2024-04-30 14:44:24, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001376861 556 bp mRNA linear PRI 28-DEC-2022 DEFINITION Homo sapiens ATPase H+ transporting V1 subunit G3 (ATP6V1G3), transcript variant 4, mRNA. ACCESSION NM_001376861 XM_006711163 VERSION NM_001376861.1 KEYWORDS RefSeq; MANE Select. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 556) AUTHORS Chen Y and Hu J. TITLE ATP6V1G3 Acts as a Key Gene in Recurrent Spontaneous Abortion: An Integrated Bioinformatics Analysis JOURNAL Med Sci Monit 26, e927537 (2020) PUBMED 33028803 REMARK GeneRIF: ATP6V1G3 Acts as a Key Gene in Recurrent Spontaneous Abortion: An Integrated Bioinformatics Analysis. Publication Status: Online-Only REFERENCE 2 (bases 1 to 556) AUTHORS Low SK, Chung S, Takahashi A, Zembutsu H, Mushiroda T, Kubo M and Nakamura Y. TITLE Genome-wide association study of chemotherapeutic agent-induced severe neutropenia/leucopenia for patients in Biobank Japan JOURNAL Cancer Sci 104 (8), 1074-1082 (2013) PUBMED 23648065 REFERENCE 3 (bases 1 to 556) AUTHORS Kamatani Y, Matsuda K, Okada Y, Kubo M, Hosono N, Daigo Y, Nakamura Y and Kamatani N. TITLE Genome-wide association study of hematological and biochemical traits in a Japanese population JOURNAL Nat Genet 42 (3), 210-215 (2010) PUBMED 20139978 REFERENCE 4 (bases 1 to 556) AUTHORS Hinton A, Sennoune SR, Bond S, Fang M, Reuveni M, Sahagian GG, Jay D, Martinez-Zaguilan R and Forgac M. TITLE Function of a subunit isoforms of the V-ATPase in pH homeostasis and in vitro invasion of MDA-MB231 human breast cancer cells JOURNAL J Biol Chem 284 (24), 16400-16408 (2009) PUBMED 19366680 REMARK GeneRIF: V-ATPases affecting the pH of the cytosol and intracellular compartments, particularly those containing a3, are also involved in invasion in breast cancer REFERENCE 5 (bases 1 to 556) AUTHORS Adachi K, Oiwa K, Nishizaka T, Furuike S, Noji H, Itoh H, Yoshida M and Kinosita K Jr. TITLE Coupling of rotation and catalysis in F(1)-ATPase revealed by single-molecule imaging and manipulation JOURNAL Cell 130 (2), 309-321 (2007) PUBMED 17662945 REFERENCE 6 (bases 1 to 556) AUTHORS Nelson N and Harvey WR. TITLE Vacuolar and plasma membrane proton-adenosinetriphosphatases JOURNAL Physiol Rev 79 (2), 361-385 (1999) PUBMED 10221984 REMARK Review article REFERENCE 7 (bases 1 to 556) AUTHORS Finbow ME and Harrison MA. TITLE The vacuolar H+-ATPase: a universal proton pump of eukaryotes JOURNAL Biochem J 324 (Pt 3) (Pt 3), 697-712 (1997) PUBMED 9210392 REMARK Review article REFERENCE 8 (bases 1 to 556) AUTHORS Stevens TH and Forgac M. TITLE Structure, function and regulation of the vacuolar (H+)-ATPase JOURNAL Annu Rev Cell Dev Biol 13, 779-808 (1997) PUBMED 9442887 REMARK Review article REFERENCE 9 (bases 1 to 556) AUTHORS Brown D, Lui B, Gluck S and Sabolic I. TITLE A plasma membrane proton ATPase in specialized cells of rat epididymis JOURNAL Am J Physiol 263 (4 Pt 1), C913-C916 (1992) PUBMED 1415677 REFERENCE 10 (bases 1 to 556) AUTHORS Dautry-Varsat,A. TITLE Receptor-mediated endocytosis: the intracellular journey of transferrin and its receptor JOURNAL Biochimie 68 (3), 375-381 (1986) PUBMED 2874839 REMARK Review article COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AI791754.1, BC101130.1 and BF509031.1. On Nov 20, 2019 this sequence version replaced XM_006711163.3. Summary: This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c'' and d. Additional isoforms of many of the V1 and V0 subunit proteins are encoded by multiple genes or alternatively spliced transcript variants. This gene encodes one of three G subunit proteins. Transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BX114684.1, CB046058.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1970526, SAMEA2145774 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000367382.6/ ENSP00000356352.2 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-4 AI791754.1 15-18 5-437 BC101130.1 1-433 438-556 BF509031.1 14-132 c FEATURES Location/Qualifiers source 1..556 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="1" /map="1q31.3" gene 1..556 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /note="ATPase H+ transporting V1 subunit G3" /db_xref="GeneID:127124" /db_xref="HGNC:HGNC:18265" /db_xref="MIM:618071" exon 1..112 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /inference="alignment:Splign:2.1.0" variation 6 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:1306527170" variation 9 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:762421187" variation 13 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:1313145902" variation 14 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1660312368" variation 16 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:1245578690" variation 22 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:1355518046" variation 24 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:774988256" variation 27 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:763581571" variation 29 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1389547265" CDS 31..387 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /EC_number="7.1.2.2" /note="isoform a is encoded by transcript variant 4; ATPase, H+ transporting, lysosomal (vacuolar proton pump) subunit G3; vacuolar proton pump, subunit G3; V-ATPase G3 subunit; vacuolar ATP synthase subunit G 3; V-ATPase G subunit 3; vacuolar proton pump G subunit 3; V-ATPase 13 kDa subunit 3; V-type proton ATPase subunit G 3; V-ATPase subunit G 3; vacuolar proton pump subunit G 3; ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3" /codon_start=1 /product="V-type proton ATPase subunit G 3 isoform a" /protein_id="NP_001363790.1" /db_xref="CCDS:CCDS1395.1" /db_xref="GeneID:127124" /db_xref="HGNC:HGNC:18265" /db_xref="MIM:618071" /translation="
MTSQSQGIHQLLQAEKRAKDKLEEAKKRKGKRLKQAKEEAMVEIDQYRMQRDKEFRLKQSKIMGSQNNLSDEIEEQTLGKIQELNGHYNKYMESVMNQLLSMVCDMKPEIHVNYRATN"
