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Previous release (v1)
2024-04-30 09:14:30, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001354357 682 bp mRNA linear PRI 30-DEC-2022
DEFINITION Homo sapiens chromosome 6 open reading frame 52 (C6orf52),
transcript variant 2, mRNA.
ACCESSION NM_001354357 NR_026736
VERSION NM_001354357.2
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 682)
AUTHORS Gaudet P, Livstone MS, Lewis SE and Thomas PD.
TITLE Phylogenetic-based propagation of functional annotations within the
Gene Ontology consortium
JOURNAL Brief Bioinform 12 (5), 449-462 (2011)
PUBMED 21873635
REFERENCE 2 (bases 1 to 682)
AUTHORS Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
PUBMED 12477932
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
BX280692.1 and AI621292.1.
On Aug 13, 2020 this sequence version replaced NM_001354357.1.
Sequence Note: This RefSeq record was created from transcript and
genomic sequence data to make the sequence consistent with the
reference genome assembly. The genomic coordinates used for the
transcript record were based on transcript alignments.
##Evidence-Data-START##
CDS exon combination :: BE670432.1, AI621292.1 [ECO:0000331]
RNAseq introns :: partial sample support SAMEA1968968,
SAMEA2144835 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-210 BX280692.1 1-210
211-682 AI621292.1 12-483 c
FEATURES Location/Qualifiers
source 1..682
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="6"
/map="6p24.2"
gene 1..682
/gene="C6orf52"
/note="chromosome 6 open reading frame 52"
/db_xref="GeneID:347744"
/db_xref="HGNC:HGNC:20881"
exon 1..95
/gene="C6orf52"
/inference="alignment:Splign:2.1.0"
variation 1
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1769727134"
variation 7
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1769726894"
variation 12
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1769726623"
variation 14
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1769726351"
variation 20
/gene="C6orf52"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:957350793"
variation 28
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1769725780"
variation 31
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1561887916"
variation 34
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1343041893"
variation 35
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1769724970"
variation 42
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1031663490"
variation 43
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:1769724340"
variation 44
/gene="C6orf52"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:754722043"
variation 48
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1769723821"
variation 49
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:999318955"
variation 52
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1769723212"
variation 56
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:901359297"
variation 57
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1249661050"
variation 58
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1561887881"
variation 60..66
/gene="C6orf52"
/replace="aaaaaa"
/replace="aaaaaaa"
/replace="aaaaaaaa"
/db_xref="dbSNP:940296505"
variation 66
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1041157420"
variation 68
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:538446324"
variation 70
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:1769721333"
variation 71
/gene="C6orf52"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:907305114"
variation 72
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1769720900"
variation 74
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:753608052"
variation 78
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1382468701"
variation 84
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:764457018"
variation 89
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1273677159"
variation 91
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1471134444"
exon 96..294
/gene="C6orf52"
/inference="alignment:Splign:2.1.0"
variation 98
/gene="C6orf52"
/replace="t"
/replace="tt"
/db_xref="dbSNP:747603354"
variation 99
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1561879117"
variation 102
/gene="C6orf52"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1011125634"
variation 104
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768927991"
variation 106
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1440439297"
variation 113
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:200505624"
variation 116
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:770590197"
variation 120
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768927086"
variation 123
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768926904"
variation 129
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1768926702"
variation 130
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1223471623"
variation 131
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1318612944"
variation 132
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:954285066"
variation 133..135
/gene="C6orf52"
/replace="cc"
/replace="ccc"
/db_xref="dbSNP:1768925916"
variation 135
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1581558171"
variation 136
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1768925520"
variation 139
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768925333"
variation 140..143
/gene="C6orf52"
/replace="ag"
/replace="agag"
/db_xref="dbSNP:1768924686"
variation 140
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1028438361"
variation 141
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1380658741"
variation 148
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:369487510"
variation 149
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:148683195"
variation 151
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1449898024"
variation 152
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1403679080"
variation 153
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1175542177"
variation 154
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1466088907"
variation 158
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1425762257"
variation 161
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:772896648"
variation 162
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1007592787"
variation 163
/gene="C6orf52"
/replace=""
/replace="t"
/db_xref="dbSNP:1768922612"
variation 164
/gene="C6orf52"
/replace="a"
/replace="aa"
/db_xref="dbSNP:1183258946"
variation 164
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1256393369"
variation 165
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:562369512"
variation 167
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:867864371"
variation 168
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:144052767"
variation 169
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1203520783"
variation 170
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:573638215"
variation 173
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1253663671"
variation 175
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1225310456"
variation 176
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1307019042"
variation 177
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:746914088"
variation 178
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1248454896"
variation 180
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1051852766"
variation 181
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1561878849"
variation 182
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768919510"
variation 185
/gene="C6orf52"
/replace="a"
/replace="aa"
/db_xref="dbSNP:1467853240"
variation 186..187
/gene="C6orf52"
/replace="c"
/replace="cc"
/db_xref="dbSNP:1561878836"
variation 187
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1380231743"
variation 188
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1561878823"
variation 193
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1335660939"
variation 194
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:929353127"
variation 195
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1561878799"
variation 198
