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Previous release (v1)
2024-04-28 04:17:52, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001406517 6502 bp mRNA linear PRI 12-DEC-2023
DEFINITION Homo sapiens ATPase copper transporting beta (ATP7B), transcript
variant 12, mRNA.
ACCESSION NM_001406517 XM_006719837
VERSION NM_001406517.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6502)
AUTHORS Ruturaj, Mishra M, Saha S, Maji S, Rodriguez-Boulan E, Schreiner R
and Gupta A.
TITLE Regulation of the apico-basolateral trafficking polarity of the
homologous copper-ATPases ATP7A and ATP7B
JOURNAL J Cell Sci 137 (5) (2024)
PUBMED 38032054
REMARK GeneRIF: Regulation of the apico-basolateral trafficking polarity
of the homologous copper-ATPases ATP7A and ATP7B.
REFERENCE 2 (bases 1 to 6502)
AUTHORS Gorukmez O, Ozgur T, Gorukmez O and Topak A.
TITLE ATP7B Gene Variant Profile Identified by NGS in Wilson's Disease
JOURNAL Fetal Pediatr Pathol 42 (6), 891-900 (2023)
PUBMED 37737146
REMARK GeneRIF: ATP7B Gene Variant Profile Identified by NGS in Wilson's
Disease.
REFERENCE 3 (bases 1 to 6502)
AUTHORS Chakraborty K, Das S, Pal A, Maji S, Rai B, Gupta A and
Bhattacharjee A.
TITLE Wilson disease-causing mutations in the carboxyl terminus of ATP7B
regulates its localization and Golgi exit selectively in the
unpolarized cells
JOURNAL Metallomics 15 (9) (2023)
PUBMED 37660282
REMARK GeneRIF: Wilson disease-causing mutations in the carboxyl terminus
of ATP7B regulates its localization and Golgi exit selectively in
the unpolarized cells.
REFERENCE 4 (bases 1 to 6502)
AUTHORS Xue Z, Chen H, Yu L and Jiang P.
TITLE A Systematic Review and Meta-Analysis of the R778L Mutation in
ATP7B With Wilson Disease in China
JOURNAL Pediatr Neurol 145, 135-147 (2023)
PUBMED 37354629
REMARK GeneRIF: A Systematic Review and Meta-Analysis of the R778L
Mutation in ATP7B With Wilson Disease in China.
REFERENCE 5 (bases 1 to 6502)
AUTHORS Petrukhin K, Lutsenko S, Chernov I, Ross BM, Kaplan JH and Gilliam
TC.
TITLE Characterization of the Wilson disease gene encoding a P-type
copper transporting ATPase: genomic organization, alternative
splicing, and structure/function predictions
JOURNAL Hum Mol Genet 3 (9), 1647-1656 (1994)
PUBMED 7833924
REFERENCE 6 (bases 1 to 6502)
AUTHORS Petrukhin K, Fischer SG, Pirastu M, Tanzi RE, Chernov I, Devoto M,
Brzustowicz LM, Cayanis E, Vitale E, Russo JJ et al.
TITLE Mapping, cloning and genetic characterization of the region
containing the Wilson disease gene
JOURNAL Nat Genet 5 (4), 338-343 (1993)
PUBMED 8298640
REFERENCE 7 (bases 1 to 6502)
AUTHORS Bull PC, Thomas GR, Rommens JM, Forbes JR and Cox DW.
TITLE The Wilson disease gene is a putative copper transporting P-type
ATPase similar to the Menkes gene
JOURNAL Nat Genet 5 (4), 327-337 (1993)
PUBMED 8298639
REMARK Erratum:[Nat Genet 1994 Feb;6(2):214]
REFERENCE 8 (bases 1 to 6502)
AUTHORS Yamaguchi Y, Heiny ME and Gitlin JD.
TITLE Isolation and characterization of a human liver cDNA as a candidate
gene for Wilson disease
JOURNAL Biochem Biophys Res Commun 197 (1), 271-277 (1993)
PUBMED 8250934
REFERENCE 9 (bases 1 to 6502)
AUTHORS Weiss,K.H. and Schilsky,M.
TITLE Wilson Disease
JOURNAL (in) Adam MP, Feldman J, Mirzaa GM, Pagon RA, Wallace SE, Bean LJH,
Gripp KW and Amemiya A (Eds.);
GENEREVIEWS(R);
(1993)
PUBMED 20301685
REFERENCE 10 (bases 1 to 6502)
AUTHORS Klein,C., Lohmann,K., Marras,C. and Munchau,A.