misc_feature 31..132 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /note="propagated from UniProtKB/Swiss-Prot (Q96LB4.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 37..351 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /note="Vacuolar (H+)-ATPase G subunit; Region: V-ATPase_G; pfam03179" /db_xref="CDD:427183" variation 32 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:762497386" variation 33 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:775057499" variation 35 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:769509249" variation 39 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:184813174" variation 42 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:371673303" variation 46 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:867256545" variation 47 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:747013252" variation 48 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1660309784" variation 49 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:1379432056" variation 51 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:777656108" variation 52 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:755062618" variation 56..65 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="" /replace="accagcttct" /db_xref="dbSNP:1660308093" variation 58 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1334703053" variation 60 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:774570397" variation 64 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:930668124" variation 68 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:779954548" variation 69 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="g" /replace="t" /db_xref="dbSNP:756361136" variation 70 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1660307687" variation 74 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:1660307555" variation 79 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:145635563" variation 80 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:77891982" variation 84 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:757695000" variation 94 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:1357341284" variation 96 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1474694353" variation 97 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:1660306435" variation 99 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:752155821" variation 104 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1660306148" variation 105 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:2103149074" variation 108 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1236657850" variation 110 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:1660305816" variation 112 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:974436768" exon 113..213 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /inference="alignment:Splign:2.1.0" variation 113 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1342309127" variation 117 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:1299331279" variation 119 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1243392718" variation 123 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:753377928" variation 124 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:765804703" variation 125 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:74134730" variation 127 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:750027154" variation 132 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1326889691" variation 140 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:1409418665" variation 141 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1371294574" variation 144 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1170701098" variation 148 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1055306745" variation 151 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1443078628" variation 153 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:767409849" variation 155 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="g" /replace="t" /db_xref="dbSNP:761484574" variation 161 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:150515999" variation 165 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:764153833" variation 166 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:1659784983" variation 167 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:762948526" variation 168 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1483090462" variation 169 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:977732012" variation 176 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:1659783628" variation 182 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:948239862" variation 184..198 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="ga" /replace="gataaagagtttcga" /db_xref="dbSNP:1381846888" variation 186 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1219714753" variation 187..189 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="aaa" /db_xref="dbSNP:772670148" variation 189 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1333521167" variation 190 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:16843254" variation 192 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="g" /replace="t" /db_xref="dbSNP:1358303424" variation 196 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:776856347" variation 197 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1229280482" variation 200 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:771076797" variation 201 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:747315950" variation 202 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:773304511" variation 203 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1659781218" variation 204 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1659781095" variation 205 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1309937250" variation 207 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:772534862" variation 208 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:376149640" variation 209 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1659780470" variation 211 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:755475418" exon 214..556 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /inference="alignment:Splign:2.1.0" variation 214 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:879766724" variation 