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:555595208"
variation 207
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:897004727"
variation 209
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1335825728"
variation 210
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1447332221"
variation 213
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1371755449"
variation 216
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:777617598"
variation 217
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:769387217"
variation 218
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:2127469296"
variation 222..223
/gene="C6orf52"
/replace=""
/replace="tg"
/db_xref="dbSNP:1460999259"
variation 223
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:1296430204"
variation 225
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1368572207"
variation 226
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1768916335"
variation 227
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1166388371"
variation 231
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1581557886"
variation 232
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:2127469282"
variation 233
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:540271409"
variation 235
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1768915571"
variation 236
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1036896839"
variation 238
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:941174563"
variation 239
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1384284358"
variation 240..244
/gene="C6orf52"
/replace="ttttt"
/replace="tttttt"
/db_xref="dbSNP:1561878638"
variation 240
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:1581557861"
variation 242
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:909842152"
variation 248
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:369274162"
variation 249
/gene="C6orf52"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:747885880"
variation 251
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1768913920"
variation 252
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:2127469257"
variation 258
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:937697706"
variation 259
/gene="C6orf52"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:927579123"
variation 271
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768913559"
variation 277
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1253228758"
variation 278
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1048825824"
variation 282
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1175146115"
variation 283
/gene="C6orf52"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1480314052"
variation 287
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1266127932"
variation 288
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1768912383"
variation 289
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768912220"
variation 290
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1429489908"
variation 292..293
/gene="C6orf52"
/replace=""
/replace="gtattaaaac"
/db_xref="dbSNP:1768911504"
variation 292
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1401925085"
exon 295..369
/gene="C6orf52"
/inference="alignment:Splign:2.1.0"
variation 295
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:374861955"
variation 297
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1768732101"
variation 298
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:979773728"
variation 301
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1482438331"
variation 302
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:953352236"
variation 303
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1581553967"
variation 304
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:1768730707"
variation 306
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768730468"
variation 307
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768730239"
variation 317
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:144587302"
variation 318
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768729647"
variation 320
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1581553945"
variation 324
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1189799564"
variation 325
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:956929592"
variation 328
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:142073017"
variation 330
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:745956003"
variation 331
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:1581553897"
variation 332
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1418992383"
variation 333
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1268746806"
variation 334
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1242268529"
variation 335
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:2127467688"
variation 336
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768727078"
variation 337
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768726864"
variation 338
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1768726650"
variation 342
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:971172313"
variation 344
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768726211"
variation 346
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1201650231"
misc_feature 352..354
/gene="C6orf52"
/note="upstream in-frame stop codon"
variation 356
/gene="C6orf52"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1581553839"
variation 358..360
/gene="C6orf52"
/replace="aa"
/replace="aaa"
/db_xref="dbSNP:1768725250"
variation 358
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1489894739"
variation 364
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1023687470"
variation 366
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1291247405"
CDS 367..648
/gene="C6orf52"
/note="isoform 2 is encoded by transcript variant 2"
/codon_start=1
/product="putative uncharacterized protein C6orf52 isoform
2"
/protein_id="NP_001341286.1"
/db_xref="CCDS:CCDS87364.1"
/db_xref="GeneID:347744"
/db_xref="HGNC:HGNC:20881"
/translation="
METTPLAENQDEDPLEVTSQYVAQADLKLPDLSNSLVSASQSVGVTDPHLHLNIEESNQEFMVKSEELYDSLMNCHWQPLDTVHSEIPDETPK"
misc_feature <373..630
/gene="C6orf52"
/note="Selenocysteine tRNA 1 associated proteins; Region:
Trnau1ap; pfam17654"
/db_xref="CDD:435948"
variation 368
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1217659088"
variation 369
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1176076074"
exon 370..415
/gene="C6orf52"
/inference="alignment:Splign:2.1.0"
variation 370
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1281106321"
variation 375
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:2127466492"
variation 377
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1453546511"
variation 378
/gene="C6orf52"
/replace=""
/replace="a"
/db_xref="dbSNP:1768561125"
variation 378
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1378697970"
variation 380
/gene="C6orf52"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1202256879"
variation 382
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1479474130"
variation 387
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:375308420"
variation 389
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1768559705"
variation 402
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1768559424"
variation 403
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1194585303"
variation 404
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:747994727"
variation 405
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:923343481"
variation 411
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:976201357"
variation 412
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:1019713743"
exon 416..505
/gene="C6orf52"
/inference="alignment:Splign:2.1.0"
variation 416
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1561863558"
variation 418
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1767532321"
variation 419
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:567194082"
variation 420
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:552068650"
variation 422
/gene="C6orf52"
/replace="c"
/replace="cc"
/db_xref="dbSNP:756604606"