TITLE Hereditary Dystonia Overview
JOURNAL (in) Adam MP, Feldman J, Mirzaa GM, Pagon RA, Wallace SE, Bean LJH,
Gripp KW and Amemiya A (Eds.);
GENEREVIEWS(R);
(1993)
PUBMED 20301334
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from AL138821.12 and AL162377.10.
On May 17, 2022 this sequence version replaced XM_006719837.4.
Summary: This gene is a member of the P-type cation transport
ATPase family and encodes a protein with several membrane-spanning
domains, an ATPase consensus sequence, a hinge domain, a
phosphorylation site, and at least 2 putative copper-binding sites.
This protein is a monomer, and functions as a copper-transporting
ATPase which exports copper out of the cells, such as the efflux of
hepatic copper into the bile. Alternate transcriptional splice
variants, encoding different isoforms with distinct cellular
localizations, have been characterized. Mutations in this gene have
been associated with Wilson disease which is characterized by
copper accumulation. [provided by RefSeq, Dec 2019].
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR11853561.8292.1,
SRR14372080.352765.1 [ECO:0000332]
RNAseq introns :: mixed sample support SAMEA1965299,
SAMEA1966682 [ECO:0006172]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-68 AL138821.12 41469-41536 c
69-1302 AL138821.12 33967-35200 c
1303-1560 AL138821.12 30524-30781 c
1561-1724 AL138821.12 28476-28639 c
1725-1886 AL138821.12 24904-25065 c
1887-1963 AL138821.12 21869-21945 c
1964-2138 AL138821.12 20180-20354 c
2139-2372 AL138821.12 18343-18576 c
2373-2464 AL138821.12 17548-17639 c
2465-2592 AL138821.12 10304-10431 c
2593-2747 AL138821.12 10039-10193 c
2748-2882 AL138821.12 9694-9828 c
2883-3077 AL138821.12 6316-6510 c
3078-3260 AL138821.12 4141-4323 c
3261-3429 AL138821.12 2418-2586 c
3430-3573 AL138821.12 1113-1256 c
3574-3716 AL162377.10 168087-168229 c
3717-3920 AL162377.10 166512-166715 c
3921-4038 AL162377.10 166312-166429 c
4039-4141 AL162377.10 164629-164731 c
4142-6502 AL162377.10 161705-164065 c
FEATURES Location/Qualifiers
source 1..6502
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="13"
/map="13q14.3"
gene 1..6502
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="ATPase copper transporting beta"
/db_xref="GeneID:540"
/db_xref="HGNC:HGNC:870"
/db_xref="MIM:606882"
exon 1..68
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
misc_feature 42..44
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="upstream in-frame stop codon"
exon 69..1302
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
CDS 114..4415
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/EC_number="7.2.2.8"
/note="isoform i is encoded by transcript variant 12;
copper-transporting ATPase 2; copper pump 2; ATPase, Cu++
transporting, beta polypeptide; Wilson disease-associated
protein; ATPase, Cu(2+)- transporting, beta polypeptide;
copper-transporting protein ATP7B"
/codon_start=1
/product="copper-transporting ATPase 2 isoform i"
/protein_id="NP_001393446.1"
/db_xref="GeneID:540"
/db_xref="HGNC:HGNC:870"
/db_xref="MIM:606882"
/translation="
MKKSFAFDNVGYEGGLDGLGPSSQVATSTVRILGMTCQSCVKSIEDRISNLKGIISMKVSLEQGSATVKYVPSVVCLQQVCHQIGDMGFEASIAEGKAASWPSRSLPAQEAVVKLRVEGMTCQSCVSSIEGKVRKLQGVVRVKVSLSNQEAVITYQPYLIQPEDLRDHVNDMGFEAAIKSKVAPLSLGPIDIERLQSTNPKRPLSSANQNFNNSETLGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPSVISPEELRAAIEDMGFEASVVSESCSTNPLGNHSAGNSMVQTTDGTPTSVQEVAPHTGRLPANHAPDILAKSPQSTRAVAPQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLAQRNPNAHHLDHKMEIKQWKKSFLCSLVFGIPVMALMIYMLIPSNEPHQSMVLDHNIIPGLSILNLIFFILCTFVQLLGGWYFYVQAYKSLRHRSANMDVLIVLATSIAYVYSLVILVVAVAEKAERSPVTFFDTPPMLFVFIALGRWLEHLAKSKTSEALAKLMSLQATEATVVTLGEDNLIIREEQVPMELVQRGDIVKVVPGGKFPVDGKVLEGNTMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLIKATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIIIMSTLTLVVWIVIGFIDFGVVQRYFPNPNKHISQTEVIIRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITHGVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTETLGYCTDFQAVPGCGIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMKGQTAILVAIDGVLCGMIAIADAVKQEAALAVHTLQSMGVDVVLITGDNRKTARAIATQVGINKVFAEVLPSHKVAKVQELQNKGKKVAMVGDGVNDSPALAQADMGVAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLVLALIYNLVGIPIAAGVFMPIGIVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDLERYEAQAHGHMKPLTASQVSVHIGMDDRWRDSPRATPWDQVSYVSQVSLSSLTSDKPSRHSAAADDDGDKWSLLLNGRDEEQYI"
misc_feature 198..389
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:238219"
misc_feature order(216..224,231..233)
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="metal-binding site [ion binding]"
/db_xref="CDD:238219"
misc_feature 453..644
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:238219"
misc_feature order(471..479,486..488)
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="metal-binding site [ion binding]"
/db_xref="CDD:238219"
misc_feature 795..971
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:238219"
misc_feature order(813..821,828..830)
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="metal-binding site [ion binding]"
/db_xref="CDD:238219"
misc_feature 1104..1292
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:238219"
misc_feature order(1119..1127,1134..1136)
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="metal-binding site [ion binding]"
/db_xref="CDD:238219"
misc_feature 1491..1679
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:238219"
misc_feature order(1506..1514,1521..1523)
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="metal-binding site [ion binding]"
/db_xref="CDD:238219"
misc_feature 1716..1907
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:238219"
misc_feature order(1734..1742,1749..1751)
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="metal-binding site [ion binding]"
/db_xref="CDD:238219"
misc_feature 1971..4079
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="P-type heavy metal-transporting ATPase, similar to
human copper-transporting ATPases, ATP7A and ATP7B;
Region: P-type_ATPase_Cu-like; cd02094"
/db_xref="CDD:319783"
misc_feature order(2964..2966,2970..2972,4008..4010)
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="putative Cu binding site [ion binding]; other site"
/db_xref="CDD:319783"
misc_feature order(3096..3104,3306..3308,3459..3467,3555..3557,
3675..3683,3741..3743,3750..3752,3759..3761,3816..3818,
3825..3827)
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:319783"
exon 1303..1560
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 1561..1724
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 1725..1886
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 1887..1963
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 1964..2138
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 2139..2372
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 2373..2464
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 2465..2592
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 2593..2747
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 2748..2882
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 2883..3077
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 3078..3260
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 3261..3429
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 3430..3573