221 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="g" /replace="t" /db_xref="dbSNP:1484689236" variation 222 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:184819872" variation 224 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:780505562" variation 237 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1659533569" variation 240..242 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="aga" /db_xref="dbSNP:1659533374" variation 243 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1194350517" variation 244 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:2103128317" variation 248 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1346683015" variation 251 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1465666337" variation 252 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:755700313" variation 254..261 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="aaca" /replace="aacaaaca" /db_xref="dbSNP:1271872032" variation 255..257 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="aca" /db_xref="dbSNP:1659532017" variation 256 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:745394093" variation 259 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:112576263" variation 260 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1302079609" variation 262 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1266446644" variation 265..267 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="gg" /replace="ggg" /db_xref="dbSNP:1319597756" variation 266 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:756864302" variation 267 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:777772213" variation 271 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:112568629" variation 272 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1390621616" variation 273 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:377749734" variation 280 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:1334591265" variation 283 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1558174172" variation 285 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:765286199" variation 287 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:759475189" variation 292 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:750469568" variation 296 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:767571258" variation 298 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:1659528452" variation 299 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:761997831" variation 300 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:774551191" variation 301 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1188865479" variation 303 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1450468256" variation 311 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1220595588" variation 312 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1250368573" variation 317 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1202259334" variation 319..320 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="aa" /replace="aaa" /db_xref="dbSNP:1558174109" variation 321 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:769046951" variation 322 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1659526260" variation 324..326 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="" /replace="gct" /db_xref="dbSNP:1256614981" variation 324 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="g" /replace="t" /db_xref="dbSNP:143795532" variation 325 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:763283835" variation 330..337 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="" /replace="gagcatgg" /db_xref="dbSNP:1367084288" variation 331 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:775784481" variation 332 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:770235507" variation 333 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:1571710627" variation 335 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:746320113" variation 337 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:373414043" variation 343 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:944996834" variation 346 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:138693600" variation 347 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1659522834" variation 348 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1395322838" variation 351 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:1402845242" variation 352 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:2103128096" variation 361 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1304557759" variation 362 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1659522109" variation 363 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1460009188" variation 370 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1369465257" variation 374 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1306277172" variation 376 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:903166782" variation 377 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:538283202" variation 383 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1431260001" variation 384 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:542842352" variation 389 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:758073073" variation 392 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:752568625" variation 394 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:778698840" variation 395 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1184161003" variation 396..399 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="ca" /replace="caca" /db_xref="dbSNP:780883411" variation 398 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:946766280" variation 400 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /db_xref="dbSNP:1558173955" variation 401..402 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="" /replace="aaaa" /db_xref="dbSNP:1274097003" variation 402..405 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="" /replace="tttc" /db_xref="dbSNP:1344593910" variation 405 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:1206050747" variation 