variation 428
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1767531512"
variation 430
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1344294314"
variation 435
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1405087244"
variation 436
/gene="C6orf52"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1269188948"
variation 437
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1767530648"
variation 440
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1767530370"
variation 442
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:1767530115"
variation 443
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1767529856"
variation 445
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1245071549"
variation 451
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1683956784"
variation 453
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1383910227"
variation 455
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1339089336"
variation 456
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:908524605"
variation 467
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:146765215"
variation 476
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1405949311"
variation 477
/gene="C6orf52"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1330199977"
variation 478
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:1441273910"
variation 489
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1411679999"
variation 491
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1009754077"
variation 494
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:955633494"
variation 497
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1767526509"
variation 498
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1767526233"
variation 503
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1767525963"
variation 505
/gene="C6orf52"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1029753368"
exon 506..682
/gene="C6orf52"
/inference="alignment:Splign:2.1.0"
variation 507
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1408450766"
variation 508
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:745323628"
variation 510
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:925037349"
variation 511
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1767428241"
variation 514
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1767427954"
variation 519
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:778455811"
variation 525
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1199470373"
variation 527
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1581524535"
variation 531
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1012360030"
variation 532
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1767426142"
variation 539
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:773803043"
variation 543
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:544619456"
variation 547
/gene="C6orf52"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1359084211"
variation 552
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1561862442"
variation 554
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1767424581"
variation 555
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1767424319"
variation 562
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:540643184"
variation 565
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1767423782"
variation 569
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1285381628"
variation 570
/gene="C6orf52"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:753169660"
variation 571
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:979181635"
variation 573
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:3737278"
variation 574
/gene="C6orf52"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:922132631"
variation 575
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1439325849"
variation 576..578
/gene="C6orf52"
/replace="c"
/replace="ctc"
/db_xref="dbSNP:1350893088"
variation 576
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:887287256"
variation 578
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1347503461"
variation 582
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1356234729"
variation 584
/gene="C6orf52"
/replace="g"
/replace="t"
/db_xref="dbSNP:1225085574"
variation 585
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:976212417"
variation 586
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1581524347"
variation 588
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1767418398"
variation 593
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:748910695"
variation 595
/gene="C6orf52"
/replace="a"
/replace="t"
/db_xref="dbSNP:1321840235"
variation 597
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1301456907"
variation 600
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1767417300"
variation 605
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:2127457483"
variation 607
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1404581563"
variation 612
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1047707801"
variation 620
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:199719147"
variation 621
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:561653358"
variation 622
/gene="C6orf52"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1015089377"
variation 627
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:983863429"
variation 633..640
/gene="C6orf52"
/replace="tgagaccc"
/replace="tgagaccctgagaccc"
/db_xref="dbSNP:1470580399"
variation 635
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:540760855"
variation 638
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:2127457452"
variation 640
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:573372222"
variation 641
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1198139268"
variation 642
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:952048744"
variation 643
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1767413337"
variation 648..649
/gene="C6orf52"
/replace="a"
/replace="aa"
/db_xref="dbSNP:1427540396"
variation 649
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1767412836"
variation 652
/gene="C6orf52"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:760697081"
variation 655
/gene="C6orf52"
/replace="c"
/replace="g"
/db_xref="dbSNP:1767412316"
variation 660
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1218364360"
regulatory 661..666
/regulatory_class="polyA_signal_sequence"
/gene="C6orf52"
/note="hexamer: ATTAAA"
variation 661
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1315530402"
variation 667
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:141054814"
variation 669
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:770108290"
variation 670
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:41271785"
variation 671
/gene="C6orf52"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:761728993"
variation 674
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1328148809"
variation 677
/gene="C6orf52"
/replace="a"
/replace="c"
/db_xref="dbSNP:1767410026"
variation 678
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1404482371"
variation 679
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:72821565"
variation 680
/gene="C6orf52"
/replace="a"
/replace="g"
/db_xref="dbSNP:1290905289"
variation 681
/gene="C6orf52"
/replace="c"
/replace="t"
/db_xref="dbSNP:1767409014"
polyA_site 682
/gene="C6orf52"
/note="major polyA site"
ORIGIN
gattttccaagaagagaataagtaaagatgccacatgaggaggttctcactgcaaggagaaaaaaatcgggggcaagcaggcatatctcaggaagtctcccctctgctattagagtgaagcaggagttccagcccagccagagttaccgctatggcaactggtatgcgcgacagcacggctcttaccttctttctggctacagctatggctgtgcagtggatggaaatggaaaggactgtttttctgcgcatgagacccctgaacacacagctggaactctggttatgcctaagtgaccccctgtgccatctgcctgccatcctgctgggtgtcccctgttgggaagctgctgagtgaaattaaagatggaaaccacacctctagctgaaaaccaagatgaagacccactagaagtgacgtctcagtatgttgcccaggctgatctcaaactcccagatttaagcaattcactggtctcagcttcccaaagtgttggggttacagatccacatcttcatttgaatattgaggaatcaaaccaagagtttatggtgaaaagtgaagaactctacgactccctcatgaattgccactggcagcctctggacacagttcactccgaaatcccagatgagaccccgaagtgaagcaaggtgttcattaaactccgcaattatcata
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]