtgccagcattccatcacgcccttggccttgccgtgcaagctgcttatcccagagagagatccattggaggaaatagcagaaagttctccccagacggcagccaattcagcagctgagctgttgaagcagggggcagcctgcaatgtgtggtacttgaactctgtggagatggagtccctcaccggccaccaggcgatccagaaggccctgagcatcaccctggtccaggagcctccacctgtgtccacagttgtgcacttcaaggtgtcagcccagggcatcaccctgacagacaatcagaggaagctcttcttccggaggcattaccccgtgaacagtgtgattttctgtgccttggacccacaagacaggaagtggatcaaagatggcccttcctcaaaagtctttggatttgtggcccggaagcagggcagtgccacggataatgtgtgccacctgtttgcagagcatgaccctgagcagcctgccagtgccattgtcaacttcgtatcaaaggtcatgattggttccccaaagaaggtctgagaactcccctccctccctggacccaccgatgcctctcgaagccctggagacagccgttgggtgagggtggggcccccactttttaccaaactagtaaacctgacattccaggcccatgaggggaaagaggatcttccagctctgcaaaaacaagaacaaacaacatcaccgtgaattggcctttcctgaaagtgacttatctgacacatctctgtagccacatgctttttgggtagaagaagctgggcatgggtgcaccccaccccctagggtccccatgggaaagggacatgcaaggaaacagcacagaacacgaggtggtccccatgtccctggcacactagcattccgggggatgaggaatccccagcccttgaggcagaggtgccgagtgactgccatgcttcgcccgtccgcatgggcgcttctgtccagctgcacccgaggccgggggtttccctcacctcggtcttcccaagatggagatgctaacgaaactgagaagggggcgtatgtttgacgaaggtttgtgcaagtcaggcccttctggaacacagcagggcctacaacgaggggcctttgcgatgggctgtgaggatgggggtggtgggaagaattggccacgttggagaccccatgccaccccaccatggtgagtgctctgtgcctcctgctcacctgtggtgagctgggcgagctgggcgagctgggcgagctgggctggggagagcctgtgaggaccgagaggagaaatgagaagaaggaacaaaaatattatttctatgtaatttatattttacttatgccaaattatttatgataatttgccattgctatactgtaccagtgtcaaatgctgcagcctgccaagctgtgattttgtgaggcttgtccctatgtaggatgcaccgcaggcccctggccactgaaagagtgtgcagtggactgtgggtctcccatatgcggtgccgcccaaaggtggctttgcctcaagcaacctaccctgatgttttactcattggaatgtttttccccgattgtggatgacttcttttctgatggagagagtccaggagggatggaaaactcctggatttaagctcagcatcccccacatgggcttttcgatcatcttcaggcctgaagctgcacgacctgaagttcgcctgcatttatcagccctctttgtgctgctccttgccaccttggggttcctgctggggaccatgtgtggttgtggcatgtgtgagcagaagggaggatgaggaaaaagagaagaaaccccggtactgacaagctgtttttgagtgccactgtttgccatcatctaagccactgaatcaagtgtatttcaggcttatttcaacattccaatgccctggttttcctgcttgaatctgttcgtggtcaaaggtttgggggaatttgtgaccctggaacatccccagagtgaaagatggagctgggccacatcagaataaggccttggccccatcctctcacagcctaggtgctctgcaggcatgctgactgtcctgattgcgatccagcccgaaattccctcctctgctttcaaaagtcaaatcccccattcttaggccacactggtgtcacaagctcctgtcagggagctggggtttgggaatgtgctttgtgaactctgctttaaagtgaggggccgaggaaaacttagaaacaggcagagttggaagcagccaaatcacagtgggtgttgtgtgtgtgtgcgtgtgtgcatgcgtgcgtgtatgcgtgtgtgaaagcaggtggaccattccactttttagctcctattgatgcaccaaaccaagtgcctcatttctgtgccaaatgtttgccttggtcgttgtggacctccttctctaacttgcggtggcatgactgtcaggaggtgctggcattttcagcagatcctcatgtgttgaccctgatgtctttagcagaggcctctagcatctcggtttttcatccactgcaggaatgtggccacagggagcagaggtttgtactttccccaagaggtcctcatcctgagacggtctctacccatgtttaacccaaagagtgcaggccaggttccttatccttctgatgaaggatgagagagctcatttagaagtcagagcaaactagggtctcagtattgagaaacgcagcctgccagggaatcacagagacatcggggtgcccgcgatggccctcatgaagccatgcctcgacggcattcaggaagccctgcaaacgtgctttttgaactcattggccaggtgtgatttttacacaaggtaaacgtggtcaagggcatcggggaatttgctccaagcagatagctccctctgaggaaccaaaggaagcaagtttccacgatttctgaagagctggtataggaagtttctttcttccttttgtgttacatgtgcattaaacagaacaagctgtgtgtcatcacagattgtactgtgggctcagaaaccgtgagagagcccccaccgtggacaccggctctagggccacaggaaaaggaacgtttccaggcattttgtctccagggctcccgctggacaggcacgtactgccctggggagtaaatgcggagagttcacgaactgtgcccaacgcatgttatagccagggtcctactaactactcagtaaaagaacgtattgttgtattcctccagtgttaagctatagccatgttaaaagtcactgtgcatttattctcagcatcaaataccttgtaacgtcttctctgccttgttagtgcatatttttacttttctgatactgtaaagaatatatccagtatgtaaatgaatgttctataaatcttttgtatagtcattttctctgctccttaaatatcatctctattcagagtataataaaattatgaacttggtaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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