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 3574..3716
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 3717..3920
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 3921..4038
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 4039..4141
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
exon 4142..6502
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/inference="alignment:Splign:2.1.0"
regulatory 6475..6480
/regulatory_class="polyA_signal_sequence"
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="hexamer: AATAAA"
polyA_site 6502
/gene="ATP7B"
/gene_synonym="PWD; WC1; WD; WND"
/note="major polyA site"
ORIGIN
agatattcaggatgtacgtggtccagagctgttgtcttctctgacttgtgtcttgtgtgccttctcctatcttatctaagctttctttgcctacccgtgcctgggaaccagcaatgaagaagagttttgcttttgacaatgttggctatgaaggtggtctggatggcctgggcccttcttctcaggtggccaccagcacagtcaggatcttgggcatgacttgccagtcatgtgtgaagtccattgaggacaggatttccaatttgaaaggcatcatcagcatgaaggtttccctggaacaaggcagtgccactgtgaaatatgtgccatcggttgtgtgcctgcaacaggtttgccatcaaattggggacatgggcttcgaggccagcattgcagaaggaaaggcagcctcctggccctcaaggtccttgcctgcccaggaggctgtggtcaagctccgggtggagggcatgacctgccagtcctgtgtcagctccattgaaggcaaggtccggaaactgcaaggagtagtgagagtcaaagtctcactcagcaaccaagaggccgtcatcacttatcagccttatctcattcagcccgaagacctcagggaccatgtaaatgacatgggatttgaagctgccatcaagagcaaagtggctcccttaagcctgggaccaattgatattgagcggttacaaagcactaacccaaagagacctttatcttctgctaaccagaattttaataattctgagaccttggggcaccaaggaagccatgtggtcaccctccaactgagaatagatggaatgcattgtaagtcttgcgtcttgaatattgaagaaaatattggccagctcctaggggttcaaagtattcaagtgtccttggagaacaaaactgcccaagtaaagtatgacccttcttgtaccagcccagtggctctgcagagggctatcgaggcacttccacctgggaattttaaagtttctcttcctgatggagccgaagggagtgggacagatcacaggtcttccagttctcattcccctggctccccaccgagaaaccaggtccagggcacatgcagtaccactctgattgccattgccggcatgacctgtgcatcctgtgtccattccattgaaggcatgatctcccaactggaaggggtgcagcaaatatcggtgtctttggccgaagggactgcaacagttctttataatccctctgtaattagcccagaagaactcagagctgctatagaagacatgggatttgaggcttcagtcgtttctgaaagctgttctactaaccctcttggaaaccacagtgctgggaattccatggtgcaaactacagatggtacacctacatctgtgcaggaagtggctccccacactgggaggctccctgcaaaccatgccccggacatcttggcaaagtccccacaatcaaccagagcagtggcaccgcagaagtgcttcttacagatcaaaggcatgacctgtgcatcctgtgtgtctaacatagaaaggaatctgcagaaagaagctggtgttctctccgtgttggttgccttgatggcaggaaaggcagagatcaagtatgacccagaggtcatccagcccctcgagatagctcagttcatccaggacctgggttttgaggcagcagtcatggaggactacgcaggctccgatggcaacattgagctgacaatcacagggatgacctgcgcgtcctgtgtccacaacatagagtccaaactcacgaggacaaatggcatcacttatgcctccgttgcccttgccaccagcaaagcccttgttaagtttgacccggaaattatcggtccacgggatattatcaaaattattgaggaaattggctttcatgcttccctggcccagagaaaccccaacgctcatcacttggaccacaagatggaaataaagcagtggaagaagtctttcctgtgcagcctggtgtttggcatccctgtcatggccttaatgatctatatgctgatacccagcaacgagccccaccagtccatggtcctggaccacaacatcattccaggactgtccattctaaatctcatcttctttatcttgtgtacctttgtccagctcctcggtgggtggtacttctacgttcaggcctacaaatctctgagacacaggtcagccaacatggacgtgctcatcgtcctggccacaagcattgcttatgtttattctctggtcatcctggtggttgctgtggctgagaaggcggagaggagccctgtgacattcttcgacacgccccccatgctctttgtgttcattgccctgggccggtggctggaacacttggcaaagagcaaaacctcagaagccctggctaaactcatgtctctccaagccacagaagccaccgttgtgacccttggtgaggacaatttaatcatcagggaggagcaagtccccatggagctggtgcagcggggcgatatcgtcaaggtggtccctgggggaaagtttccagtggatgggaaagtcctggaaggcaataccatggctgatgagtccctcatcacaggagaagccatgccagtcactaagaaacccggaagcactgtaattgcggggtctataaatgcacatggctctgtgctcattaaagctacccacgtgggcaatgacaccactttggctcagattgtgaaactggtggaagaggctcagatgtcaaaggcacccattcagcagctggctgaccggtttagtggatattttgtcccatttatcatcatcatgtcaactttgacgttggtggtatggattgtaatcggttttatcgattttggtgttgttcagagatactttcctaaccccaacaagcacatctcccagacagaggtgatcatccggtttgctttccagacgtccatcacggtgctgtgcattgcctgcccctgctccctggggctggccacgcccacggctgtcatggtgggcaccggggtggccgcgcagaacggcatcctcatcaagggaggcaagcccctggagatggcgcacaagataaagactgtgatgtttgacaagactggcaccattacccatggcgtccccagggtcatgcgggtgctcctgctgggggatgtggccacactgcccctcaggaaggttctggctgtggtggggactgcggaggccagcagtgaacaccccttgggcgtggcagtcaccaaatactgtaaagaggaacttggaacagagaccttgggatactgcacggacttccaggcagtgccaggctgtggaattgggtgcaaagtcagcaacgtggaaggcatcctggcccacagtgagcgccctttgagtgcaccggccagtcacctgaatgaggctggcagccttcccgcagaaaaagatgcagtcccccagaccttctctgtgctgattggaaaccgtgagtggctgaggcgcaacggtttaaccatttctagcgatgtcagtgacgctatgacagaccacgagatgaaaggacagacagccatcctggtggctattgacggtgtgctctgtgggatgatcgcaatcgcagacgctgtcaagcaggaggctgccctggctgtgcacacgctgcagagcatgggtgtggacgtggttctgatcacgggggacaaccggaagacagccagagctattgccacccaggttggcatcaacaaagtctttgcagaggtgctgccttcgcacaaggtggccaaggtccaggagctccagaataaagggaagaaagtcgccatggtgggggatggggtcaatgactccccggccttggcccaggcagacatgggtgtggccattggcaccggcacggatgtggccatcgaggcagccgacgtcgtccttatcagaaatgatttgctggatgtggtggctagcattcacctttccaagaggactgtccgaaggatacgcatcaacctggtcctggcactgatttataacctggttgggatacccattgcagcaggtgtcttcatgcccatcggcattgtgctgcagccctggatgggctcagcggccatggcagcctcctctgtgtctgtggtgctctcatccctgcagctcaagtgctataagaagcctgacctggagaggtatgaggcacaggcgcatggccacatgaagcccctgacggcatcccaggtcagtgtgcacataggcatggatgacaggtggcgggactcccccagggccacaccatgggaccaggtcagctatgtcagccaggtgtcgctgtcctccctgacgtccgacaagccatctcggcacagcgctgcagcagacgatgatggggacaagtggtctctgctcctgaatggcagggatgaggagcagtacatctgatgacttcaggcaggcgggccggggcagggacttgcctccactcaccacaagctgagcaggacagccagcagcaggatgggctgagctagcctccagctttggggacttccgctccctggatatgtccagtcatcctgccctgcagcacgcggccttgtctgggtgcagctgggcttggcctggagaggacggccctgcctgcctcttggcctcacgggaccgtcagcatgggctttgtcttggactctagtccttggctggactgtagaaggtgagaggcgagtcaccctcctcacagacctctgcttggagtatttaggatgactgctgtgaaatggagaacagtttcatcaggaccaaaaaacctcactgggcctttccagagaactgcagacctcactgtcagggtctttctgatgacgcctgtctgtgtgcatcatgtttctgagaccacagtttacctcaggtgtgcctgttgctttcttcctgcatagtctgttcctttcttcgtacatagtctgttccttttctctcctgtgtgcttgtcagtggggacccctcgcaaccctgcctgtcacctgggagggtgggaccaatgtccttgtggtctttgctgctgctctcaggcgcttctccaatgctctggagtgtgcatttcagcttgaacctgcttcctggctcacacatccccagccagggagcttgccacactcttcttcaagttgaggagagttcttttttgcttaaagcccccttctccatggagtgttggcttctcaatagagtgttgttgctgaccagctggagtgagggcctcagagcctgacctgagagtccgtactcggcttcctgtggggtgtaggttctcgcgattcaggacgtccttccatatccctgcccagcctgtggtgcttgaaacgtttgccccatgggaaacgtatgtgtgcaggagcctccctgcacggcccaaggggcttcgttttcagtcttctgactgtcacctcgtggggttcagtagagaattcatgtgactagcgcctggccttgtgtggcttggaggaaatggtactgcccaaataggaggaaaacacagcctccctgagcctgcattctgcacgctgcccaggggcttcagaaaaggagtggccacagcaccccgaagggagcatctgtttacctggcagtggctctcagagcagcagaacgggttcagttttagactctgaagttggttgtgattgacagaaccctttgggagcaaactagtagagttggattaaattctgggtgaaacccttttctcccacacaaaatagttttagtgatttttttcattgtccattacttgccaggggcagttttagcagcacttttgatagattacgtctaatcctcccaaccaaccagcagggtagctattactgtccacattttacaggcaaggaaacaggctccaagaggctgaggactttgcccaggatgacatagccaatggacaagcagtgtctgtcagctgtgaaggcttcactcttattgtccttctaccttgaatagaagttttcctgataagaataaacgaggaaaaggtccttgcctcctggaagaacaaatctaccaggtgatctattcattgtttcaactcagaatgcacttgattcaggaggtcatctgaccttcaccttggatggttagtttcactttttacatatagtttttgcagggttttattttataaaatccaagcgcgctgttgattgtgttttccttgttttcagcccccccactccagcccgcagcacatttccgctgtccgtcagtaattgtgtcctctctttatgcttgcttggggaatgttgttttctgactaggctgatcattatctaaagaatctaattctgttgatttttaaaacttttaggaccataaacgttgtgttcatatatggacatggaaatatttatataattttatagaaaataaccttttagatggtcaaagtgtaaggagtttttttgtcagataatcatttctacttcaaaaacatttcatgcaatattagaataaagttcctgtcattcctctaaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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