408 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:572126012" variation 409..417 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="aaaaaaa" /replace="aaaaaaaa" /replace="aaaaaaaaa" /replace="aaaaaaaaaa" /db_xref="dbSNP:746211686" variation 409 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1659519622" variation 411 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1659519530" variation 412 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:1659519435" variation 413..420 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="aaaaaggt" /replace="aaaaaggtaaaaaggt" /db_xref="dbSNP:1659518436" variation 413 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:1243829892" variation 414 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:1659519226" variation 415 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:753801103" variation 417 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:915362328" variation 418 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:914765045" variation 419 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:767559300" variation 420 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1314758853" variation 421 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1433510401" variation 425 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1389673291" variation 428 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:761849245" variation 429 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:751825875" variation 432 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:1209455039" variation 435 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="g" /replace="t" /db_xref="dbSNP:764325098" variation 436 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:763123368" variation 437 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:374367261" variation 438..451 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="ttgcttatggcttc" /replace="ttgcttatggcttcttgcttatggcttc" /db_xref="dbSNP:1659516301" variation 438 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:373064078" variation 441 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="" /replace="c" /db_xref="dbSNP:1659516917" variation 441 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1659516757" variation 445 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1659516620" variation 447 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:2103127940" variation 450 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1659516477" variation 451 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1393749416" variation 452 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:192406637" variation 454 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1055160" variation 457 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1221460042" variation 461 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1558173848" variation 464 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1659515077" variation 478 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1466382950" variation 479 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:923034432" variation 483 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1659514605" variation 484 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:1316753252" variation 485 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:971365911" variation 490 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:1483264731" variation 492 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:1659514064" variation 496 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1659513959" variation 497 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1220019221" variation 498 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:375682093" variation 508 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:2103127891" variation 513 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:991319181" variation 514 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1659513477" variation 518 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1230954677" variation 524 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:951792764" variation 525 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:555692844" variation 527 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:993213516" variation 528 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:534514081" variation 529 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1259486474" variation 530 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="c" /replace="t" /db_xref="dbSNP:1659512632" variation 531 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:537568795" variation 532 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:762617870" variation 535 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:1659512282" variation 539..545 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="aaa" /replace="aaacaaa" /db_xref="dbSNP:1274894417" variation 539 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:187639981" regulatory 540..545 /regulatory_class="polyA_signal_sequence" /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /note="hexamer: AACAAA" variation 541 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="c" /db_xref="dbSNP:1659512085" variation 546 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="g" /db_xref="dbSNP:1417442261" variation 555 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /replace="a" /replace="t" /db_xref="dbSNP:555025821" polyA_site 556 /gene="ATP6V1G3" /gene_synonym="ATP6G3; Vma10" /note="major polyA site" ORIGIN
acagaagccacttgcttggagcagactaccatgacaagccagtctcaggggatccaccagcttcttcaggcagaaaaacgggccaaggacaagctagaggaagccaagaagagaaaaggaaagcgattgaagcaagccaaggaggaagcaatggtagaaattgaccagtacagaatgcagagagataaagagtttcgactaaaacaatctaagataatgggctctcagaataatctctcagatgaaatagaagaacaaacactagggaagatacaagaacttaatggacactacaataagtatatggaaagtgtgatgaaccagctcttgagcatggtctgtgacatgaaaccagaaatccatgtgaactacagagccaccaactaaatgtacatcacagttttcaagaaaaaaaaaggtgtgtgagtgccacctggttgcttatggcttcgtatttttatgttgagaaatttgaaatgagaaccttaaatttacatttacaggaaatgtgacataactcatacatcggcactgaattaaacaaaacaaaatacaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]